RNA–Protein interactions for RNA: ENST00000613098.4

PPARGC1A-217, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1A, Length 3,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-217ENST00000613098 KIF2BQ8N4N8 673 aa7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 CCDC63Q8NA47 563 aa7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 ATG4AQ8WYN0 398 aa7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 FAM84AQ96KN4 292 aa7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 WNT8AQ9H1J5 351 aa7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 SEL1LQ9UBV2 794 aa7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 BAIAP2L1Q9UHR4 511 aa7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 TMEM150BA6NC51 233 aa7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 IGF2BP3O00425 579 aaKnown RBP eCLIP7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 PPEF1O14829 653 aaPredicted RBP7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 PMM2O15305 246 aa7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 GGPS1O95749 300 aa7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 RPSAP08865 295 aaKnown RBP7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 DLATP10515 647 aaKnown RBP7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 FGFR1P11362 822 aa7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 ITGB5P18084 799 aa7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 PAX7P23759 505 aa7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 VAMP7P51809 220 aa7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 PRELPP51888 382 aa7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 KLF1Q13351 362 aaPredicted RBP7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 NSMCE1Q8WV22 266 aa7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 SHC3Q92529 594 aa7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 ARHGEF2Q92974 986 aaKnown RBP7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 NUP85Q9BW27 656 aa7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 ROPN1BQ9BZX4 212 aaPredicted RBP7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 ROPN1Q9HAT0 212 aaPredicted RBP7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 ARHGEF10LQ9HCE6 1279 aa7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 SEPT11Q9NVA2 429 aaKnown RBP7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 FRMD4BQ9Y2L6 1034 aa7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 USP15Q9Y4E8 981 aaPredicted RBP7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 CEP83Q9Y592 693 aa7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 ZNF536O15090 1300 aa7.98□□□□□ -1.13
PPARGC1A-217ENST00000613098 EXOC3O60645 756 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 TCEA3O75764 348 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 ACSL3O95573 720 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 VIMP08670 466 aaKnown RBP7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 VIL1P09327 827 aaKnown RBP7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 CLTAP09496 248 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 CCNB1P14635 433 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 GM2AP17900 193 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 WDR4P57081 412 aaKnown RBP7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 SETQ01105 290 aaPredicted RBP7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 MYBPC2Q14324 1141 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 SLMAPQ14BN4 828 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 NSMFQ6X4W1 530 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 RNF207Q6ZRF8 634 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 ECHDC2Q86YB7 292 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 C12orf56Q8IXR9 622 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 TEKT1Q969V4 418 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 SH2D3AQ9BRG2 576 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 LXNQ9BS40 222 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 ECT2Q9H8V3 914 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 VEZTQ9HBM0 779 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 SLC5A4Q9NY91 659 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 ADAM22Q9P0K1 906 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 WHRNQ9P202 907 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 PI4KBQ9UBF8 816 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 C15orf41Q9Y2V0 281 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 STK24Q9Y6E0 443 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 MROH7Q68CQ1 1323 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 ATRNL1Q5VV63 1379 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 COL11A2P13942 1736 aaPredicted RBP7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 TTC4O95801 387 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 HLA-DOAP06340 250 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 BMP3P12645 472 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 CYP11B1P15538 503 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 HSPA6P17066 643 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 RFX1P22670 979 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 CDC25CP30307 473 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 KRT17Q04695 432 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 KYNUQ16719 465 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 MSL1Q68DK7 614 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 TRMT10CQ7L0Y3 403 aaKnown RBP7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 ERICH1Q86X53 443 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 ZNF564Q8TBZ8 553 aaPredicted RBP7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 MGARPQ8TDB4 240 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 MAML1Q92585 1016 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 DHX38Q92620 1227 aaKnown RBP7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 THOC1Q96FV9 657 aaKnown RBP7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 DDX27Q96GQ7 796 aaKnown RBP7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 SERPINB12Q96P63 405 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 DNAJC17Q9NVM6 304 aaKnown RBP7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 COL20A1Q9P218 1284 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 MYH11P35749 1972 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 TAC1P20366 129 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 SLC8A1P32418 973 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 ABL2P42684 1182 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 PDE6CP51160 858 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 COPS2P61201 443 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 MYO1EQ12965 1108 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 RASA3Q14644 834 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 SLC39A4Q6P5W5 647 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 EP400NLQ6ZTU2 488 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 TMEM179Q6ZVK1 233 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 CCDC105Q8IYK2 499 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 UBL4BQ8N7F7 174 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 GLIS1Q8NBF1 620 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 ACER1Q8TDN7 264 aa7.97□□□□□ -1.13
PPARGC1A-217ENST00000613098 NINJ2Q9NZG7 142 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms