RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 LNPKQ9C0E8 428 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 SUSD2Q9UGT4 822 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 FNDC1Q4ZHG4 1894 aaPredicted RBP2.54□□□□□ -2
PRKD3-201ENST00000234179 CEP250Q9BV73 2442 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 A0A087WZ62 844 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 CDC25CP30307 473 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 EPHA5P54756 1037 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 CYP4A11Q02928 519 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 PPP2R5CQ13362 524 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 VEPH1Q14D04 833 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 UBE2SQ16763 222 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 PRR16Q569H4 304 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 PDZD4Q76G19 769 aaPredicted RBP2.53□□□□□ -2
PRKD3-201ENST00000234179 CD302Q8IX05 232 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 CEP76Q8TAP6 659 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 TRAPPC12Q8WVT3 735 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 FAM3CQ92520 227 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 ZC3H10Q96K80 434 aaKnown RBP2.53□□□□□ -2
PRKD3-201ENST00000234179 CEP170P1Q96L14 293 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 FDXACB1Q9BRP7 624 aaPredicted RBP2.53□□□□□ -2
PRKD3-201ENST00000234179 ASAH2Q9NR71 780 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 EPG5Q9HCE0 2579 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 CCDC194A0A1B0GVG4 234 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 EIF4E1BA6NMX2 242 aaKnown RBP2.53□□□□□ -2
PRKD3-201ENST00000234179 ALDH1A2O94788 518 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 DEXIO95424 95 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 THP07101 528 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 CEACAM1P13688 526 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 MFSD6LQ8IWD5 586 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 KRI1Q8N9T8 703 aaKnown RBP2.53□□□□□ -2
PRKD3-201ENST00000234179 OTUD7AQ8TE49 926 aaPredicted RBP2.53□□□□□ -2
PRKD3-201ENST00000234179 CCDC136Q96JN2 1154 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 IFT74Q96LB3 600 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 C17orf75Q9HAS0 396 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 SLC8A2Q9UPR5 921 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 PRG3Q9Y2Y8 225 aaPredicted RBP2.53□□□□□ -2
PRKD3-201ENST00000234179 TGM5O43548 720 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 PSMD10O75832 226 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 TDGF1P13385 188 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 DRD1P21728 446 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 IBSPP21815 317 aaPredicted RBP2.53□□□□□ -2
PRKD3-201ENST00000234179 FGFR3P22607 806 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 ANTXR2P58335 489 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 MYBPC2Q14324 1141 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 EMC2Q15006 297 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 SLC35G1Q2M3R5 365 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 SLC8B1Q6J4K2 584 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 FERMT3Q86UX7 667 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 MICU3Q86XE3 530 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 RHPN2Q8IUC4 686 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 NPAS3Q8IXF0 933 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 ZNF461Q8TAF7 563 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 FGF13Q92913 245 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 RAB34Q9BZG1 259 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 GBP3Q9H0R5 595 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 DSEQ9UL01 958 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 V9GY48 417 aaPredicted RBP2.53□□□□□ -2
PRKD3-201ENST00000234179 FANCMQ8IYD8 2048 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 TK2O00142 265 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 CPLX1O14810 134 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 PI15O43692 258 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 TYMPP19971 482 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 TUFMP49411 452 aaKnown RBP2.53□□□□□ -2
PRKD3-201ENST00000234179 EPHB3P54753 998 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 NLRP5P59047 1200 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 GPC5P78333 572 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 B3GNT9Q6UX72 402 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 TRMT11Q7Z4G4 463 aaKnown RBP2.53□□□□□ -2
PRKD3-201ENST00000234179 KCNV2Q8TDN2 545 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 NLRP4Q96MN2 994 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 MARCH5Q9NX47 278 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 PCDHA4Q9UN74 947 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 RBM19Q9Y4C8 960 aaKnown RBP2.53□□□□□ -2
PRKD3-201ENST00000234179 IPPQ9Y573 584 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 PIAS3Q9Y6X2 628 aa2.53□□□□□ -2
PRKD3-201ENST00000234179 PKD1L2Q7Z442 2459 aa2.53□□□□□ -2.01
PRKD3-201ENST00000234179 WDR27A2RRH5 827 aa2.53□□□□□ -2.01
PRKD3-201ENST00000234179 MSH4O15457 936 aa2.53□□□□□ -2.01
PRKD3-201ENST00000234179 REC8O95072 547 aa2.53□□□□□ -2.01
PRKD3-201ENST00000234179 PLEKHA8P1O95397 391 aa2.53□□□□□ -2.01
PRKD3-201ENST00000234179 ATP4AP20648 1035 aa2.53□□□□□ -2.01
PRKD3-201ENST00000234179 MARCKSP29966 332 aaPredicted RBP2.53□□□□□ -2.01
PRKD3-201ENST00000234179 MCM2P49736 904 aa2.53□□□□□ -2.01
PRKD3-201ENST00000234179 LAMTOR4Q0VGL1 99 aa2.53□□□□□ -2.01
PRKD3-201ENST00000234179 GRSF1Q12849 480 aaKnown RBP eCLIP2.53□□□□□ -2.01
PRKD3-201ENST00000234179 ZNF268Q14587 947 aaPredicted RBP2.53□□□□□ -2.01
PRKD3-201ENST00000234179 MAPK6Q16659 721 aa2.53□□□□□ -2.01
PRKD3-201ENST00000234179 TMEM132AQ24JP5 1023 aa2.53□□□□□ -2.01
PRKD3-201ENST00000234179 HAUS3Q68CZ6 603 aa2.53□□□□□ -2.01
PRKD3-201ENST00000234179 UNQ6494/PRO21346Q6UXR6 183 aa2.53□□□□□ -2.01
PRKD3-201ENST00000234179 TMC2Q8TDI7 906 aa2.53□□□□□ -2.01
PRKD3-201ENST00000234179 KIFAP3Q92845 792 aa2.53□□□□□ -2.01
PRKD3-201ENST00000234179 LSM14BQ9BX40 385 aaKnown RBP2.53□□□□□ -2.01
PRKD3-201ENST00000234179 LMAN1LQ9HAT1 526 aa2.53□□□□□ -2.01
PRKD3-201ENST00000234179 UXTQ9UBK9 157 aaPredicted RBP2.53□□□□□ -2.01
PRKD3-201ENST00000234179 STK36Q9NRP7 1315 aa2.53□□□□□ -2.01
PRKD3-201ENST00000234179 CHD8Q9HCK8 2581 aa2.53□□□□□ -2.01
PRKD3-201ENST00000234179 KLF18A0A0U1RQI7 1052 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 A0A1B0GUA9 196 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms