RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 HSDL1Q3SXM5 330 aa19.25■□□□□ 0.67
PHGDH-226ENST00000641756 GPAT2Q6NUI2 795 aa19.25■□□□□ 0.67
PHGDH-226ENST00000641756 CRELD2Q6UXH1 353 aaPredicted RBP19.25■□□□□ 0.67
PHGDH-226ENST00000641756 SND1Q7KZF4 910 aaKnown RBP eCLIP19.25■□□□□ 0.671e-7■■■□□ 18.8
PHGDH-226ENST00000641756 FBXO16Q8IX29 292 aaPredicted RBP19.25■□□□□ 0.67
PHGDH-226ENST00000641756 AFAP1L1Q8TED9 768 aa19.25■□□□□ 0.67
PHGDH-226ENST00000641756 GLG1Q92896 1179 aa19.25■□□□□ 0.67
PHGDH-226ENST00000641756 FNBP1Q96RU3 617 aa19.25■□□□□ 0.67
PHGDH-226ENST00000641756 AZI2Q9H6S1 392 aa19.25■□□□□ 0.67
PHGDH-226ENST00000641756 CTTNBP2NLQ9P2B4 639 aa19.25■□□□□ 0.67
PHGDH-226ENST00000641756 TMEM59LQ9UK28 342 aa19.25■□□□□ 0.67
PHGDH-226ENST00000641756 STYXL1Q9Y6J8 313 aa19.25■□□□□ 0.67
PHGDH-226ENST00000641756 PTPRJQ12913 1337 aa19.24■□□□□ 0.67
PHGDH-226ENST00000641756 ATMINO43313 823 aaPredicted RBP19.24■□□□□ 0.67
PHGDH-226ENST00000641756 RTN2O75298 545 aa19.24■□□□□ 0.67
PHGDH-226ENST00000641756 CYP11B1P15538 503 aa19.24■□□□□ 0.67
PHGDH-226ENST00000641756 OSBPP22059 807 aa19.24■□□□□ 0.67
PHGDH-226ENST00000641756 GUCY2DQ02846 1103 aa19.24■□□□□ 0.67
PHGDH-226ENST00000641756 KCTD2Q14681 263 aa19.24■□□□□ 0.67
PHGDH-226ENST00000641756 PSMD6Q15008 389 aa19.24■□□□□ 0.67
PHGDH-226ENST00000641756 SIP14410 1827 aa19.24■□□□□ 0.67
PHGDH-226ENST00000641756 PGRMC1O00264 195 aaKnown RBP19.24■□□□□ 0.67
PHGDH-226ENST00000641756 RAD51CO43502 376 aa19.24■□□□□ 0.67
PHGDH-226ENST00000641756 HARSP12081 509 aaKnown RBP19.24■□□□□ 0.67
PHGDH-226ENST00000641756 KRT5P13647 590 aa19.24■□□□□ 0.67
PHGDH-226ENST00000641756 GJA5P36382 358 aa19.24■□□□□ 0.67
PHGDH-226ENST00000641756 TNNC1P63316 161 aa19.24■□□□□ 0.67
PHGDH-226ENST00000641756 SEZ6Q53EL9 994 aa19.24■□□□□ 0.67
PHGDH-226ENST00000641756 TMEM63BQ5T3F8 832 aa19.24■□□□□ 0.67
PHGDH-226ENST00000641756 UBE2Q2Q8WVN8 375 aa19.24■□□□□ 0.67
PHGDH-226ENST00000641756 COPS5Q92905 334 aa19.24■□□□□ 0.67
PHGDH-226ENST00000641756 GPR20Q99678 358 aa19.24■□□□□ 0.67
PHGDH-226ENST00000641756 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.24■□□□□ 0.676e-10■■■■□ 22.4
PHGDH-226ENST00000641756 MSTO1Q9BUK6 570 aa19.24■□□□□ 0.67
PHGDH-226ENST00000641756 ACBD3Q9H3P7 528 aa19.24■□□□□ 0.67
PHGDH-226ENST00000641756 VIPAS39Q9H9C1 493 aa19.24■□□□□ 0.67
PHGDH-226ENST00000641756 KIAA1586Q9HCI6 787 aa19.24■□□□□ 0.67
PHGDH-226ENST00000641756 EPB41L5Q9HCM4 733 aa19.24■□□□□ 0.67
PHGDH-226ENST00000641756 DDX3YO15523 660 aaKnown RBP19.23■□□□□ 0.67
PHGDH-226ENST00000641756 MAFO75444 373 aaPredicted RBP19.23■□□□□ 0.67
PHGDH-226ENST00000641756 PIGRP01833 764 aa19.23■□□□□ 0.67
PHGDH-226ENST00000641756 PDE6CP51160 858 aa19.23■□□□□ 0.67
PHGDH-226ENST00000641756 GPC5P78333 572 aa19.23■□□□□ 0.67
PHGDH-226ENST00000641756 C15orf39Q6ZRI6 1047 aa19.23■□□□□ 0.67
PHGDH-226ENST00000641756 ZNF771Q7L3S4 317 aaPredicted RBP19.23■□□□□ 0.67
PHGDH-226ENST00000641756 FASTKD5Q7L8L6 764 aaKnown RBP19.23■□□□□ 0.67
PHGDH-226ENST00000641756 RHOT2Q8IXI1 618 aa19.23■□□□□ 0.67
PHGDH-226ENST00000641756 SCFD2Q8WU76 684 aa19.23■□□□□ 0.67
PHGDH-226ENST00000641756 PRPF31Q8WWY3 499 aaKnown RBP19.23■□□□□ 0.67
PHGDH-226ENST00000641756 MPHOSPH6Q99547 160 aaKnown RBP19.23■□□□□ 0.67
PHGDH-226ENST00000641756 RBAKQ9NYW8 714 aaPredicted RBP19.23■□□□□ 0.67
PHGDH-226ENST00000641756 TTLL13PA6NNM8 815 aa19.22■□□□□ 0.67
PHGDH-226ENST00000641756 TMEM110-MUSTN1A8MSY1 372 aa19.22■□□□□ 0.67
PHGDH-226ENST00000641756 NOP56O00567 594 aaKnown RBP19.22■□□□□ 0.67
PHGDH-226ENST00000641756 PHACTR2O75167 634 aa19.22■□□□□ 0.67
PHGDH-226ENST00000641756 BIRC3Q13489 604 aa19.22■□□□□ 0.67
PHGDH-226ENST00000641756 KCTD19Q17RG1 926 aaPredicted RBP19.22■□□□□ 0.67
PHGDH-226ENST00000641756 CELF3Q5SZQ8 465 aaKnown RBP19.22■□□□□ 0.67
PHGDH-226ENST00000641756 TDRD10Q5VZ19 366 aaKnown RBP19.22■□□□□ 0.67
PHGDH-226ENST00000641756 ARMC9Q7Z3E5 817 aa19.22■□□□□ 0.67
PHGDH-226ENST00000641756 ZC3H15Q8WU90 426 aaKnown RBP19.22■□□□□ 0.67
PHGDH-226ENST00000641756 L3MBTL3Q96JM7 780 aaPredicted RBP19.22■□□□□ 0.67
PHGDH-226ENST00000641756 GDF3Q9NR23 364 aa19.22■□□□□ 0.67
PHGDH-226ENST00000641756 MCM3APO60318 1980 aa19.22■□□□□ 0.67
PHGDH-226ENST00000641756 DNAJC25-GNG10A0A024R161 153 aa19.22■□□□□ 0.67
PHGDH-226ENST00000641756 ADCY3O60266 1144 aa19.22■□□□□ 0.67
PHGDH-226ENST00000641756 HLA-DRAP01903 254 aa19.22■□□□□ 0.67
PHGDH-226ENST00000641756 C4BPAP04003 597 aaKnown RBP19.22■□□□□ 0.67
PHGDH-226ENST00000641756 CYP2C8P10632 490 aa19.22■□□□□ 0.67
PHGDH-226ENST00000641756 PIK3CAP42336 1068 aa19.22■□□□□ 0.67
PHGDH-226ENST00000641756 CARSP49589 748 aaKnown RBP19.22■□□□□ 0.67
PHGDH-226ENST00000641756 ENPEPQ07075 957 aa19.22■□□□□ 0.67
PHGDH-226ENST00000641756 DCAF12L1Q5VU92 463 aa19.22■□□□□ 0.67
PHGDH-226ENST00000641756 SLFN12LQ6IEE8 588 aa19.22■□□□□ 0.67
PHGDH-226ENST00000641756 SPOPLQ6IQ16 392 aa19.22■□□□□ 0.67
PHGDH-226ENST00000641756 IFT20Q8IY31 132 aa19.22■□□□□ 0.67
PHGDH-226ENST00000641756 RASGEF1CQ8N431 466 aa19.22■□□□□ 0.67
PHGDH-226ENST00000641756 LRRC71Q8N4P6 559 aa19.22■□□□□ 0.67
PHGDH-226ENST00000641756 IFT81Q8WYA0 676 aa19.22■□□□□ 0.67
PHGDH-226ENST00000641756 C1orf112Q9NSG2 853 aa19.22■□□□□ 0.67
PHGDH-226ENST00000641756 VPS18Q9P253 973 aa19.22■□□□□ 0.67
PHGDH-226ENST00000641756 FAN1Q9Y2M0 1017 aa19.22■□□□□ 0.67
PHGDH-226ENST00000641756 ZC3H4Q9UPT8 1303 aaKnown RBP19.21■□□□□ 0.67
PHGDH-226ENST00000641756 ITGA4P13612 1032 aa19.21■□□□□ 0.67
PHGDH-226ENST00000641756 TNFRSF8P28908 595 aa19.21■□□□□ 0.67
PHGDH-226ENST00000641756 EPHB4P54760 987 aa19.21■□□□□ 0.67
PHGDH-226ENST00000641756 CLDN10P78369 228 aa19.21■□□□□ 0.67
PHGDH-226ENST00000641756 CDR2Q01850 454 aa19.21■□□□□ 0.67
PHGDH-226ENST00000641756 TRADDQ15628 312 aa19.21■□□□□ 0.67
PHGDH-226ENST00000641756 ZACNQ401N2 412 aa19.21■□□□□ 0.67
PHGDH-226ENST00000641756 HSP90B2PQ58FF3 399 aa19.21■□□□□ 0.67
PHGDH-226ENST00000641756 SPATA33Q96N06 139 aa19.21■□□□□ 0.67
PHGDH-226ENST00000641756 TMEM134Q9H6X4 195 aa19.21■□□□□ 0.67
PHGDH-226ENST00000641756 NFU1Q9UMS0 254 aa19.21■□□□□ 0.67
PHGDH-226ENST00000641756 ALG6Q9Y672 507 aa19.21■□□□□ 0.67
PHGDH-226ENST00000641756 ZNFX1Q9P2E3 1918 aaKnown RBP19.21■□□□□ 0.67
PHGDH-226ENST00000641756 A0A0B4J269 797 aa19.21■□□□□ 0.67
PHGDH-226ENST00000641756 KRIT1O00522 736 aa19.21■□□□□ 0.67
PHGDH-226ENST00000641756 SRGAP2CP0DJJ0 459 aa19.21■□□□□ 0.67
PHGDH-226ENST00000641756 GZMAP12544 262 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms