RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 OSBP2Q969R2 916 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 MAGEB5Q9BZ81 275 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 COA1Q9GZY4 146 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 AGAP1Q9UPQ3 857 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 AK9Q5TCS8 1911 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 BCAR1P56945 870 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 SCARF1Q14162 830 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 BEND6Q5SZJ8 279 aaPredicted RBP18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 IFNEQ86WN2 208 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 RIN3Q8TB24 985 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 NSUN6Q8TEA1 469 aaKnown RBP18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 H2AFY2Q9P0M6 372 aaPredicted RBP18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 THEGQ9P2T0 379 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 SPASTQ9UBP0 616 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 NEDD4P46934 1319 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 PP2D1A8MPX8 630 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 LDHAP00338 332 aaKnown RBP18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 CYTH1Q15438 398 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 MMS22LQ6ZRQ5 1243 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 COMMD2Q86X83 199 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 CEP95Q96GE4 821 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 LINC00854A0A1B0GVQ3 168 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 CCDC85CA6NKD9 419 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 C6orf10Q5SRN2 563 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 OOSP2Q86WS3 158 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 CARNMT1Q8N4J0 409 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 MRFAP1L1Q96HT8 127 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 CNOT7Q9UIV1 285 aaKnown RBP18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 ZNF197O14709 1029 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 LXNQ9BS40 222 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 PITPNM3Q9BZ71 974 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 NDOR1Q9UHB4 597 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 ANGPTL2Q9UKU9 493 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 JRKLQ9Y4A0 524 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 TRIM49P0CI25 452 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 TRIM49CP0CI26 452 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 THPOP40225 353 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 VAMP7P51809 220 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 MRFAP1Q9Y605 127 aa18.84■□□□□ 0.61
CACNA1A-227ENST00000636549 TRPC1P48995 793 aa18.83■□□□□ 0.61
CACNA1A-227ENST00000636549 ARL4CP56559 192 aa18.83■□□□□ 0.61
CACNA1A-227ENST00000636549 MTIF3Q9H2K0 278 aaKnown RBP18.83■□□□□ 0.61
CACNA1A-227ENST00000636549 ZFP69BQ9UJL9 534 aa18.83■□□□□ 0.61
CACNA1A-227ENST00000636549 HIST1H2AGP0C0S8 130 aaPredicted RBP18.83■□□□□ 0.61
CACNA1A-227ENST00000636549 HIST1H2ADP20671 130 aa18.83■□□□□ 0.61
CACNA1A-227ENST00000636549 ANGEL2Q5VTE6 544 aaKnown RBP18.83■□□□□ 0.61
CACNA1A-227ENST00000636549 GIMAP8Q8ND71 665 aaPredicted RBP18.83■□□□□ 0.61
CACNA1A-227ENST00000636549 ACSF2Q96CM8 615 aaPredicted RBP18.83■□□□□ 0.61
CACNA1A-227ENST00000636549 HIST1H2AHQ96KK5 128 aa18.83■□□□□ 0.61
CACNA1A-227ENST00000636549 HIST1H2AJQ99878 128 aa18.83■□□□□ 0.61
CACNA1A-227ENST00000636549 H2AFJQ9BTM1 129 aa18.83■□□□□ 0.61
CACNA1A-227ENST00000636549 APOL1O14791 398 aa18.83■□□□□ 0.61
CACNA1A-227ENST00000636549 FKBP3Q00688 224 aaKnown RBP18.83■□□□□ 0.61
CACNA1A-227ENST00000636549 DDX39BQ13838 428 aaKnown RBP18.83■□□□□ 0.61
CACNA1A-227ENST00000636549 GPT2Q8TD30 523 aa18.83■□□□□ 0.61
CACNA1A-227ENST00000636549 YME1L1Q96TA2 773 aa18.83■□□□□ 0.61
CACNA1A-227ENST00000636549 DDX28Q9NUL7 540 aaKnown RBP18.83■□□□□ 0.61
CACNA1A-227ENST00000636549 HACL1Q9UJ83 578 aa18.83■□□□□ 0.61
CACNA1A-227ENST00000636549 GLRA4Q5JXX5 417 aa18.83■□□□□ 0.6
CACNA1A-227ENST00000636549 ICA1LQ8NDH6 482 aa18.83■□□□□ 0.6
CACNA1A-227ENST00000636549 SLC9A2Q9UBY0 812 aa18.83■□□□□ 0.6
CACNA1A-227ENST00000636549 KRT7P08729 469 aa18.83■□□□□ 0.6
CACNA1A-227ENST00000636549 MYRIPQ8NFW9 859 aa18.83■□□□□ 0.6
CACNA1A-227ENST00000636549 SLC7A14Q8TBB6 771 aa18.83■□□□□ 0.6
CACNA1A-227ENST00000636549 DHTKD1Q96HY7 919 aaPredicted RBP18.83■□□□□ 0.6
CACNA1A-227ENST00000636549 MTMR6Q9Y217 621 aa18.83■□□□□ 0.6
CACNA1A-227ENST00000636549 PTRHD1Q6GMV3 140 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 ZNF564Q8TBZ8 553 aaPredicted RBP18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 UGGT2Q9NYU1 1516 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 COG1Q8WTW3 980 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 HAUS4Q9H6D7 363 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 ZNF229Q9UJW7 825 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 PCDHGA4Q9Y5G9 962 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 KPNA1P52294 538 aaPredicted RBP18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 CLEC10AQ8IUN9 316 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 CYGBQ8WWM9 190 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 GPR63Q9BZJ6 419 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 PARD3Q8TEW0 1356 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 ANKS6Q68DC2 871 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 LAYNQ6UX15 382 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 STX19Q8N4C7 294 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 FAM162AQ96A26 154 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 PNMA5Q96PV4 448 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 FOXP1Q9H334 677 aaPredicted RBP18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 ZSWIM6Q9HCJ5 1215 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 FGFR1P11362 822 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 FGD2Q7Z6J4 655 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 HPS3Q969F9 1004 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 IQCDQ96DY2 449 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 TSSK1BQ9BXA7 367 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 EXO5Q9H790 373 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 NEUROD4Q9HD90 331 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 TRIM10Q9UDY6 481 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 ATP10DQ9P241 1426 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 KCNQ2O43526 872 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 PARNO95453 639 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 NME5P56597 212 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 HPCAP84074 193 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 CDK17Q00537 523 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 IYDQ6PHW0 289 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms