RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 XKR3Q5GH77 459 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 MARCH10Q8NA82 808 aaPredicted RBP13.55□□□□□ -0.24
SCN8A-209ENST00000627620 TMEM143Q96AN5 459 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 NDUFB10O96000 172 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 HNRNPH2P55795 449 aaKnown RBP13.55□□□□□ -0.24
SCN8A-209ENST00000627620 POLE2P56282 527 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 DEUP1Q05D60 604 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 CACNB2Q08289 660 aaPredicted RBP13.55□□□□□ -0.24
SCN8A-209ENST00000627620 LRRC14Q15048 493 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 TTC23LQ6PF05 361 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 LRRC37BQ96QE4 947 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 TRPV6Q9H1D0 765 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 EPC1Q9H2F5 836 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 NOP53Q9NZM5 478 aaKnown RBP13.55□□□□□ -0.24
SCN8A-209ENST00000627620 TSR3Q9UJK0 312 aaKnown RBP13.55□□□□□ -0.24
SCN8A-209ENST00000627620 PIK3R2O00459 728 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 ZNF235Q14590 738 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 SBK1Q52WX2 424 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 ST13P4Q8IZP2 240 aaPredicted RBP13.55□□□□□ -0.24
SCN8A-209ENST00000627620 TEX13BQ9BXU2 312 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 FBXL5Q9UKA1 691 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 MRFAP1Q9Y605 127 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 TNPO2O14787 897 aaKnown RBP13.55□□□□□ -0.24
SCN8A-209ENST00000627620 PPP1R12AO14974 1030 aaPredicted RBP13.55□□□□□ -0.24
SCN8A-209ENST00000627620 SLC1A1P43005 524 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 ACOT2P49753 483 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 MTF1Q14872 753 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 IGDCC4Q8TDY8 1250 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 AFF4Q9UHB7 1163 aaKnown RBP13.55□□□□□ -0.24
SCN8A-209ENST00000627620 AMACRQ9UHK6 382 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 AGAP1Q9UPQ3 857 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 GLI2P10070 1586 aa13.55□□□□□ -0.24
SCN8A-209ENST00000627620 ALKQ9UM73 1620 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 ANKRD65E5RJM6 399 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 EIF3EP60228 445 aaKnown RBP13.54□□□□□ -0.24
SCN8A-209ENST00000627620 VEPH1Q14D04 833 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 FASTKD1Q53R41 847 aaKnown RBP13.54□□□□□ -0.24
SCN8A-209ENST00000627620 RMDN1Q96DB5 314 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 CEP19Q96LK0 163 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 NDFIP2Q9NV92 336 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 IQCA1LA6NCM1 817 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 ATP9BO43861 1147 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 DPF2Q92785 391 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 REEP2Q9BRK0 252 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 MAP3K20Q9NYL2 800 aaKnown RBP13.54□□□□□ -0.24
SCN8A-209ENST00000627620 GRIK1P39086 918 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 RAD51Q06609 339 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 TERF2Q15554 542 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 CLEC10AQ8IUN9 316 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 LPAR1Q92633 364 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 C18orf8Q96DM3 657 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 ATP6V1G3Q96LB4 118 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 MRPL40Q9NQ50 206 aaKnown RBP13.54□□□□□ -0.24
SCN8A-209ENST00000627620 APEX2Q9UBZ4 518 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 EFTUD2Q15029 972 aaKnown RBP eCLIP13.54□□□□□ -0.24
SCN8A-209ENST00000627620 RPAINQ86UA6 219 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 PLEKHA5Q9HAU0 1116 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 KLHL11Q9NVR0 708 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 CNOT7Q9UIV1 285 aaKnown RBP13.54□□□□□ -0.24
SCN8A-209ENST00000627620 ZNF609O15014 1411 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 HSD17B4P51659 736 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 SF3B3Q15393 1217 aaKnown RBP13.54□□□□□ -0.24
SCN8A-209ENST00000627620 AP1ARQ63HQ0 302 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 SPATA4Q8NEY3 305 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 NYAP2Q9P242 653 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 ZNF212Q9UDV6 495 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 TJP2Q9UDY2 1190 aa13.54□□□□□ -0.24
SCN8A-209ENST00000627620 TULP4Q9NRJ4 1543 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 SULT1E1P49888 294 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 EPAS1Q99814 870 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 C7orf25Q9BPX7 421 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 STK33Q9BYT3 514 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 A0A0G2JLW4 131 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 HNRNPCL2B2RXH8 293 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 HNRNPCL1O60812 293 aaKnown RBP13.53□□□□□ -0.24
SCN8A-209ENST00000627620 TPI1P60174 286 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 PRR5LQ6MZQ0 368 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 ADSSL1Q8N142 457 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 ATL2Q8NHH9 583 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 SLC30A5Q8TAD4 765 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 SPATS2LQ9NUQ6 558 aaKnown RBP13.53□□□□□ -0.24
SCN8A-209ENST00000627620 ADA2Q9NZK5 511 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 SNX9Q9Y5X1 595 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 USP31Q70CQ4 1352 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 DPYDQ12882 1025 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 HIF1AQ16665 826 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 CDC42EP5Q6NZY7 148 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 SPATA2LQ8IUW3 424 aaPredicted RBP13.53□□□□□ -0.24
SCN8A-209ENST00000627620 ZNF34Q8IZ26 560 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 APPL2Q8NEU8 664 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 ATXN7L3BQ96GX2 97 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 CLTCL1P53675 1640 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 FGFR4P22455 802 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 ACTR2P61160 394 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 RBP5P82980 135 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 RGS9BPQ6ZS82 235 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 NLRP14Q86W24 1093 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 CPA5Q8WXQ8 436 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 SH3KBP1Q96B97 665 aa13.53□□□□□ -0.24
SCN8A-209ENST00000627620 POLRMTO00411 1230 aaKnown RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms