RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 SEC14L1Q92503 715 aa12.68□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 MAGOHBQ96A72 148 aaKnown RBP12.68□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 ZBTB45Q96K62 511 aaPredicted RBP12.68□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 MFSD14AQ96MC6 490 aa12.68□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 ERP44Q9BS26 406 aa12.68□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 POLR3FQ9H1D9 316 aaPredicted RBP12.68□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 FEZ2Q9UHY8 353 aaPredicted RBP12.68□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 PTPN22Q9Y2R2 807 aa12.68□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 COQ4Q9Y3A0 265 aa12.68□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 COL11A1P12107 1806 aaPredicted RBP12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 WDR81Q562E7 1941 aa12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 GOLGA6L10A0A0M3HER8 536 aa12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 GOLGA6L10A6NI86 522 aa12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 GRIN3BO60391 1043 aa12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 PSAPP07602 524 aa12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 GZMAP12544 262 aa12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 PDE6CP51160 858 aa12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 CNTN2Q02246 1040 aa12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 UBAP2Q5T6F2 1119 aaKnown RBP12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 C11orf63Q6NUN7 778 aa12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 UBL4BQ8N7F7 174 aa12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 FBXO25Q8TCJ0 367 aa12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 DDX1Q92499 740 aaKnown RBP12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 FBXL18Q96ME1 805 aa12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 FMO2Q99518 471 aa12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 PDLIM7Q9NR12 457 aa12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 ATP4AP20648 1035 aa12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 HADHBP55084 474 aaKnown RBP12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 TGFB2P61812 414 aa12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 SNRPFP62306 86 aaKnown RBP12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 CDR2Q01850 454 aa12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 SEZ6Q53EL9 994 aa12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 ZBTB41Q5SVQ8 909 aa12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 DUPD1Q68J44 220 aa12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 KDM7AQ6ZMT4 941 aa12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 GPD1LQ8N335 351 aa12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 EIF1ADQ8N9N8 165 aaKnown RBP12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 TRPM4Q8TD43 1214 aa12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 SPIRE2Q8WWL2 714 aa12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 CPA5Q8WXQ8 436 aa12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.67□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 DGAT1O75907 488 aa12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 RPS12P25398 132 aaKnown RBP12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 LSP1P33241 339 aa12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 NLRP11P59045 1033 aaKnown RBP12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 DCAF15Q66K64 600 aa12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 ABHD15Q6UXT9 468 aa12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 SEPT14Q6ZU15 432 aa12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 NAP1L3Q99457 506 aaPredicted RBP12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 FAM107BQ9H098 131 aa12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 FAM114A2Q9NRY5 505 aa12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 DIS3Q9Y2L1 958 aaKnown RBP12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 RGPD3A6NKT7 1758 aaPredicted RBP12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 RGPD4Q7Z3J3 1758 aa12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 PTPRJQ12913 1337 aa12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 NDUFAB1O14561 156 aa12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 PMM2O15305 246 aa12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 CLSTN1O94985 981 aa12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 CFHP08603 1231 aa12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 TNNI1P19237 187 aa12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 TMOD1P28289 359 aa12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 SAMD3Q8N6K7 520 aa12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 UHMK1Q8TAS1 419 aaKnown RBP12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 SLC16A10Q8TF71 515 aa12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 CD101Q93033 1021 aa12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 SENP7Q9BQF6 1050 aa12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 TEX13BQ9BXU2 312 aa12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 HAPLN2Q9GZV7 340 aa12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 ATP6V0A4Q9HBG4 840 aa12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 ZDHHC18Q9NUE0 388 aa12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 CNOT8Q9UFF9 292 aaKnown RBP12.66□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 ZNF541Q9H0D2 1346 aa12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 MYH9P35579 1960 aaKnown RBP12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 MIF4GDA9UHW6 222 aaKnown RBP12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 HMGB1P1B2RPK0 211 aaPredicted RBP12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 KIAA0391O15091 583 aaKnown RBP12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 SHBGP04278 402 aa12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 LIG4P49917 911 aa12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 BRDTQ58F21 947 aaPredicted RBP12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 ODF2Q5BJF6 829 aa12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 CCDC137Q6PK04 289 aaKnown RBP12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 SLC17A8Q8NDX2 589 aa12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 TMC2Q8TDI7 906 aa12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 IFT74Q96LB3 600 aa12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 RAB17Q9H0T7 212 aa12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 AS3MTQ9HBK9 375 aa12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 ARHGAP28Q9P2N2 729 aa12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 ADAMTS5Q9UNA0 930 aa12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 NOVA2Q9UNW9 492 aaKnown RBP12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 SYNGAP1Q96PV0 1343 aa12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 MAFGO15525 162 aa12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 CYP1A2P05177 515 aa12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 PTGIRP43119 386 aa12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 POLGP54098 1239 aaPredicted RBP12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 CATSPERGQ6ZRH7 1159 aa12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 MCPH1Q8NEM0 835 aa12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 RDM1Q8NG50 284 aa12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 VTI1AQ96AJ9 217 aa12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 RPS6KC1Q96S38 1066 aa12.65□□□□□ -0.38
HMGN3-AS1-201ENST00000604516 ACAD9Q9H845 621 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms