RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 NCANO14594 1321 aa21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 A0A0B4J269 797 aa21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 ZMYND10O75800 440 aa21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 TNNI1P19237 187 aa21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 PAFAH1B1P43034 410 aa21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 MRPS25P82663 173 aaKnown RBP21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 LAMTOR4Q0VGL1 99 aa21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 IER5Q5VY09 327 aa21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 SLFN12LQ6IEE8 588 aa21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 WDR93Q6P2C0 686 aa21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 SLC35G2Q8TBE7 412 aa21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 HNRNPLLQ8WVV9 542 aaKnown RBP21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 CTNNBL1Q8WYA6 563 aaPredicted RBP21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 FNBP1Q96RU3 617 aa21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 HINFPQ9BQA5 517 aa21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 FUT8Q9BYC5 575 aa21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 RBAKQ9NYW8 714 aaPredicted RBP21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 ADGRA2Q96PE1 1338 aa21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 KIF4AO95239 1232 aa21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 GJB1P08034 283 aa21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 PLA2G4AP47712 749 aa21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 GTF2A2P52657 109 aa21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 CLDN10P78369 228 aa21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 CCNA1P78396 465 aa21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 ENPEPQ07075 957 aa21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 RPS6KA1Q15418 735 aa21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 MMGT1Q8N4V1 131 aa21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 SCFD2Q8WU76 684 aa21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 GTF3C2Q8WUA4 911 aaPredicted RBP21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 TRPC6Q9Y210 931 aa21.19■□□□□ 0.98
CHRNA4-209ENST00000627000 IGKV6-21A0A0C4DH24 114 aa21.18■□□□□ 0.98
CHRNA4-209ENST00000627000 GRIN3BO60391 1043 aa21.18■□□□□ 0.98
CHRNA4-209ENST00000627000 C4BPAP04003 597 aaKnown RBP21.18■□□□□ 0.98
CHRNA4-209ENST00000627000 SCP2P22307 547 aa21.18■□□□□ 0.98
CHRNA4-209ENST00000627000 RNASE9P60153 205 aaKnown RBP21.18■□□□□ 0.98
CHRNA4-209ENST00000627000 ITIH3Q06033 890 aa21.18■□□□□ 0.98
CHRNA4-209ENST00000627000 TDRD10Q5VZ19 366 aaKnown RBP21.18■□□□□ 0.98
CHRNA4-209ENST00000627000 TAPT1Q6NXT6 567 aa21.18■□□□□ 0.98
CHRNA4-209ENST00000627000 SLFN11Q7Z7L1 901 aa21.18■□□□□ 0.98
CHRNA4-209ENST00000627000 KRT222Q8N1A0 295 aa21.18■□□□□ 0.98
CHRNA4-209ENST00000627000 RNF149Q8NC42 400 aa21.18■□□□□ 0.98
CHRNA4-209ENST00000627000 RFFLQ8WZ73 363 aa21.18■□□□□ 0.98
CHRNA4-209ENST00000627000 GBA2Q9HCG7 927 aaPredicted RBP21.18■□□□□ 0.98
CHRNA4-209ENST00000627000 RBM12Q9NTZ6 932 aaKnown RBP21.18■□□□□ 0.98
CHRNA4-209ENST00000627000 DIS3Q9Y2L1 958 aaKnown RBP21.18■□□□□ 0.98
CHRNA4-209ENST00000627000 MSCO60682 206 aa21.17■□□□□ 0.98
CHRNA4-209ENST00000627000 CALCAP01258 141 aa21.17■□□□□ 0.98
CHRNA4-209ENST00000627000 ARHGAP1Q07960 439 aa21.17■□□□□ 0.98
CHRNA4-209ENST00000627000 ZACNQ401N2 412 aa21.17■□□□□ 0.98
CHRNA4-209ENST00000627000 CFAP221Q4G0U5 840 aa21.17■□□□□ 0.98
CHRNA4-209ENST00000627000 DAAM2Q86T65 1068 aa21.17■□□□□ 0.98
CHRNA4-209ENST00000627000 HDAC7Q8WUI4 952 aa21.17■□□□□ 0.98
CHRNA4-209ENST00000627000 LRRC1Q9BTT6 524 aa21.17■□□□□ 0.98
CHRNA4-209ENST00000627000 CCDC113Q9H0I3 377 aa21.17■□□□□ 0.98
CHRNA4-209ENST00000627000 SMARCAD1Q9H4L7 1026 aa21.17■□□□□ 0.98
CHRNA4-209ENST00000627000 ANKRD62A6NC57 917 aa21.17■□□□□ 0.98
CHRNA4-209ENST00000627000 KCNK3O14649 394 aa21.17■□□□□ 0.98
CHRNA4-209ENST00000627000 KIAA0391O15091 583 aaKnown RBP21.17■□□□□ 0.98
CHRNA4-209ENST00000627000 FTLP02792 175 aaPredicted RBP21.17■□□□□ 0.98
CHRNA4-209ENST00000627000 MMEP08473 750 aa21.17■□□□□ 0.98
CHRNA4-209ENST00000627000 ZBTB33Q86T24 672 aa21.17■□□□□ 0.98
CHRNA4-209ENST00000627000 RNPEPQ9H4A4 650 aa21.17■□□□□ 0.98
CHRNA4-209ENST00000627000 STXBP5LQ9Y2K9 1186 aa21.17■□□□□ 0.98
CHRNA4-209ENST00000627000 PPME1Q9Y570 386 aa21.17■□□□□ 0.98
CHRNA4-209ENST00000627000 EVPLQ92817 2033 aa21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 LOC102724159A0A0B4J2E5 919 aa21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 TARSL2A2RTX5 802 aaKnown RBP21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 UNCXA6NJT0 531 aa21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 BUB1BO60566 1050 aaPredicted RBP21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 ERLIN1O75477 346 aa21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 VNN1O95497 513 aa21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 HLA-DRAP01903 254 aa21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 PWP2Q15269 919 aaKnown RBP21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 CDCA2Q69YH5 1023 aaPredicted RBP21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 SPOPLQ6IQ16 392 aa21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 MAMDC4Q6UXC1 1216 aa21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 PEX26Q7Z412 305 aa21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 RHPN2Q8IUC4 686 aa21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 TCP11Q8WWU5 503 aa21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 SUCLA2Q9P2R7 463 aaPredicted RBP21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 COG5Q9UP83 839 aa21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 SLC45A1Q9Y2W3 748 aa21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 ATP8B1O43520 1251 aa21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 LDHAP00338 332 aaKnown RBP21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 ZBTB48P10074 688 aaPredicted RBP21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 CYP11B1P15538 503 aa21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 TNFSF9P41273 254 aa21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 FMO1Q01740 532 aa21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 BIRC3Q13489 604 aa21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 SCARA3Q6AZY7 606 aa21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 ANKRD23Q86SG2 305 aa21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 NT5DC3Q86UY8 548 aa21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 TAF4BQ92750 862 aa21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 ISCUQ9H1K1 167 aa21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 ST7Q9NRC1 585 aa21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 L1RE1Q9UN81 338 aa21.16■□□□□ 0.98
CHRNA4-209ENST00000627000 CNTNAP2Q9UHC6 1331 aa21.15■□□□□ 0.98
CHRNA4-209ENST00000627000 CLDN3O15551 220 aa21.15■□□□□ 0.98
CHRNA4-209ENST00000627000 CLCN3P51790 818 aa21.15■□□□□ 0.98
CHRNA4-209ENST00000627000 ZPBP2Q6X784 338 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms