RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 HADHBP55084 474 aaKnown RBP18.26■□□□□ 0.51
PHGDH-229ENST00000641891 EEPD1Q7L9B9 569 aa18.26■□□□□ 0.51
PHGDH-229ENST00000641891 CEP89Q96ST8 783 aa18.26■□□□□ 0.51
PHGDH-229ENST00000641891 PAGR1Q9BTK6 254 aa18.26■□□□□ 0.51
PHGDH-229ENST00000641891 NEUROG2Q9H2A3 272 aa18.26■□□□□ 0.51
PHGDH-229ENST00000641891 DHX33Q9H6R0 707 aaKnown RBP18.26■□□□□ 0.51
PHGDH-229ENST00000641891 DICER1Q9UPY3 1922 aaKnown RBP18.26■□□□□ 0.51
PHGDH-229ENST00000641891 PTPRJQ12913 1337 aa18.26■□□□□ 0.51
PHGDH-229ENST00000641891 GSTTP1A0A1W2PQM5 241 aa18.25■□□□□ 0.51
PHGDH-229ENST00000641891 TTI1O43156 1089 aa18.25■□□□□ 0.51
PHGDH-229ENST00000641891 EXTL3O43909 919 aa18.25■□□□□ 0.51
PHGDH-229ENST00000641891 KRT5P13647 590 aa18.25■□□□□ 0.51
PHGDH-229ENST00000641891 HLTFQ14527 1009 aaKnown RBP eCLIP18.25■□□□□ 0.51
PHGDH-229ENST00000641891 MESDQ14696 234 aa18.25■□□□□ 0.51
PHGDH-229ENST00000641891 ZBTB41Q5SVQ8 909 aa18.25■□□□□ 0.51
PHGDH-229ENST00000641891 RIOX2Q8IUF8 465 aa18.25■□□□□ 0.51
PHGDH-229ENST00000641891 PIK3R5Q8WYR1 880 aa18.25■□□□□ 0.51
PHGDH-229ENST00000641891 DDX1Q92499 740 aaKnown RBP18.25■□□□□ 0.51
PHGDH-229ENST00000641891 PORCNQ9H237 461 aa18.25■□□□□ 0.51
PHGDH-229ENST00000641891 ELP3Q9H9T3 547 aa18.25■□□□□ 0.51
PHGDH-229ENST00000641891 ERVK-5Q9HDB9 667 aa18.25■□□□□ 0.51
PHGDH-229ENST00000641891 SRCAPQ6ZRS2 3230 aa18.25■□□□□ 0.51
PHGDH-229ENST00000641891 BHMG1C9JSJ3 638 aaPredicted RBP18.25■□□□□ 0.51
PHGDH-229ENST00000641891 FARP2O94887 1054 aaPredicted RBP18.25■□□□□ 0.51
PHGDH-229ENST00000641891 PDE6CP51160 858 aa18.25■□□□□ 0.51
PHGDH-229ENST00000641891 CDR2Q01850 454 aa18.25■□□□□ 0.51
PHGDH-229ENST00000641891 ALS2CLQ60I27 953 aa18.25■□□□□ 0.51
PHGDH-229ENST00000641891 C11orf63Q6NUN7 778 aa18.25■□□□□ 0.51
PHGDH-229ENST00000641891 ARL8AQ96BM9 186 aa18.25■□□□□ 0.51
PHGDH-229ENST00000641891 OTUD5Q96G74 571 aa18.25■□□□□ 0.51
PHGDH-229ENST00000641891 CLMNQ96JQ2 1002 aa18.25■□□□□ 0.51
PHGDH-229ENST00000641891 SPATC1LQ9H0A9 340 aa18.25■□□□□ 0.51
PHGDH-229ENST00000641891 TTC7AQ9ULT0 858 aaPredicted RBP18.25■□□□□ 0.51
PHGDH-229ENST00000641891 CSADQ9Y600 493 aa18.25■□□□□ 0.51
PHGDH-229ENST00000641891 GOLGA6CA6NDK9 693 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 IRF6O14896 467 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 GOLGA6DP0CG33 693 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 COMTP21964 271 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 ARL2P36404 184 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 HNRNPH2P55795 449 aaKnown RBP18.24■□□□□ 0.51
PHGDH-229ENST00000641891 STRN3Q13033 797 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 TTMPQ5BVD1 217 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 C15orf39Q6ZRI6 1047 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 MOB2Q70IA6 237 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 USP37Q86T82 979 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 GOLGA6L1Q8N7Z2 621 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 DEPTORQ8TB45 409 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 PSPC1Q8WXF1 523 aaKnown RBP18.24■□□□□ 0.51
PHGDH-229ENST00000641891 CARD9Q9H257 536 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 GOLGA6AQ9NYA3 693 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 AGO2Q9UKV8 859 aaKnown RBP18.24■□□□□ 0.51
PHGDH-229ENST00000641891 IGKV6D-21A0A0A0MT36 114 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 H0YCG3 227 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 GZMAP12544 262 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 SIP14410 1827 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 DRP2Q13474 957 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 TCEAL1Q15170 157 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 TDRD10Q5VZ19 366 aaKnown RBP18.24■□□□□ 0.51
PHGDH-229ENST00000641891 SPOPLQ6IQ16 392 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 CRELD2Q6UXH1 353 aaPredicted RBP18.24■□□□□ 0.51
PHGDH-229ENST00000641891 WHAMMQ8TF30 809 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 ZNF653Q96CK0 615 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 RUFY1Q96T51 708 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 TRIM51Q9BSJ1 452 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 NUP85Q9BW27 656 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 TARS2Q9BW92 718 aaKnown RBP18.24■□□□□ 0.51
PHGDH-229ENST00000641891 ANKFY1Q9P2R3 1169 aa18.24■□□□□ 0.51
PHGDH-229ENST00000641891 DAPK3O43293 454 aa18.23■□□□□ 0.51
PHGDH-229ENST00000641891 GRIN3BO60391 1043 aa18.23■□□□□ 0.51
PHGDH-229ENST00000641891 KRT14P02533 472 aa18.23■□□□□ 0.51
PHGDH-229ENST00000641891 TNNI1P19237 187 aa18.23■□□□□ 0.51
PHGDH-229ENST00000641891 EDNRBP24530 442 aa18.23■□□□□ 0.51
PHGDH-229ENST00000641891 PSMD6Q15008 389 aa18.23■□□□□ 0.51
PHGDH-229ENST00000641891 LY6KQ17RY6 165 aa18.23■□□□□ 0.51
PHGDH-229ENST00000641891 MREGQ8N565 214 aa18.23■□□□□ 0.51
PHGDH-229ENST00000641891 SLC7A3Q8WY07 619 aa18.23■□□□□ 0.51
PHGDH-229ENST00000641891 NIFKQ9BYG3 293 aaKnown RBP18.23■□□□□ 0.51
PHGDH-229ENST00000641891 SLITRK6Q9H5Y7 841 aa18.23■□□□□ 0.51
PHGDH-229ENST00000641891 NAMPTP43490 491 aa18.23■□□□□ 0.51
PHGDH-229ENST00000641891 POU5F1Q01860 360 aaKnown RBP18.23■□□□□ 0.51
PHGDH-229ENST00000641891 SEZ6Q53EL9 994 aa18.23■□□□□ 0.51
PHGDH-229ENST00000641891 CFAP58Q5T655 872 aa18.23■□□□□ 0.51
PHGDH-229ENST00000641891 IQCKQ8N0W5 287 aa18.23■□□□□ 0.51
PHGDH-229ENST00000641891 ZNF564Q8TBZ8 553 aaPredicted RBP18.23■□□□□ 0.51
PHGDH-229ENST00000641891 FNBP1Q96RU3 617 aa18.23■□□□□ 0.51
PHGDH-229ENST00000641891 ZSWIM1Q9BR11 485 aa18.23■□□□□ 0.51
PHGDH-229ENST00000641891 MAF1Q9H063 256 aa18.23■□□□□ 0.51
PHGDH-229ENST00000641891 C1orf112Q9NSG2 853 aa18.23■□□□□ 0.51
PHGDH-229ENST00000641891 FBXO40Q9UH90 709 aa18.23■□□□□ 0.51
PHGDH-229ENST00000641891 TRPC6Q9Y210 931 aa18.23■□□□□ 0.51
PHGDH-229ENST00000641891 DIS3Q9Y2L1 958 aaKnown RBP18.23■□□□□ 0.51
PHGDH-229ENST00000641891 STYXL1Q9Y6J8 313 aa18.23■□□□□ 0.51
PHGDH-229ENST00000641891 SBF1O95248 1867 aa18.22■□□□□ 0.51
PHGDH-229ENST00000641891 LRRC37A2A6NM11 1700 aa18.22■□□□□ 0.51
PHGDH-229ENST00000641891 CCDC66A2RUB6 948 aa18.22■□□□□ 0.51
PHGDH-229ENST00000641891 GOLGA8KD6RF30 607 aa18.22■□□□□ 0.51
PHGDH-229ENST00000641891 K7ERI5 159 aa18.22■□□□□ 0.51
PHGDH-229ENST00000641891 CNMDO75829 334 aa18.22■□□□□ 0.51
PHGDH-229ENST00000641891 HLA-DRAP01903 254 aa18.22■□□□□ 0.51
PHGDH-229ENST00000641891 CYP1A2P05177 515 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms