RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	TEPSIN	Q96N21	525 aa		18.06	■□□□□ 0.48
PHGDH-223	ENST00000641597	SELENOS	Q9BQE4	189 aa		18.06	■□□□□ 0.48
PHGDH-223	ENST00000641597	DDX23	Q9BUQ8	820 aa	Known RBP	18.06	■□□□□ 0.48
PHGDH-223	ENST00000641597	PABPC3	Q9H361	631 aa	Known RBP	18.06	■□□□□ 0.48
PHGDH-223	ENST00000641597	RPAP3	Q9H6T3	665 aa	Predicted RBP	18.06	■□□□□ 0.48
PHGDH-223	ENST00000641597	KMT5A	Q9NQR1	393 aa		18.06	■□□□□ 0.48
PHGDH-223	ENST00000641597	SYNGAP1	Q96PV0	1343 aa		18.06	■□□□□ 0.48
PHGDH-223	ENST00000641597	PRUNE1	Q86TP1	453 aa		18.05	■□□□□ 0.48
PHGDH-223	ENST00000641597	SLC13A5	Q86YT5	568 aa	Predicted RBP	18.05	■□□□□ 0.48
PHGDH-223	ENST00000641597	C12orf56	Q8IXR9	622 aa		18.05	■□□□□ 0.48
PHGDH-223	ENST00000641597	C4orf19	Q8IY42	314 aa		18.05	■□□□□ 0.48
PHGDH-223	ENST00000641597	ZNF516	Q92618	1163 aa		18.05	■□□□□ 0.48
PHGDH-223	ENST00000641597	HNRNPDL	O14979	420 aa	Known RBP	18.05	■□□□□ 0.48
PHGDH-223	ENST00000641597	TP73	O15350	636 aa		18.05	■□□□□ 0.48
PHGDH-223	ENST00000641597	RGS20	O76081	388 aa		18.05	■□□□□ 0.48
PHGDH-223	ENST00000641597	GJB6	O95452	261 aa		18.05	■□□□□ 0.48
PHGDH-223	ENST00000641597	RFX1	P22670	979 aa		18.05	■□□□□ 0.48
PHGDH-223	ENST00000641597	FNTA	P49354	379 aa		18.05	■□□□□ 0.48
PHGDH-223	ENST00000641597	NAP1L3	Q99457	506 aa	Predicted RBP	18.05	■□□□□ 0.48
PHGDH-223	ENST00000641597	ADAM7	Q9H2U9	754 aa		18.05	■□□□□ 0.48
PHGDH-223	ENST00000641597	MYOZ2	Q9NPC6	264 aa		18.05	■□□□□ 0.48
PHGDH-223	ENST00000641597	CHST7	Q9NS84	486 aa		18.05	■□□□□ 0.48
PHGDH-223	ENST00000641597	RAB20	Q9NX57	234 aa		18.05	■□□□□ 0.48
PHGDH-223	ENST00000641597	KIAA0754	O94854	1291 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	VPS41	P49754	854 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	MFAP3	P55082	362 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	HADHB	P55084	474 aa	Known RBP	18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	DMP1	Q13316	513 aa	Predicted RBP	18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	SEL1L2	Q5TEA6	688 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	AGBL2	Q5U5Z8	902 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	SWSAP1	Q6NVH7	229 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	TAS1R3	Q7RTX0	852 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	SAMD7	Q7Z3H4	446 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	PASD1	Q8IV76	773 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	TLCD1	Q96CP7	247 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	TBC1D22B	Q9NU19	505 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	PTPRJ	Q12913	1337 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	MIF4GD	A9UHW6	222 aa	Known RBP	18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	WDR64	B1ANS9	1081 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	WDR46	O15213	610 aa	Known RBP	18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	CP	P00450	1065 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	CHN1	P15882	459 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	COIL	P38432	576 aa	Predicted RBP	18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	CDR2	Q01850	454 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	SF3B2	Q13435	895 aa	Known RBP	18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	DHX34	Q14147	1143 aa	Known RBP	18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	SEZ6	Q53EL9	994 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	DENND2C	Q68D51	928 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	OTUD6A	Q7L8S5	288 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	FAM83A	Q86UY5	434 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	MCF2L2	Q86YR7	1114 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	MAP4K3	Q8IVH8	894 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	ARFGAP2	Q8N6H7	521 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	FBXL13	Q8NEE6	735 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	ZNF526	Q8TF50	670 aa	Predicted RBP	18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	ZKSCAN4	Q969J2	545 aa	Predicted RBP	18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	ANAPC7	Q9UJX3	599 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	ZNRF3	Q9ULT6	936 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	DIS3	Q9Y2L1	958 aa	Known RBP	18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	PSME4	Q14997	1843 aa		18.04	■□□□□ 0.48
PHGDH-223	ENST00000641597	P4HA2	O15460	535 aa		18.03	■□□□□ 0.48
PHGDH-223	ENST00000641597	LYPLA2	O95372	231 aa		18.03	■□□□□ 0.48
PHGDH-223	ENST00000641597	MAPT	P10636	758 aa	Known RBP	18.03	■□□□□ 0.48
PHGDH-223	ENST00000641597	CREB1	P16220	341 aa		18.03	■□□□□ 0.48
PHGDH-223	ENST00000641597	RRM1	P23921	792 aa		18.03	■□□□□ 0.48
PHGDH-223	ENST00000641597	CHRNA3	P32297	505 aa		18.03	■□□□□ 0.48
PHGDH-223	ENST00000641597	ACOT2	P49753	483 aa		18.03	■□□□□ 0.48
PHGDH-223	ENST00000641597	PDE6C	P51160	858 aa		18.03	■□□□□ 0.48
PHGDH-223	ENST00000641597	ZBTB41	Q5SVQ8	909 aa		18.03	■□□□□ 0.48
PHGDH-223	ENST00000641597	HEMGN	Q9BXL5	484 aa		18.03	■□□□□ 0.48
PHGDH-223	ENST00000641597	OSBPL7	Q9BZF2	842 aa		18.03	■□□□□ 0.48
PHGDH-223	ENST00000641597	CCDC113	Q9H0I3	377 aa		18.03	■□□□□ 0.48
PHGDH-223	ENST00000641597	XPNPEP1	Q9NQW7	623 aa		18.03	■□□□□ 0.48
PHGDH-223	ENST00000641597	LOXHD1	Q8IVV2	1947 aa		18.03	■□□□□ 0.48
PHGDH-223	ENST00000641597	FAM187A	A6NFU0	413 aa		18.03	■□□□□ 0.48
PHGDH-223	ENST00000641597		A6NNZ2	444 aa		18.03	■□□□□ 0.48
PHGDH-223	ENST00000641597	CYP1A2	P05177	515 aa		18.03	■□□□□ 0.48
PHGDH-223	ENST00000641597	IFNAR2	P48551	515 aa		18.03	■□□□□ 0.48
PHGDH-223	ENST00000641597	TUBB8	Q3ZCM7	444 aa		18.03	■□□□□ 0.48
PHGDH-223	ENST00000641597	C6orf89	Q6UWU4	347 aa		18.03	■□□□□ 0.48
PHGDH-223	ENST00000641597	PSPC1	Q8WXF1	523 aa	Known RBP	18.03	■□□□□ 0.48
PHGDH-223	ENST00000641597	NT5C1B	Q96P26	610 aa		18.03	■□□□□ 0.48
PHGDH-223	ENST00000641597	TMEM8A	Q9HCN3	771 aa		18.03	■□□□□ 0.48
PHGDH-223	ENST00000641597	PCYOX1	Q9UHG3	505 aa		18.03	■□□□□ 0.48
PHGDH-223	ENST00000641597	R3HDM2	Q9Y2K5	976 aa	Known RBP	18.03	■□□□□ 0.48
PHGDH-223	ENST00000641597	KIAA1217	Q5T5P2	1943 aa		18.02	■□□□□ 0.48
PHGDH-223	ENST00000641597	CTNND1	O60716	968 aa	Known RBP	18.02	■□□□□ 0.48
PHGDH-223	ENST00000641597	ACSL3	O95573	720 aa		18.02	■□□□□ 0.48
PHGDH-223	ENST00000641597	GZMA	P12544	262 aa		18.02	■□□□□ 0.48
PHGDH-223	ENST00000641597	NF2	P35240	595 aa		18.02	■□□□□ 0.48
PHGDH-223	ENST00000641597	CHKA	P35790	457 aa		18.02	■□□□□ 0.48
PHGDH-223	ENST00000641597	CYP24A1	Q07973	514 aa		18.02	■□□□□ 0.48
PHGDH-223	ENST00000641597	FSTL1	Q12841	308 aa		18.02	■□□□□ 0.48
PHGDH-223	ENST00000641597	NIPA1	Q7RTP0	329 aa		18.02	■□□□□ 0.48
PHGDH-223	ENST00000641597	CCDC60	Q8IWA6	550 aa	Predicted RBP	18.02	■□□□□ 0.48
PHGDH-223	ENST00000641597	NIM1K	Q8IY84	436 aa		18.02	■□□□□ 0.48
PHGDH-223	ENST00000641597	BICD1	Q96G01	975 aa		18.02	■□□□□ 0.48
PHGDH-223	ENST00000641597	SEC16B	Q96JE7	1060 aa		18.02	■□□□□ 0.48
PHGDH-223	ENST00000641597	ZBTB45	Q96K62	511 aa	Predicted RBP	18.02	■□□□□ 0.48
PHGDH-223	ENST00000641597	RPS6KC1	Q96S38	1066 aa		18.02	■□□□□ 0.48

Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms