RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 ZMYM2Q9UBW7 1377 aa13.51□□□□□ -0.25
CTSA-210ENST00000606000 ABLIM1O14639 778 aa13.51□□□□□ -0.25
CTSA-210ENST00000606000 MEFVO15553 781 aaPredicted RBP13.51□□□□□ -0.25
CTSA-210ENST00000606000 WEE2P0C1S8 567 aa13.51□□□□□ -0.25
CTSA-210ENST00000606000 HARSP12081 509 aaKnown RBP13.51□□□□□ -0.25
CTSA-210ENST00000606000 IGFBP6P24592 240 aaPredicted RBP13.51□□□□□ -0.25
CTSA-210ENST00000606000 NAB2Q15742 525 aa13.51□□□□□ -0.25
CTSA-210ENST00000606000 DCAF4L1Q3SXM0 396 aa13.51□□□□□ -0.25
CTSA-210ENST00000606000 ZNF568Q3ZCX4 644 aa13.51□□□□□ -0.25
CTSA-210ENST00000606000 SEZ6Q53EL9 994 aa13.51□□□□□ -0.25
CTSA-210ENST00000606000 TMEM184AQ6ZMB5 413 aa13.51□□□□□ -0.25
CTSA-210ENST00000606000 ADHFE1Q8IWW8 467 aa13.51□□□□□ -0.25
CTSA-210ENST00000606000 C12orf76Q8N812 135 aaPredicted RBP13.51□□□□□ -0.25
CTSA-210ENST00000606000 TMEM161BQ8NDZ6 487 aa13.51□□□□□ -0.25
CTSA-210ENST00000606000 ZBTB45Q96K62 511 aaPredicted RBP13.51□□□□□ -0.25
CTSA-210ENST00000606000 TIPINQ9BVW5 301 aa13.51□□□□□ -0.25
CTSA-210ENST00000606000 MRPL4Q9BYD3 311 aaKnown RBP13.51□□□□□ -0.25
CTSA-210ENST00000606000 GPR62Q9BZJ7 368 aa13.51□□□□□ -0.25
CTSA-210ENST00000606000 S1PR5Q9H228 398 aa13.51□□□□□ -0.25
CTSA-210ENST00000606000 TMEM134Q9H6X4 195 aa13.51□□□□□ -0.25
CTSA-210ENST00000606000 PTPRHQ9HD43 1115 aa13.51□□□□□ -0.25
CTSA-210ENST00000606000 FAM50BQ9Y247 325 aa13.51□□□□□ -0.25
CTSA-210ENST00000606000 TNFSF13BQ9Y275 285 aa13.51□□□□□ -0.25
CTSA-210ENST00000606000 IRAK3Q9Y616 596 aa13.51□□□□□ -0.25
CTSA-210ENST00000606000 PDCD11Q14690 1871 aaKnown RBP13.5□□□□□ -0.25
CTSA-210ENST00000606000 C19orf67A6NJJ6 358 aa13.5□□□□□ -0.25
CTSA-210ENST00000606000 LILRB3O75022 631 aa13.5□□□□□ -0.25
CTSA-210ENST00000606000 KIF4AO95239 1232 aa13.5□□□□□ -0.25
CTSA-210ENST00000606000 SOD2P04179 222 aa13.5□□□□□ -0.25
CTSA-210ENST00000606000 CNPP09543 421 aaKnown RBP13.5□□□□□ -0.25
CTSA-210ENST00000606000 MYBP10242 640 aa13.5□□□□□ -0.25
CTSA-210ENST00000606000 MAPTP10636 758 aaKnown RBP13.5□□□□□ -0.25
CTSA-210ENST00000606000 SP100P23497 879 aaPredicted RBP13.5□□□□□ -0.25
CTSA-210ENST00000606000 PKP1Q13835 747 aa13.5□□□□□ -0.25
CTSA-210ENST00000606000 FOXD4L6Q3SYB3 417 aaPredicted RBP13.5□□□□□ -0.25
CTSA-210ENST00000606000 FUT10Q6P4F1 479 aa13.5□□□□□ -0.25
CTSA-210ENST00000606000 FOXD4L3Q6VB84 417 aaPredicted RBP13.5□□□□□ -0.25
CTSA-210ENST00000606000 TMEM130Q8N3G9 435 aa13.5□□□□□ -0.25
CTSA-210ENST00000606000 SLC22A17Q8WUG5 538 aa13.5□□□□□ -0.25
CTSA-210ENST00000606000 SUSD6Q92537 303 aa13.5□□□□□ -0.25
CTSA-210ENST00000606000 CASP10Q92851 521 aa13.5□□□□□ -0.25
CTSA-210ENST00000606000 KLHL5Q96PQ7 755 aa13.5□□□□□ -0.25
CTSA-210ENST00000606000 CCSER1Q9C0I3 900 aa13.5□□□□□ -0.25
CTSA-210ENST00000606000 C17orf75Q9HAS0 396 aa13.5□□□□□ -0.25
CTSA-210ENST00000606000 GOLGA2P5Q9HBQ8 144 aa13.5□□□□□ -0.25
CTSA-210ENST00000606000 ANKFY1Q9P2R3 1169 aa13.5□□□□□ -0.25
CTSA-210ENST00000606000 PRKAG3Q9UGI9 489 aa13.5□□□□□ -0.25
CTSA-210ENST00000606000 SRPRBQ9Y5M8 271 aaKnown RBP13.5□□□□□ -0.25
CTSA-210ENST00000606000 VWA8A3KMH1 1905 aa13.49□□□□□ -0.25
CTSA-210ENST00000606000 DENND4AQ7Z401 1863 aa13.49□□□□□ -0.25
CTSA-210ENST00000606000 A0A087X0B3 334 aa13.49□□□□□ -0.25
CTSA-210ENST00000606000 CARNS1A5YM72 827 aa13.49□□□□□ -0.25
CTSA-210ENST00000606000 FAM86C2PA6NEL3 165 aa13.49□□□□□ -0.25
CTSA-210ENST00000606000 SLC26A4O43511 780 aa13.49□□□□□ -0.25
CTSA-210ENST00000606000 URODP06132 367 aa13.49□□□□□ -0.25
CTSA-210ENST00000606000 SRGAP2BP0DMP2 458 aa13.49□□□□□ -0.25
CTSA-210ENST00000606000 PROZP22891 400 aa13.49□□□□□ -0.25
CTSA-210ENST00000606000 GRM5P41594 1212 aa13.49□□□□□ -0.25
CTSA-210ENST00000606000 GLUD2P49448 558 aa13.49□□□□□ -0.25
CTSA-210ENST00000606000 NCKAP1LP55160 1127 aa13.49□□□□□ -0.25
CTSA-210ENST00000606000 TUSC3Q13454 348 aa13.49□□□□□ -0.25
CTSA-210ENST00000606000 GIT2Q14161 759 aa13.49□□□□□ -0.25
CTSA-210ENST00000606000 HSP90AA2PQ14568 343 aaPredicted RBP13.49□□□□□ -0.25
CTSA-210ENST00000606000 RARS2Q5T160 578 aaKnown RBP13.49□□□□□ -0.25
CTSA-210ENST00000606000 GLYCTKQ8IVS8 523 aa13.49□□□□□ -0.25
CTSA-210ENST00000606000 KCTD17Q8N5Z5 321 aa13.49□□□□□ -0.25
CTSA-210ENST00000606000 SPIRE2Q8WWL2 714 aa13.49□□□□□ -0.25
CTSA-210ENST00000606000 LARP4BQ92615 738 aaKnown RBP13.49□□□□□ -0.25
CTSA-210ENST00000606000 NTPCRQ9BSD7 190 aaKnown RBP13.49□□□□□ -0.25
CTSA-210ENST00000606000 COLEC11Q9BWP8 271 aa13.49□□□□□ -0.25
CTSA-210ENST00000606000 HAPLN2Q9GZV7 340 aa13.49□□□□□ -0.25
CTSA-210ENST00000606000 ZHX3Q9H4I2 956 aa13.49□□□□□ -0.25
CTSA-210ENST00000606000 MRPL17Q9NRX2 175 aaKnown RBP13.49□□□□□ -0.25
CTSA-210ENST00000606000 KCND2Q9NZV8 630 aa13.49□□□□□ -0.25
CTSA-210ENST00000606000 ADAM28Q9UKQ2 775 aa13.49□□□□□ -0.25
CTSA-210ENST00000606000 RBM19Q9Y4C8 960 aaKnown RBP13.49□□□□□ -0.25
CTSA-210ENST00000606000 C2orf16Q68DN1 1984 aa13.49□□□□□ -0.25
CTSA-210ENST00000606000 FSD2A1L4K1 749 aa13.48□□□□□ -0.25
CTSA-210ENST00000606000 K7ENM7 598 aa13.48□□□□□ -0.25
CTSA-210ENST00000606000 FAM13AO94988 1023 aa13.48□□□□□ -0.25
CTSA-210ENST00000606000 KRT18P05783 430 aaKnown RBP13.48□□□□□ -0.25
CTSA-210ENST00000606000 THP07101 528 aa13.48□□□□□ -0.25
CTSA-210ENST00000606000 CLCN4P51793 760 aa13.48□□□□□ -0.25
CTSA-210ENST00000606000 SOX4Q06945 474 aaPredicted RBP13.48□□□□□ -0.25
CTSA-210ENST00000606000 STRN3Q13033 797 aa13.48□□□□□ -0.25
CTSA-210ENST00000606000 BMS1Q14692 1282 aaKnown RBP13.48□□□□□ -0.25
CTSA-210ENST00000606000 SLC39A14Q15043 492 aa13.48□□□□□ -0.25
CTSA-210ENST00000606000 RTP2Q5QGT7 225 aa13.48□□□□□ -0.25
CTSA-210ENST00000606000 KIAA0319Q5VV43 1072 aa13.48□□□□□ -0.25
CTSA-210ENST00000606000 PRSS55Q6UWB4 352 aaPredicted RBP13.48□□□□□ -0.25
CTSA-210ENST00000606000 MPZL3Q6UWV2 235 aa13.48□□□□□ -0.25
CTSA-210ENST00000606000 MYCT1Q8N699 235 aa13.48□□□□□ -0.25
CTSA-210ENST00000606000 TMEM87AQ8NBN3 555 aa13.48□□□□□ -0.25
CTSA-210ENST00000606000 RPGRIP1Q96KN7 1286 aa13.48□□□□□ -0.25
CTSA-210ENST00000606000 ZMAT2Q96NC0 199 aaKnown RBP13.48□□□□□ -0.25
CTSA-210ENST00000606000 PPP1R10Q96QC0 940 aaKnown RBP13.48□□□□□ -0.25
CTSA-210ENST00000606000 FIZ1Q96SL8 496 aa13.48□□□□□ -0.25
CTSA-210ENST00000606000 ZSCAN16Q9H4T2 348 aaPredicted RBP13.48□□□□□ -0.25
CTSA-210ENST00000606000 C11orf16Q9NQ32 467 aa13.48□□□□□ -0.25
CTSA-210ENST00000606000 TFIP11Q9UBB9 837 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms