RNA–Protein interactions for RNA: YNL251C

NRD1, Transcript of RNA-binding subunit of Nrd1 complex, yeast

Gene NRD1, Length 1,728 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NRD1	YNL251C	SCL1	P21243	252 aa	Known RBP	4.8	□□□□□ -1.64
NRD1	YNL251C	PET18	P25362	215 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	ADH7	P25377	361 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	LAC1	P28496	418 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	CHS7	P38843	316 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	SUR2	P38992	349 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	SSN3	P39073	555 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	SMB1	P40018	196 aa	Known RBP	4.8	□□□□□ -1.64
NRD1	YNL251C	YER158C	P40095	573 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	MMF1	P40185	145 aa	Known RBP	4.8	□□□□□ -1.64
NRD1	YNL251C	GAT2	P40209	560 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	YIL060W	P40519	144 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	MOB2	P43563	287 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	SPO74	P45819	413 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	VPS25	P47142	202 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	MGA1	P53050	456 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	YGL101W	P53144	215 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	CSL4	P53859	292 aa	Predicted RBP	4.8	□□□□□ -1.64
NRD1	YNL251C	YNL134C	P53912	376 aa	Known RBP	4.8	□□□□□ -1.64
NRD1	YNL251C	SAE3	P89114	91 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	MRP51	Q02950	344 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	RCR2	Q03446	210 aa	Known RBP	4.8	□□□□□ -1.64
NRD1	YNL251C	RBS1	Q05672	457 aa	Known RBP	4.8	□□□□□ -1.64
NRD1	YNL251C	RRT7	Q07829	113 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	FDH1	Q08911	376 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	AHC1	Q12433	566 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	TPI1	P00942	248 aa	Known RBP	4.8	□□□□□ -1.64
NRD1	YNL251C	HIP1	P06775	603 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	CYT1	P07143	309 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	SGA1	P08019	549 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	YCR100C	P25606	316 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	COQ3	P27680	312 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	POP5	P28005	173 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	GMH1	P36125	273 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	OMA1	P36163	345 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	ALG14	P38242	237 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	LYS12	P40495	371 aa	Known RBP	4.8	□□□□□ -1.64
NRD1	YNL251C	ICE2	P40499	491 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	CIN5	P40917	295 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	AMA1	P50082	593 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	NSA1	P53136	463 aa	Predicted RBP	4.8	□□□□□ -1.64
NRD1	YNL251C	PRM1	P53835	661 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	PIR3	Q03180	325 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	TMA23	Q03525	211 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	YLR225C	Q05948	407 aa	Known RBP	4.8	□□□□□ -1.64
NRD1	YNL251C	CTR3	Q06686	241 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	REX4	Q08237	289 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	TGL5	Q12043	749 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	YLR118C	Q12354	227 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	AIM45	Q12480	344 aa	Known RBP	4.8	□□□□□ -1.64
NRD1	YNL251C	YLR146W-A	Q2V2P1	62 aa		4.8	□□□□□ -1.64
NRD1	YNL251C	RPL9A	P05738	191 aa	Known RBP	4.79	□□□□□ -1.64
NRD1	YNL251C	RPS9B	P05755	195 aa	Known RBP	4.79	□□□□□ -1.64
NRD1	YNL251C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
NRD1	YNL251C	STE4	P18851	423 aa		4.79	□□□□□ -1.64
NRD1	YNL251C	MIR1	P23641	311 aa	Known RBP	4.79	□□□□□ -1.64
NRD1	YNL251C	ATG15	P25641	520 aa		4.79	□□□□□ -1.64
NRD1	YNL251C	CSE2	P33308	149 aa		4.79	□□□□□ -1.64
NRD1	YNL251C	MRPL11	P36521	249 aa	Predicted RBP	4.79	□□□□□ -1.64
NRD1	YNL251C	MRPL27	P36526	146 aa	Predicted RBP	4.79	□□□□□ -1.64
NRD1	YNL251C	FAT1	P38225	669 aa		4.79	□□□□□ -1.64
NRD1	YNL251C	INM1	P38710	295 aa		4.79	□□□□□ -1.64
NRD1	YNL251C	YEL068C	P39977	110 aa		4.79	□□□□□ -1.64
NRD1	YNL251C	YJL068C	P40363	299 aa		4.79	□□□□□ -1.64
NRD1	YNL251C	CFD1	P40558	293 aa		4.79	□□□□□ -1.64
NRD1	YNL251C	OTU1	P43558	301 aa		4.79	□□□□□ -1.64
NRD1	YNL251C	EAF6	P47128	113 aa		4.79	□□□□□ -1.64
NRD1	YNL251C	OST3	P48439	350 aa		4.79	□□□□□ -1.64
NRD1	YNL251C	RPL9B	P51401	191 aa	Known RBP	4.79	□□□□□ -1.64
NRD1	YNL251C	NIF3	P53081	288 aa		4.79	□□□□□ -1.64
NRD1	YNL251C	SMX3	P54999	86 aa	Predicted RBP	4.79	□□□□□ -1.64
NRD1	YNL251C	SEC13	Q04491	297 aa	Known RBP	4.79	□□□□□ -1.64
NRD1	YNL251C	YMR074C	Q04773	145 aa		4.79	□□□□□ -1.64
NRD1	YNL251C	RSF1	Q05043	376 aa		4.79	□□□□□ -1.64
NRD1	YNL251C	BNA5	Q05979	453 aa		4.79	□□□□□ -1.64
NRD1	YNL251C	PDH1	Q12428	516 aa	Known RBP	4.79	□□□□□ -1.64
NRD1	YNL251C	PEX11	Q12462	236 aa		4.79	□□□□□ -1.64
NRD1	YNL251C	HTB1	P02293	131 aa	Known RBP	4.78	□□□□□ -1.64
NRD1	YNL251C	HTB2	P02294	131 aa		4.78	□□□□□ -1.64
NRD1	YNL251C	GAL4	P04386	881 aa		4.78	□□□□□ -1.64
NRD1	YNL251C	RIP1	P08067	215 aa		4.78	□□□□□ -1.64
NRD1	YNL251C	MET3	P08536	511 aa		4.78	□□□□□ -1.64
NRD1	YNL251C	TY2A-LR1	P0C2J4	438 aa		4.78	□□□□□ -1.64
NRD1	YNL251C	PAU19	P0CE85	124 aa		4.78	□□□□□ -1.64
NRD1	YNL251C	PAU21	P0CE86	164 aa		4.78	□□□□□ -1.64
NRD1	YNL251C	PAU22	P0CE87	164 aa		4.78	□□□□□ -1.64
NRD1	YNL251C	TY2A-F	P0CX61	438 aa		4.78	□□□□□ -1.64
NRD1	YNL251C	TY2A-GR2	P0CX62	438 aa		4.78	□□□□□ -1.64
NRD1	YNL251C	CPR4	P25334	318 aa		4.78	□□□□□ -1.64
NRD1	YNL251C	TY2A-C	P25383	438 aa		4.78	□□□□□ -1.64
NRD1	YNL251C	PAU3	P25610	124 aa		4.78	□□□□□ -1.64
NRD1	YNL251C	FUN19	P28003	413 aa	Predicted RBP	4.78	□□□□□ -1.64
NRD1	YNL251C	PPZ2	P33329	710 aa		4.78	□□□□□ -1.64
NRD1	YNL251C	AIM29	P36154	155 aa		4.78	□□□□□ -1.64
NRD1	YNL251C	CHK1	P38147	527 aa		4.78	□□□□□ -1.64
NRD1	YNL251C	TRS20	P38334	175 aa		4.78	□□□□□ -1.64
NRD1	YNL251C	FMP10	P40098	244 aa		4.78	□□□□□ -1.64
NRD1	YNL251C	SYS1	P41544	203 aa		4.78	□□□□□ -1.64
NRD1	YNL251C	CIN2	P46670	268 aa		4.78	□□□□□ -1.64
NRD1	YNL251C	YJR012C	P47087	207 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms