RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 IL31Q6EBC2 164 aa17.15■□□□□ 0.34
NEDD8-MDP1-204ENST00000605847 PRR23CQ6ZRP0 262 aa17.15■□□□□ 0.34
NEDD8-MDP1-204ENST00000605847 NPAS3Q8IXF0 933 aa17.15■□□□□ 0.34
NEDD8-MDP1-204ENST00000605847 SLC7A14Q8TBB6 771 aa17.15■□□□□ 0.34
NEDD8-MDP1-204ENST00000605847 TBCKQ8TEA7 893 aa17.15■□□□□ 0.34
NEDD8-MDP1-204ENST00000605847 RABGGTAQ92696 567 aa17.15■□□□□ 0.34
NEDD8-MDP1-204ENST00000605847 CPB2Q96IY4 423 aa17.15■□□□□ 0.34
NEDD8-MDP1-204ENST00000605847 TTPALQ9BTX7 342 aa17.15■□□□□ 0.34
NEDD8-MDP1-204ENST00000605847 CSRNP2Q9H175 543 aa17.15■□□□□ 0.34
NEDD8-MDP1-204ENST00000605847 BMP2KQ9NSY1 1161 aaPredicted RBP17.15■□□□□ 0.34
NEDD8-MDP1-204ENST00000605847 RALYQ9UKM9 306 aaKnown RBP17.15■□□□□ 0.34
NEDD8-MDP1-204ENST00000605847 KCNH3Q9ULD8 1083 aa17.15■□□□□ 0.34
NEDD8-MDP1-204ENST00000605847 PPME1Q9Y570 386 aa17.15■□□□□ 0.34
NEDD8-MDP1-204ENST00000605847 WDR81Q562E7 1941 aa17.15■□□□□ 0.34
NEDD8-MDP1-204ENST00000605847 MTCL1Q9Y4B5 1905 aaKnown RBP17.14■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 MAN2B1O00754 1011 aa17.14■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 PRPF3O43395 683 aaKnown RBP17.14■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 FOXD2O60548 495 aaPredicted RBP17.14■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 TSPAN1O60635 241 aa17.14■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 ECI2O75521 394 aa17.14■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 RFC5P40937 340 aa17.14■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 SIM2Q14190 667 aaPredicted RBP17.14■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 HSP90AA2PQ14568 343 aaPredicted RBP17.14■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 CSRP2Q16527 193 aa17.14■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.14■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 ING5Q8WYH8 240 aa17.14■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 CLSTN3Q9BQT9 956 aa17.14■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 IER2Q9BTL4 223 aa17.14■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 C22orf23Q9BZE7 217 aa17.14■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 SLKQ9H2G2 1235 aaPredicted RBP17.14■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 MRPS23Q9Y3D9 190 aaKnown RBP17.14■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 INO80B-WBP1J3KQ70 363 aa17.13■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 AKAP5P24588 427 aa17.13■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 QARSP47897 775 aaKnown RBP17.13■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 CCR3P51677 355 aa17.13■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 FZD5Q13467 585 aa17.13■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 UVSSAQ2YD98 709 aa17.13■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 AXDND1Q5T1B0 1012 aaPredicted RBP17.13■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 FAM171A1Q5VUB5 890 aa17.13■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 PDXDC1Q6P996 788 aa17.13■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 B3GNT9Q6UX72 402 aa17.13■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 FERMT3Q86UX7 667 aa17.13■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 HASPINQ8TF76 798 aa17.13■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 PIK3R5Q8WYR1 880 aa17.13■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 DNASE1L2Q92874 299 aa17.13■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 MCRS1Q96EZ8 462 aa17.13■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 CHRDQ9H2X0 955 aa17.13■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 NXF3Q9H4D5 531 aaKnown RBP17.13■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 DHX33Q9H6R0 707 aaKnown RBP17.13■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 BRD9Q9H8M2 597 aa17.13■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 HCFC1R1Q9NWW0 138 aa17.13■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 GDE1Q9NZC3 331 aa17.13■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 DNMT3BQ9UBC3 853 aaKnown RBP17.13■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 PARP2Q9UGN5 583 aa17.13■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 EDIL3O43854 480 aa17.12■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 POU2F2P09086 479 aa17.12■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 NLRP5P59047 1200 aa17.12■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 EMC2Q15006 297 aa17.12■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 OTUD6AQ7L8S5 288 aa17.12■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 ZNF579Q8NAF0 562 aaKnown RBP17.12■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 LNX1Q8TBB1 728 aaPredicted RBP17.12■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 ESYT1Q9BSJ8 1104 aa17.12■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 VPS54Q9P1Q0 977 aa17.12■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 GDF9O60383 454 aa17.11■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 TDP2O95551 362 aa17.11■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 TDGF1P13385 188 aa17.11■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 ELAVL2Q12926 359 aaKnown RBP17.11■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 COL9A2Q14055 689 aaPredicted RBP17.11■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 TFDP1Q14186 410 aa17.11■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 MXD4Q14582 209 aaPredicted RBP17.11■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 MAMSTRQ6ZN01 415 aa17.11■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 GSTCDQ8NEC7 633 aa17.11■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 MTRQ99707 1265 aa17.11■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 PLA2G2FQ9BZM2 168 aa17.11■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 SH2B1Q9NRF2 756 aaPredicted RBP17.11■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 KLK14Q9P0G3 267 aa17.11■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 SPTBN2O15020 2390 aa17.1■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 TDRD15B5MCY1 1934 aaKnown RBP17.1■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 CYP3A7-CYP3A51PA0A087WV96 503 aa17.1■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 P4HBP07237 508 aaKnown RBP17.1■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 CYP3A7P24462 503 aa17.1■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 CXCL12P48061 93 aa17.1■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 PTENP60484 403 aa17.1■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 TUSC3Q13454 348 aa17.1■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 AASDHQ4L235 1098 aaPredicted RBP17.1■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 RTL10Q7L3V2 364 aa17.1■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 ETNPPLQ8TBG4 499 aa17.1■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 ELSPBP1Q96BH3 223 aa17.1■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 LMAN1LQ9HAT1 526 aa17.1■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 CACNG4Q9UBN1 327 aa17.1■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 MAP1BP46821 2468 aaKnown RBP17.09■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 CASTOR2A6NHX0 329 aa17.09■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 NPTXRO95502 500 aa17.09■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 RHOP08100 348 aa17.09■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 HMGB1P09429 215 aaKnown RBP17.09■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 ARF4P18085 180 aaPredicted RBP17.09■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 PMLP29590 882 aa17.09■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 YWHABP31946 246 aaKnown RBP17.09■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 CNR2P34972 360 aa17.09■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 OR1D2P34982 312 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms