RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 UvragQ8K245 698 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Atp2a1Q8R429 994 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Gimap4Q99JY3 219 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Asb11Q9CQ31 323 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Ddx20Q9JJY4 825 aaKnown RBP9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Myo1cQ9WTI7 1063 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Fut8Q9WTS2 575 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Myh13B1AR69 1938 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Gm6583E9Q8Z1 469 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Gm8298J3QPI0 401 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Vmn2r77L7N2B7 854 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Abcb1bP06795 1276 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 PrphP15331 475 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 MagohP61327 146 aaKnown RBP9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Zbtb8osQ505B7 168 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Cd180Q62192 661 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Q8BGC1 442 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Q8BGN9 141 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Efcab14Q8BGQ6 484 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 D630039A03RikQ8K0M7 236 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Pop1Q8K205 1045 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 IrgqQ8VIM9 583 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Usp11Q99K46 921 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 MagohbQ9CQL1 146 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Plod3Q9R0E1 741 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Hoxb8P09632 243 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Rad54lP70270 747 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Ect2Q07139 913 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Pou6f1Q07916 301 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 PrcpQ7TMR0 491 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Znf365Q8BG89 408 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Rint1Q8BZ36 792 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 OtoaQ8K561 1137 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 AdigQ8R400 80 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Slc35f6Q8VE96 372 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Ubxn2aQ99KJ0 258 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Tspan17Q9D7W4 270 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Scyl1Q9EQC5 806 aaKnown RBP9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Grk1Q9WVL4 564 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 EvplQ9D952 2035 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Mphosph8Q3TYA6 858 aaKnown RBP9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Otud5Q3U2S4 566 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 FcgrtQ61559 365 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 C2cd5Q7TPS5 1016 aaKnown RBP9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Tmem161bQ8C2L6 487 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 4933409G03RikQ8C5U0 320 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Ttc8Q8VD72 515 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 MlxiplQ99MZ3 864 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Bco2Q99NF1 532 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Rasgef1cQ9D300 466 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Cib2Q9Z309 187 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Scgb2b12S4R2L0 112 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Arhgef10Q8C033 1345 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Ccdc13D3YV10 709 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Birc5O70201 140 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Mt-CybP00158 381 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Phka1P18826 1241 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Klra1P20937 262 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Lpar1P61793 364 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Fbln1Q08879 705 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 TchpQ3TVW5 497 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Six2Q62232 296 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Cpa5Q8R4H4 436 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Ascc2Q91WR3 749 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Paip2Q9D6V8 124 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Morc1Q9WVL5 950 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Sned1Q70E20 1403 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Scp2P32020 547 aaKnown RBP9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Mfsd14aP70187 490 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Tll1Q62381 1013 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Garem2Q6PAJ3 880 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Lsm8Q6ZWM4 96 aaKnown RBP9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Dzip3Q7TPV2 1204 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Entpd3Q8BFW6 529 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Actl9Q8CG27 415 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Ndfip2Q91ZP6 311 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Sgk1Q9WVC6 431 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Speer3W4VSP1 261 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Mms22lB1AUR6 1238 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Ccdc24E9PUW8 296 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Sesn2P58043 480 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Tnfaip8l3Q3TBL6 204 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Gprin1Q3UNH4 932 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Ccdc110Q3V125 848 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Rhbdf1Q6PIX5 856 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 E2f7Q6S7F2 904 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Pgrmc2Q80UU9 217 aaKnown RBP9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Rusc1Q8BG26 893 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Syne4Q8CII8 388 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Mms19Q9D071 1031 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 IscuQ9D7P6 168 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Hsd3b7Q9EQC1 369 aa9.01□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Gm11985A0A1B0GS61 206 aa9□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Bpifb9bA2AJD1 591 aa9□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Fmr1P35922 614 aaKnown RBP9□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Cnga4Q3UW12 575 aa9□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Plppr4Q7TME0 766 aa9□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Bpifb9aQ80XI7 591 aa9□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Gpr150Q8BL07 427 aa9□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Adgra1Q8C4G9 578 aa9□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms