RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 TXNP10599 105 aaKnown RBP17.1■□□□□ 0.33
HDAC5-201ENST00000225983 COMTP21964 271 aa17.1■□□□□ 0.33
HDAC5-201ENST00000225983 EEF1B2P24534 225 aaKnown RBP17.1■□□□□ 0.33
HDAC5-201ENST00000225983 CDR2Q01850 454 aa17.1■□□□□ 0.33
HDAC5-201ENST00000225983 LCA5Q86VQ0 697 aa17.1■□□□□ 0.33
HDAC5-201ENST00000225983 MCEEQ96PE7 176 aa17.1■□□□□ 0.33
HDAC5-201ENST00000225983 GCOM2Q9BZD3 368 aaPredicted RBP17.1■□□□□ 0.33
HDAC5-201ENST00000225983 SIK2Q9H0K1 926 aa17.1■□□□□ 0.33
HDAC5-201ENST00000225983 VCPKMTQ9H867 229 aa17.1■□□□□ 0.33
HDAC5-201ENST00000225983 ZNRF3Q9ULT6 936 aa17.1■□□□□ 0.33
HDAC5-201ENST00000225983 ABT1Q9ULW3 272 aaKnown RBP17.1■□□□□ 0.33
HDAC5-201ENST00000225983 USP32Q8NFA0 1604 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 SMARCA1P28370 1054 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 COPB2P35606 906 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 NCOA4Q13772 614 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 BYSLQ13895 437 aaKnown RBP17.09■□□□□ 0.33
HDAC5-201ENST00000225983 NBPF9Q3BBW0 867 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 RFX8Q6ZV50 586 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 RBBP8NLQ8NC74 664 aaPredicted RBP17.09■□□□□ 0.33
HDAC5-201ENST00000225983 ZNF473Q8WTR7 871 aaKnown RBP17.09■□□□□ 0.33
HDAC5-201ENST00000225983 AGBL1Q96MI9 1066 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 EPN3Q9H201 632 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.09■□□□□ 0.33
HDAC5-201ENST00000225983 HPSEQ9Y251 543 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 PHF20L1A8MW92 1017 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 APOL1O14791 398 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 ZBTB24O43167 697 aaPredicted RBP17.09■□□□□ 0.33
HDAC5-201ENST00000225983 RGS7P49802 495 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 TAP1Q03518 808 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 PARD3BQ8TEW8 1205 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 C18orf8Q96DM3 657 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 ERGIC2Q96RQ1 377 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 TIPINQ9BVW5 301 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 TRABDQ9H4I3 376 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.09■□□□□ 0.33
HDAC5-201ENST00000225983 THEGQ9P2T0 379 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 PPME1Q9Y570 386 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 PAPOLAP51003 745 aaKnown RBP17.09■□□□□ 0.33
HDAC5-201ENST00000225983 PHEXP78562 749 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 TSPY1Q01534 308 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 FOXD4Q12950 439 aaPredicted RBP17.09■□□□□ 0.33
HDAC5-201ENST00000225983 PARP9Q8IXQ6 854 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 AGR3Q8TD06 166 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 RBM15Q96T37 977 aaKnown RBP eCLIP17.09■□□□□ 0.33
HDAC5-201ENST00000225983 PI4K2AQ9BTU6 479 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 STAT4Q14765 748 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 FSCBQ5H9T9 825 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 PRAMEF18Q5VWM3 479 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 INTS5Q6P9B9 1019 aaKnown RBP17.09■□□□□ 0.33
HDAC5-201ENST00000225983 FAM161BQ96MY7 647 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 ZIM3Q96PE6 472 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 SENP7Q9BQF6 1050 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 UPF3AQ9H1J1 476 aaKnown RBP17.09■□□□□ 0.33
HDAC5-201ENST00000225983 AGAP1Q9UPQ3 857 aa17.09■□□□□ 0.33
HDAC5-201ENST00000225983 KCNN4O15554 427 aa17.08■□□□□ 0.33
HDAC5-201ENST00000225983 ESRRGP62508 458 aa17.08■□□□□ 0.33
HDAC5-201ENST00000225983 ACAD11Q709F0 780 aa17.08■□□□□ 0.33
HDAC5-201ENST00000225983 ADGRA1Q86SQ6 560 aa17.08■□□□□ 0.33
HDAC5-201ENST00000225983 NOP9Q86U38 636 aaKnown RBP17.08■□□□□ 0.33
HDAC5-201ENST00000225983 JAMLQ86YT9 394 aa17.08■□□□□ 0.33
HDAC5-201ENST00000225983 USP38Q8NB14 1042 aa17.08■□□□□ 0.33
HDAC5-201ENST00000225983 MXRA8Q9BRK3 442 aa17.08■□□□□ 0.33
HDAC5-201ENST00000225983 FUCA2Q9BTY2 467 aa17.08■□□□□ 0.33
HDAC5-201ENST00000225983 TEX13BQ9BXU2 312 aa17.08■□□□□ 0.33
HDAC5-201ENST00000225983 SPATS2LQ9NUQ6 558 aaKnown RBP17.08■□□□□ 0.33
HDAC5-201ENST00000225983 LMNAP02545 664 aaKnown RBP17.08■□□□□ 0.33
HDAC5-201ENST00000225983 PDHA1P08559 390 aa17.08■□□□□ 0.33
HDAC5-201ENST00000225983 KRT10P13645 584 aa17.08■□□□□ 0.33
HDAC5-201ENST00000225983 EMC2Q15006 297 aa17.08■□□□□ 0.33
HDAC5-201ENST00000225983 RGS9BPQ6ZS82 235 aa17.08■□□□□ 0.33
HDAC5-201ENST00000225983 RCOR2Q8IZ40 523 aa17.08■□□□□ 0.33
HDAC5-201ENST00000225983 ANKS1AQ92625 1134 aa17.08■□□□□ 0.33
HDAC5-201ENST00000225983 CCDC138Q96M89 665 aa17.08■□□□□ 0.33
HDAC5-201ENST00000225983 ACAP3Q96P50 834 aa17.08■□□□□ 0.33
HDAC5-201ENST00000225983 CCT8L2Q96SF2 557 aa17.08■□□□□ 0.33
HDAC5-201ENST00000225983 ELP3Q9H9T3 547 aa17.08■□□□□ 0.33
HDAC5-201ENST00000225983 KCND2Q9NZV8 630 aa17.08■□□□□ 0.33
HDAC5-201ENST00000225983 ORC6Q9Y5N6 252 aa17.08■□□□□ 0.33
HDAC5-201ENST00000225983 EIF3HO15372 352 aaKnown RBP eCLIP17.08■□□□□ 0.32
HDAC5-201ENST00000225983 AGTP01019 485 aa17.08■□□□□ 0.32
HDAC5-201ENST00000225983 DAGLBQ8NCG7 672 aa17.08■□□□□ 0.32
HDAC5-201ENST00000225983 IFT43Q96FT9 208 aa17.08■□□□□ 0.32
HDAC5-201ENST00000225983 TMEM39BQ9GZU3 492 aa17.08■□□□□ 0.32
HDAC5-201ENST00000225983 CYP4F11Q9HBI6 524 aa17.08■□□□□ 0.32
HDAC5-201ENST00000225983 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.08■□□□□ 0.32
HDAC5-201ENST00000225983 DUSP10Q9Y6W6 482 aa17.08■□□□□ 0.32
HDAC5-201ENST00000225983 NPEPPSP55786 919 aa17.08■□□□□ 0.32
HDAC5-201ENST00000225983 VPS72Q15906 364 aa17.08■□□□□ 0.32
HDAC5-201ENST00000225983 RMDN2Q96LZ7 410 aa17.08■□□□□ 0.32
HDAC5-201ENST00000225983 PNKPQ96T60 521 aa17.08■□□□□ 0.32
HDAC5-201ENST00000225983 KDM6AO15550 1401 aaPredicted RBP17.07■□□□□ 0.32
HDAC5-201ENST00000225983 TYK2P29597 1187 aa17.07■□□□□ 0.32
HDAC5-201ENST00000225983 ELF1P32519 619 aa17.07■□□□□ 0.32
HDAC5-201ENST00000225983 KCNJ1P48048 391 aa17.07■□□□□ 0.32
HDAC5-201ENST00000225983 PRKCEQ02156 737 aa17.07■□□□□ 0.32
HDAC5-201ENST00000225983 AP1ARQ63HQ0 302 aa17.07■□□□□ 0.32
HDAC5-201ENST00000225983 ICE2Q659A1 982 aa17.07■□□□□ 0.32
HDAC5-201ENST00000225983 PID1Q7Z2X4 250 aa17.07■□□□□ 0.32
HDAC5-201ENST00000225983 SPATA21Q7Z572 469 aa17.07■□□□□ 0.32
HDAC5-201ENST00000225983 LPAR1Q92633 364 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms