RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 CAPNS1P04632 268 aa9.14□□□□□ -0.95
SCARB2-226ENST00000640916 FCARP24071 287 aa9.14□□□□□ -0.95
SCARB2-226ENST00000640916 TMOD1P28289 359 aa9.14□□□□□ -0.95
SCARB2-226ENST00000640916 CNR2P34972 360 aa9.14□□□□□ -0.95
SCARB2-226ENST00000640916 RAP1GAPP47736 663 aa9.14□□□□□ -0.95
SCARB2-226ENST00000640916 CXCL12P48061 93 aa9.14□□□□□ -0.95
SCARB2-226ENST00000640916 HNRNPUQ00839 825 aaKnown RBP eCLIP9.14□□□□□ -0.95
SCARB2-226ENST00000640916 FOXC1Q12948 553 aa9.14□□□□□ -0.95
SCARB2-226ENST00000640916 TANGO2Q6ICL3 276 aa9.14□□□□□ -0.95
SCARB2-226ENST00000640916 NIPA1Q7RTP0 329 aa9.14□□□□□ -0.95
SCARB2-226ENST00000640916 GPR65Q8IYL9 337 aa9.14□□□□□ -0.95
SCARB2-226ENST00000640916 CRYGNQ8WXF5 182 aa9.14□□□□□ -0.95
SCARB2-226ENST00000640916 RILPL2Q969X0 211 aa9.14□□□□□ -0.95
SCARB2-226ENST00000640916 IER2Q9BTL4 223 aa9.14□□□□□ -0.95
SCARB2-226ENST00000640916 GCOM2Q9BZD3 368 aaPredicted RBP9.14□□□□□ -0.95
SCARB2-226ENST00000640916 SMOC1Q9H4F8 434 aa9.14□□□□□ -0.95
SCARB2-226ENST00000640916 RSAD1Q9HA92 442 aa9.14□□□□□ -0.95
SCARB2-226ENST00000640916 KIAA1468Q9P260 1216 aa9.14□□□□□ -0.95
SCARB2-226ENST00000640916 KANSL3Q9P2N6 904 aa9.14□□□□□ -0.95
SCARB2-226ENST00000640916 DNMT3BQ9UBC3 853 aaKnown RBP9.14□□□□□ -0.95
SCARB2-226ENST00000640916 GABBR1Q9UBS5 961 aa9.14□□□□□ -0.95
SCARB2-226ENST00000640916 PIN4Q9Y237 131 aaKnown RBP9.14□□□□□ -0.95
SCARB2-226ENST00000640916 IGSF10Q6WRI0 2623 aa9.13□□□□□ -0.95
SCARB2-226ENST00000640916 IGKV6-21A0A0C4DH24 114 aa9.13□□□□□ -0.95
SCARB2-226ENST00000640916 IPO5O00410 1097 aaKnown RBP9.13□□□□□ -0.95
SCARB2-226ENST00000640916 CCL16O15467 120 aa9.13□□□□□ -0.95
SCARB2-226ENST00000640916 STBD1O95210 358 aa9.13□□□□□ -0.95
SCARB2-226ENST00000640916 HNRNPA1P09651 372 aaKnown RBP eCLIP9.13□□□□□ -0.95
SCARB2-226ENST00000640916 HOXA9P31269 272 aa9.13□□□□□ -0.95
SCARB2-226ENST00000640916 HOXA11P31270 313 aaPredicted RBP9.13□□□□□ -0.95
SCARB2-226ENST00000640916 SREBF1P36956 1147 aa9.13□□□□□ -0.95
SCARB2-226ENST00000640916 RAB27AP51159 221 aa9.13□□□□□ -0.95
SCARB2-226ENST00000640916 UGCGQ16739 394 aa9.13□□□□□ -0.95
SCARB2-226ENST00000640916 ANKRD45Q5TZF3 282 aa9.13□□□□□ -0.95
SCARB2-226ENST00000640916 ZNF746Q6NUN9 644 aaPredicted RBP9.13□□□□□ -0.95
SCARB2-226ENST00000640916 PRSS55Q6UWB4 352 aaPredicted RBP9.13□□□□□ -0.95
SCARB2-226ENST00000640916 CATIPQ7Z7H3 387 aa9.13□□□□□ -0.95
SCARB2-226ENST00000640916 LONP2Q86WA8 852 aa9.13□□□□□ -0.95
SCARB2-226ENST00000640916 SMG8Q8ND04 991 aaKnown RBP9.13□□□□□ -0.95
SCARB2-226ENST00000640916 URGCPQ8TCY9 931 aa9.13□□□□□ -0.95
SCARB2-226ENST00000640916 ING5Q8WYH8 240 aa9.13□□□□□ -0.95
SCARB2-226ENST00000640916 ZCCHC14Q8WYQ9 949 aaKnown RBP9.13□□□□□ -0.95
SCARB2-226ENST00000640916 DNASE1L2Q92874 299 aa9.13□□□□□ -0.95
SCARB2-226ENST00000640916 PGBD4Q96DM1 585 aa9.13□□□□□ -0.95
SCARB2-226ENST00000640916 FAM193BQ96PV7 902 aaPredicted RBP9.13□□□□□ -0.95
SCARB2-226ENST00000640916 CLSTN3Q9BQT9 956 aa9.13□□□□□ -0.95
SCARB2-226ENST00000640916 SCNM1Q9BWG6 230 aa9.13□□□□□ -0.95
SCARB2-226ENST00000640916 ANO3Q9BYT9 981 aa9.13□□□□□ -0.95
SCARB2-226ENST00000640916 SEC63Q9UGP8 760 aaKnown RBP9.13□□□□□ -0.95
SCARB2-226ENST00000640916 PCDHA10Q9Y5I2 948 aa9.13□□□□□ -0.95
SCARB2-226ENST00000640916 HELZ2Q9BYK8 2649 aaKnown RBP9.13□□□□□ -0.95
SCARB2-226ENST00000640916 ADAMTS3O15072 1205 aa9.12□□□□□ -0.95
SCARB2-226ENST00000640916 ADAM12O43184 909 aa9.12□□□□□ -0.95
SCARB2-226ENST00000640916 EPN2O95208 641 aa9.12□□□□□ -0.95
SCARB2-226ENST00000640916 OATP04181 439 aa9.12□□□□□ -0.95
SCARB2-226ENST00000640916 CYP21A2P08686 494 aa9.12□□□□□ -0.95
SCARB2-226ENST00000640916 POU2F2P09086 479 aa9.12□□□□□ -0.95
SCARB2-226ENST00000640916 SFPQP23246 707 aaKnown RBP eCLIP9.12□□□□□ -0.95
SCARB2-226ENST00000640916 OR1G1P47890 313 aa9.12□□□□□ -0.95
SCARB2-226ENST00000640916 CLK2P49760 499 aaKnown RBP9.12□□□□□ -0.95
SCARB2-226ENST00000640916 ZNF252P-AS1Q0IIN9 211 aa9.12□□□□□ -0.95
SCARB2-226ENST00000640916 PPP2R5DQ14738 602 aa9.12□□□□□ -0.95
SCARB2-226ENST00000640916 SLC5A9Q2M3M2 681 aa9.12□□□□□ -0.95
SCARB2-226ENST00000640916 HEATR6Q6AI08 1181 aaKnown RBP9.12□□□□□ -0.95
SCARB2-226ENST00000640916 PLA2G4DQ86XP0 818 aa9.12□□□□□ -0.95
SCARB2-226ENST00000640916 MAP4K3Q8IVH8 894 aa9.12□□□□□ -0.95
SCARB2-226ENST00000640916 KSR1Q8IVT5 923 aa9.12□□□□□ -0.95
SCARB2-226ENST00000640916 ZNF654Q8IZM8 581 aa9.12□□□□□ -0.95
SCARB2-226ENST00000640916 SPEM1Q8N4L4 309 aa9.12□□□□□ -0.95
SCARB2-226ENST00000640916 GSTCDQ8NEC7 633 aa9.12□□□□□ -0.95
SCARB2-226ENST00000640916 FAM3CQ92520 227 aa9.12□□□□□ -0.95
SCARB2-226ENST00000640916 ELSPBP1Q96BH3 223 aa9.12□□□□□ -0.95
SCARB2-226ENST00000640916 MCRS1Q96EZ8 462 aa9.12□□□□□ -0.95
SCARB2-226ENST00000640916 FAM167AQ96KS9 214 aa9.12□□□□□ -0.95
SCARB2-226ENST00000640916 SCLT1Q96NL6 688 aa9.12□□□□□ -0.95
SCARB2-226ENST00000640916 BBC3Q96PG8 261 aaPredicted RBP9.12□□□□□ -0.95
SCARB2-226ENST00000640916 IFT122Q9HBG6 1241 aa9.12□□□□□ -0.95
SCARB2-226ENST00000640916 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.12□□□□□ -0.95
SCARB2-226ENST00000640916 AGPAT5Q9NUQ2 364 aa9.12□□□□□ -0.95
SCARB2-226ENST00000640916 KCNH3Q9ULD8 1083 aa9.12□□□□□ -0.95
SCARB2-226ENST00000640916 NUP205Q92621 2012 aa9.12□□□□□ -0.95
SCARB2-226ENST00000640916 CELSR3Q9NYQ7 3312 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 PCNX2A6NKB5 2137 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 NCANO14594 1321 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 CNTNAP2Q9UHC6 1331 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 TMEM150BA6NC51 233 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 ARL5CA6NH57 179 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 MAN2B1O00754 1011 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 DDAH1O94760 285 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 C8AP07357 584 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 PSAPP07602 524 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 HOXA6P31267 233 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 NOVA1P51513 510 aaKnown RBP9.11□□□□□ -0.95
SCARB2-226ENST00000640916 PRKCEQ02156 737 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 GRM2Q14416 872 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 USP41Q3LFD5 358 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 RTP2Q5QGT7 225 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 PPM1LQ5SGD2 360 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 WWC2Q6AWC2 1192 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 TCEAL6Q6IPX3 200 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms