RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 STYXL1Q9Y6J8 313 aa14.48□□□□□ -0.09
MDC1-209ENST00000613547 INPPL1O15357 1258 aa14.47□□□□□ -0.09
MDC1-209ENST00000613547 LDHAP00338 332 aaKnown RBP14.47□□□□□ -0.09
MDC1-209ENST00000613547 LAG3P18627 525 aa14.47□□□□□ -0.09
MDC1-209ENST00000613547 PTMSP20962 102 aa14.47□□□□□ -0.09
MDC1-209ENST00000613547 GARTP22102 1010 aa14.47□□□□□ -0.09
MDC1-209ENST00000613547 CTNNB1P35222 781 aa14.47□□□□□ -0.09
MDC1-209ENST00000613547 CAMK4Q16566 473 aa14.47□□□□□ -0.09
MDC1-209ENST00000613547 KNOP1Q1ED39 458 aaKnown RBP14.47□□□□□ -0.09
MDC1-209ENST00000613547 ARMCX5Q6P1M9 558 aa14.47□□□□□ -0.09
MDC1-209ENST00000613547 CEP120Q8N960 986 aa14.47□□□□□ -0.09
MDC1-209ENST00000613547 KIAA0895Q8NCT3 520 aa14.47□□□□□ -0.09
MDC1-209ENST00000613547 CLP1Q92989 425 aaKnown RBP14.47□□□□□ -0.09
MDC1-209ENST00000613547 ZFP42Q96MM3 310 aa14.47□□□□□ -0.09
MDC1-209ENST00000613547 NUP62CLQ9H1M0 184 aa14.47□□□□□ -0.09
MDC1-209ENST00000613547 CLSTN2Q9H4D0 955 aa14.47□□□□□ -0.09
MDC1-209ENST00000613547 TBC1D13Q9NVG8 400 aa14.47□□□□□ -0.09
MDC1-209ENST00000613547 KLK14Q9P0G3 267 aa14.47□□□□□ -0.09
MDC1-209ENST00000613547 PCDHB12Q9Y5F1 795 aa14.47□□□□□ -0.09
MDC1-209ENST00000613547 MRPL42Q9Y6G3 142 aaKnown RBP14.47□□□□□ -0.09
MDC1-209ENST00000613547 MYH11P35749 1972 aa14.46□□□□□ -0.09
MDC1-209ENST00000613547 TISP43B9A030 160 aa14.46□□□□□ -0.09
MDC1-209ENST00000613547 POMCP01189 267 aa14.46□□□□□ -0.09
MDC1-209ENST00000613547 MCM4P33991 863 aa14.46□□□□□ -0.09
MDC1-209ENST00000613547 PPM1AP35813 382 aa14.46□□□□□ -0.09
MDC1-209ENST00000613547 BMPR1AP36894 532 aa14.46□□□□□ -0.09
MDC1-209ENST00000613547 PPP1R2P41236 205 aa14.46□□□□□ -0.09
MDC1-209ENST00000613547 ALDH7A1P49419 539 aaKnown RBP14.46□□□□□ -0.09
MDC1-209ENST00000613547 SCNN1GP51170 649 aa14.46□□□□□ -0.09
MDC1-209ENST00000613547 ERVK-21P61565 698 aa14.46□□□□□ -0.09
MDC1-209ENST00000613547 GRIK3Q13003 919 aa14.46□□□□□ -0.09
MDC1-209ENST00000613547 STIM1Q13586 685 aa14.46□□□□□ -0.09
MDC1-209ENST00000613547 ZNF658Q5TYW1 1059 aaPredicted RBP14.46□□□□□ -0.09
MDC1-209ENST00000613547 SLC39A4Q6P5W5 647 aa14.46□□□□□ -0.09
MDC1-209ENST00000613547 TMEM192Q8IY95 271 aa14.46□□□□□ -0.09
MDC1-209ENST00000613547 GUF1Q8N442 669 aaKnown RBP14.46□□□□□ -0.09
MDC1-209ENST00000613547 ARNTL2Q8WYA1 636 aa14.46□□□□□ -0.09
MDC1-209ENST00000613547 ZNF558Q96NG5 402 aa14.46□□□□□ -0.09
MDC1-209ENST00000613547 RPF1Q9H9Y2 349 aaKnown RBP14.46□□□□□ -0.09
MDC1-209ENST00000613547 AGPAT3Q9NRZ7 376 aa14.46□□□□□ -0.09
MDC1-209ENST00000613547 MTUS1Q9ULD2 1270 aa14.46□□□□□ -0.09
MDC1-209ENST00000613547 ZC3H11AO75152 810 aaKnown RBP eCLIP14.45□□□□□ -0.1
MDC1-209ENST00000613547 RB1P06400 928 aa14.45□□□□□ -0.1
MDC1-209ENST00000613547 THP07101 528 aa14.45□□□□□ -0.1
MDC1-209ENST00000613547 ADSSP30520 456 aa14.45□□□□□ -0.1
MDC1-209ENST00000613547 POU5F1Q01860 360 aaKnown RBP14.45□□□□□ -0.1
MDC1-209ENST00000613547 PPP2R3AQ06190 1150 aa14.45□□□□□ -0.1
MDC1-209ENST00000613547 EPC2Q52LR7 807 aa14.45□□□□□ -0.1
MDC1-209ENST00000613547 CD302Q8IX05 232 aa14.45□□□□□ -0.1
MDC1-209ENST00000613547 FBXO22Q8NEZ5 403 aa14.45□□□□□ -0.1
MDC1-209ENST00000613547 ERCC4Q92889 916 aaPredicted RBP14.45□□□□□ -0.1
MDC1-209ENST00000613547 SNX27Q96L92 541 aa14.45□□□□□ -0.1
MDC1-209ENST00000613547 C17orf80Q9BSJ5 609 aa14.45□□□□□ -0.1
MDC1-209ENST00000613547 C11orf84Q9BUA3 381 aaPredicted RBP14.45□□□□□ -0.1
MDC1-209ENST00000613547 PLVAPQ9BX97 442 aa14.45□□□□□ -0.1
MDC1-209ENST00000613547 HAPLN2Q9GZV7 340 aa14.45□□□□□ -0.1
MDC1-209ENST00000613547 IKZF4Q9H2S9 585 aa14.45□□□□□ -0.1
MDC1-209ENST00000613547 PLEKHA5Q9HAU0 1116 aa14.45□□□□□ -0.1
MDC1-209ENST00000613547 KIAA1586Q9HCI6 787 aa14.45□□□□□ -0.1
MDC1-209ENST00000613547 KIAA1468Q9P260 1216 aa14.45□□□□□ -0.1
MDC1-209ENST00000613547 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.45□□□□□ -0.1
MDC1-209ENST00000613547 PDXKO00764 312 aa14.44□□□□□ -0.1
MDC1-209ENST00000613547 EXTL3O43909 919 aa14.44□□□□□ -0.1
MDC1-209ENST00000613547 ARHGEF15O94989 841 aa14.44□□□□□ -0.1
MDC1-209ENST00000613547 HOXD13P35453 343 aa14.44□□□□□ -0.1
MDC1-209ENST00000613547 SEZ6Q53EL9 994 aa14.44□□□□□ -0.1
MDC1-209ENST00000613547 KCNT2Q6UVM3 1135 aa14.44□□□□□ -0.1
MDC1-209ENST00000613547 LRRC55Q6ZSA7 311 aa14.44□□□□□ -0.1
MDC1-209ENST00000613547 GPD1LQ8N335 351 aa14.44□□□□□ -0.1
MDC1-209ENST00000613547 DEFB123Q8N688 67 aa14.44□□□□□ -0.1
MDC1-209ENST00000613547 TRIML1Q8N9V2 468 aa14.44□□□□□ -0.1
MDC1-209ENST00000613547 COLGALT1Q8NBJ5 622 aa14.44□□□□□ -0.1
MDC1-209ENST00000613547 NOC3LQ8WTT2 800 aaKnown RBP14.44□□□□□ -0.1
MDC1-209ENST00000613547 TSPAN18Q96SJ8 248 aa14.44□□□□□ -0.1
MDC1-209ENST00000613547 CBWD1Q9BRT8 395 aa14.44□□□□□ -0.1
MDC1-209ENST00000613547 FAM213AQ9BRX8 229 aa14.44□□□□□ -0.1
MDC1-209ENST00000613547 TMEM175Q9BSA9 504 aa14.44□□□□□ -0.1
MDC1-209ENST00000613547 TTYH1Q9H313 450 aaPredicted RBP14.44□□□□□ -0.1
MDC1-209ENST00000613547 SEMA6BQ9H3T3 888 aa14.44□□□□□ -0.1
MDC1-209ENST00000613547 CWH43Q9H720 699 aa14.44□□□□□ -0.1
MDC1-209ENST00000613547 CERS4Q9HA82 394 aa14.44□□□□□ -0.1
MDC1-209ENST00000613547 SLC38A7Q9NVC3 462 aa14.44□□□□□ -0.1
MDC1-209ENST00000613547 CNTN3Q9P232 1028 aa14.44□□□□□ -0.1
MDC1-209ENST00000613547 CPSF3Q9UKF6 684 aaKnown RBP14.44□□□□□ -0.1
MDC1-209ENST00000613547 MAN1B1Q9UKM7 699 aa14.44□□□□□ -0.1
MDC1-209ENST00000613547 PTPRSQ13332 1948 aa14.43□□□□□ -0.1
MDC1-209ENST00000613547 C5orf67F2Z3F1 127 aa14.43□□□□□ -0.1
MDC1-209ENST00000613547 TGFB1I1O43294 461 aa14.43□□□□□ -0.1
MDC1-209ENST00000613547 XPOTO43592 962 aaKnown RBP14.43□□□□□ -0.1
MDC1-209ENST00000613547 CALUO43852 315 aaPredicted RBP14.43□□□□□ -0.1
MDC1-209ENST00000613547 FAM189A1O60320 539 aa14.43□□□□□ -0.1
MDC1-209ENST00000613547 ALDH2P05091 517 aa14.43□□□□□ -0.1
MDC1-209ENST00000613547 CXCL8P10145 99 aa14.43□□□□□ -0.1
MDC1-209ENST00000613547 TNFSF9P41273 254 aa14.43□□□□□ -0.1
MDC1-209ENST00000613547 ACOT2P49753 483 aa14.43□□□□□ -0.1
MDC1-209ENST00000613547 ENOX2Q16206 610 aaKnown RBP14.43□□□□□ -0.1
MDC1-209ENST00000613547 COBLL1Q53SF7 1204 aa14.43□□□□□ -0.1
MDC1-209ENST00000613547 C12orf56Q8IXR9 622 aa14.43□□□□□ -0.1
MDC1-209ENST00000613547 XXYLT1Q8NBI6 393 aa14.43□□□□□ -0.1
MDC1-209ENST00000613547 GPT2Q8TD30 523 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms