RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 LLGL1Q15334 1064 aa12.87□□□□□ -0.35
TP53-227ENST00000622645 MTERF2Q49AM1 385 aa12.87□□□□□ -0.35
TP53-227ENST00000622645 CYFIP1Q7L576 1253 aa12.87□□□□□ -0.35
TP53-227ENST00000622645 GPD1LQ8N335 351 aa12.87□□□□□ -0.35
TP53-227ENST00000622645 UBL4BQ8N7F7 174 aa12.87□□□□□ -0.35
TP53-227ENST00000622645 ZNF564Q8TBZ8 553 aaPredicted RBP12.87□□□□□ -0.35
TP53-227ENST00000622645 TMC2Q8TDI7 906 aa12.87□□□□□ -0.35
TP53-227ENST00000622645 ZNF526Q8TF50 670 aaPredicted RBP12.87□□□□□ -0.35
TP53-227ENST00000622645 ZNF653Q96CK0 615 aa12.87□□□□□ -0.35
TP53-227ENST00000622645 C17orf75Q9HAS0 396 aa12.87□□□□□ -0.35
TP53-227ENST00000622645 TMBIM4Q9HC24 238 aa12.87□□□□□ -0.35
TP53-227ENST00000622645 FAM114A2Q9NRY5 505 aa12.87□□□□□ -0.35
TP53-227ENST00000622645 GOLGA6L10A6NI86 522 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 PEX10O60683 326 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 KRT5P13647 590 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 HPDP32754 393 aaPredicted RBP12.86□□□□□ -0.35
TP53-227ENST00000622645 PDE6CP51160 858 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 FSTL1Q12841 308 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 ABHD15Q6UXT9 468 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 KDM7AQ6ZMT4 941 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 C10orf67Q8IYJ2 551 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 PRELID2Q8N945 189 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 DDX1Q92499 740 aaKnown RBP12.86□□□□□ -0.35
TP53-227ENST00000622645 ZNF516Q92618 1163 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 ERP44Q9BS26 406 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 TEX13BQ9BXU2 312 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 POLR3FQ9H1D9 316 aaPredicted RBP12.86□□□□□ -0.35
TP53-227ENST00000622645 SYNGAP1Q96PV0 1343 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 TCRBV7S2A1N4TA0A589 114 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 GRIN3BO60391 1043 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 MYZAPP0CAP1 466 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 PRKG1Q13976 671 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 BRDTQ58F21 947 aaPredicted RBP12.86□□□□□ -0.35
TP53-227ENST00000622645 DUPD1Q68J44 220 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 LRIG3Q6UXM1 1119 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 JAMLQ86YT9 394 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 MCPH1Q8NEM0 835 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 RPS6KC1Q96S38 1066 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 RAB17Q9H0T7 212 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 ATP6V0A4Q9HBG4 840 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 LRRC4CQ9HCJ2 640 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 ATP8A1Q9Y2Q0 1164 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 SNX24Q9Y343 169 aa12.86□□□□□ -0.35
TP53-227ENST00000622645 HMGB1P1B2RPK0 211 aaPredicted RBP12.85□□□□□ -0.35
TP53-227ENST00000622645 MYO1FO00160 1098 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 SPOPO43791 374 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 OAZ1P54368 228 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 WNT7BP56706 349 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 CATSPERGQ6ZRH7 1159 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 CD101Q93033 1021 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 MAGOHBQ96A72 148 aaKnown RBP12.85□□□□□ -0.35
TP53-227ENST00000622645 TMEM143Q96AN5 459 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 FMO2Q99518 471 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 ACAD9Q9H845 621 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 BCCIPQ9P287 314 aaKnown RBP eCLIP12.85□□□□□ -0.35
TP53-227ENST00000622645 ARHGAP28Q9P2N2 729 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 SPATA31C2B4DYI2 1134 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 MTA2O94776 668 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 CYP1A2P05177 515 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 ACOT2P49753 483 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 PLTPP55058 493 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 TTC27Q6P3X3 843 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 USP37Q86T82 979 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 IFT74Q96LB3 600 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 C12orf42Q96LP6 360 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 GTF3C4Q9UKN8 822 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 FZD9O00144 591 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 DKC1O60832 514 aaKnown RBP eCLIP12.85□□□□□ -0.35
TP53-227ENST00000622645 ATP4AP20648 1035 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 GARTP22102 1010 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 PPP2R5EQ16537 467 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 C2CD6Q53TS8 623 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 PHLDB2Q86SQ0 1253 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 C1orf131Q8NDD1 294 aaKnown RBP12.85□□□□□ -0.35
TP53-227ENST00000622645 WNT8AQ9H1J5 351 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 ZDHHC18Q9NUE0 388 aa12.85□□□□□ -0.35
TP53-227ENST00000622645 CNOT8Q9UFF9 292 aaKnown RBP12.85□□□□□ -0.35
TP53-227ENST00000622645 COL11A1P12107 1806 aaPredicted RBP12.84□□□□□ -0.35
TP53-227ENST00000622645 ZNF541Q9H0D2 1346 aa12.84□□□□□ -0.35
TP53-227ENST00000622645 DOCK5Q9H7D0 1870 aa12.84□□□□□ -0.35
TP53-227ENST00000622645 SPDYE16A6NNV3 312 aaPredicted RBP12.84□□□□□ -0.35
TP53-227ENST00000622645 C19orf81C9J6K1 198 aa12.84□□□□□ -0.35
TP53-227ENST00000622645 KIAA0391O15091 583 aaKnown RBP12.84□□□□□ -0.35
TP53-227ENST00000622645 PHF2O75151 1096 aa12.84□□□□□ -0.35
TP53-227ENST00000622645 GTF2H1P32780 548 aa12.84□□□□□ -0.35
TP53-227ENST00000622645 LSP1P33241 339 aa12.84□□□□□ -0.35
TP53-227ENST00000622645 PTGIRP43119 386 aa12.84□□□□□ -0.35
TP53-227ENST00000622645 LIG4P49917 911 aa12.84□□□□□ -0.35
TP53-227ENST00000622645 POLGP54098 1239 aaPredicted RBP12.84□□□□□ -0.35
TP53-227ENST00000622645 CNTN2Q02246 1040 aa12.84□□□□□ -0.35
TP53-227ENST00000622645 MTMR3Q13615 1198 aa12.84□□□□□ -0.35
TP53-227ENST00000622645 GNPTABQ3T906 1256 aa12.84□□□□□ -0.35
TP53-227ENST00000622645 XKR3Q5GH77 459 aa12.84□□□□□ -0.35
TP53-227ENST00000622645 EMC10Q5UCC4 262 aa12.84□□□□□ -0.35
TP53-227ENST00000622645 ACAD10Q6JQN1 1059 aa12.84□□□□□ -0.35
TP53-227ENST00000622645 FBXO25Q8TCJ0 367 aa12.84□□□□□ -0.35
TP53-227ENST00000622645 TRPM4Q8TD43 1214 aa12.84□□□□□ -0.35
TP53-227ENST00000622645 KLRG1Q96E93 195 aa12.84□□□□□ -0.35
TP53-227ENST00000622645 CDHR1Q96JP9 859 aa12.84□□□□□ -0.35
TP53-227ENST00000622645 KIAA1217Q5T5P2 1943 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms