RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 PITPNM2Q9BZ72 1349 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 KANSL1LA0AUZ9 987 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 GYG2O15488 501 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 STRNO43815 780 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 CCDC22O60826 627 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 SERPINB7O75635 380 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 BAG2O95816 211 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 POTEIP0CG38 1075 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 PLCG2P16885 1265 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 USP11P51784 963 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 C1QTNF8P60827 252 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 PPIDQ08752 370 aaKnown RBP8.42□□□□□ -1.06
VPS11-209ENST00000622309 STRN3Q13033 797 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 TMTC3Q6ZXV5 915 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 CROCCP3Q8IVE0 287 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 ZBED8Q8IZ13 594 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 NUP93Q8N1F7 819 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 TTLL11Q8NHH1 800 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 ESR2Q92731 530 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 SEMA4AQ9H3S1 761 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 PIF1Q9H611 641 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 DKK3Q9UBP4 350 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 ZFP69BQ9UJL9 534 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 FAM32AQ9Y421 112 aaKnown RBP8.42□□□□□ -1.06
VPS11-209ENST00000622309 SLC12A7Q9Y666 1083 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 LMO7Q8WWI1 1683 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 PALLDQ8WX93 1383 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 POTEFA5A3E0 1075 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 BHMG1C9JSJ3 638 aaPredicted RBP8.42□□□□□ -1.06
VPS11-209ENST00000622309 TRAFD1O14545 582 aaPredicted RBP8.42□□□□□ -1.06
VPS11-209ENST00000622309 NDC80O14777 642 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 RNASEH1O60930 286 aaKnown RBP8.42□□□□□ -1.06
VPS11-209ENST00000622309 BRAFP15056 766 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 ACADVLP49748 655 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 ZBTB17Q13105 803 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 PPP2R5CQ13362 524 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 SEPT6Q14141 434 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 NTRK3Q16288 839 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 C6orf183Q5T699 404 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 NT5DC4Q86YG4 428 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 CDK5RAP3Q96JB5 506 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 SH3GL1Q99961 368 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 IER2Q9BTL4 223 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 METTL22Q9BUU2 404 aaPredicted RBP8.42□□□□□ -1.06
VPS11-209ENST00000622309 TMEM60Q9H2L4 133 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 EPB41L4BQ9H329 900 aa8.42□□□□□ -1.06
VPS11-209ENST00000622309 FBP2O00757 339 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 ALDH2P05091 517 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 T-ENOLP0DO92 83 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 EMP3P54852 163 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 NAA20P61599 178 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 IL9RQ01113 521 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 DR1Q01658 176 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 RELAQ04206 551 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 THOC5Q13769 683 aaKnown RBP8.41□□□□□ -1.06
VPS11-209ENST00000622309 SPIDRQ14159 915 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 TCEAL1Q15170 157 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 ZNF174Q15697 407 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 KCTD21Q4G0X4 260 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 TAF1BQ53T94 588 aaPredicted RBP8.41□□□□□ -1.06
VPS11-209ENST00000622309 CGB2Q6NT52 195 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 TTI2Q6NXR4 508 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 ACAD11Q709F0 780 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 CYB5R4Q7L1T6 521 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 RELL1Q8IUW5 271 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 SYT2Q8N9I0 419 aaPredicted RBP8.41□□□□□ -1.06
VPS11-209ENST00000622309 OXER1Q8TDS5 423 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 SEC14L1Q92503 715 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 SETDB2Q96T68 719 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 CCT7Q99832 543 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 NDE1Q9NXR1 346 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 STX8Q9UNK0 236 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 TRAF3IP3Q9Y228 551 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 TBC1D30Q9Y2I9 924 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 SNX24Q9Y343 169 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 TRIM17Q9Y577 477 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 WASF2Q9Y6W5 498 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 PNPLA7Q6ZV29 1317 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 ARHGAP10A1A4S6 786 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 EPHB6O15197 1021 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 MTA2O94776 668 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 PGM3O95394 542 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 OXSR1O95747 527 aaPredicted RBP8.41□□□□□ -1.06
VPS11-209ENST00000622309 FGFR4P22455 802 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 GUCY1A2P33402 732 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 MAP3K10Q02779 954 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 ADRM1Q16186 407 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 TMEM67Q5HYA8 995 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 C6orf163Q5TEZ5 329 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 LMBR1LQ6UX01 489 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 C3orf62Q6ZUJ4 267 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 PEX26Q7Z412 305 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 RASSF3Q86WH2 238 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 CRACR2BQ8N4Y2 399 aaPredicted RBP8.41□□□□□ -1.06
VPS11-209ENST00000622309 METTL13Q8N6R0 699 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 ERP44Q9BS26 406 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 TMEM109Q9BVC6 243 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 CADM1Q9BY67 442 aaKnown RBP8.41□□□□□ -1.06
VPS11-209ENST00000622309 PDGFDQ9GZP0 370 aaPredicted RBP8.41□□□□□ -1.06
VPS11-209ENST00000622309 EPB41L1Q9H4G0 881 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms