RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 MTRQ99707 1265 aa18.29■□□□□ 0.52
SHKBP1-215ENST00000597649 PAAF1Q9BRP4 392 aa18.29■□□□□ 0.52
SHKBP1-215ENST00000597649 ZSWIM4Q9H7M6 989 aa18.29■□□□□ 0.52
SHKBP1-215ENST00000597649 KLK14Q9P0G3 267 aa18.29■□□□□ 0.52
SHKBP1-215ENST00000597649 NR1I2O75469 434 aa18.28■□□□□ 0.52
SHKBP1-215ENST00000597649 ZMYND10O75800 440 aa18.28■□□□□ 0.52
SHKBP1-215ENST00000597649 ARL2P36404 184 aa18.28■□□□□ 0.52
SHKBP1-215ENST00000597649 STARD6P59095 220 aa18.28■□□□□ 0.52
SHKBP1-215ENST00000597649 NTHL1P78549 312 aa18.28■□□□□ 0.52
SHKBP1-215ENST00000597649 POU5F1BQ06416 359 aa18.28■□□□□ 0.52
SHKBP1-215ENST00000597649 CAPSQ13938 189 aa18.28■□□□□ 0.52
SHKBP1-215ENST00000597649 MXD4Q14582 209 aaPredicted RBP18.28■□□□□ 0.52
SHKBP1-215ENST00000597649 PCBP1Q15365 356 aaKnown RBP eCLIP18.28■□□□□ 0.52
SHKBP1-215ENST00000597649 RTP2Q5QGT7 225 aa18.28■□□□□ 0.52
SHKBP1-215ENST00000597649 PRSS55Q6UWB4 352 aaPredicted RBP18.28■□□□□ 0.52
SHKBP1-215ENST00000597649 PARM1Q6UWI2 310 aa18.28■□□□□ 0.52
SHKBP1-215ENST00000597649 TPH2Q8IWU9 490 aa18.28■□□□□ 0.52
SHKBP1-215ENST00000597649 GPR65Q8IYL9 337 aa18.28■□□□□ 0.52
SHKBP1-215ENST00000597649 FAM177A1Q8N128 213 aaPredicted RBP18.28■□□□□ 0.52
SHKBP1-215ENST00000597649 FGF14Q92915 247 aa18.28■□□□□ 0.52
SHKBP1-215ENST00000597649 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.28■□□□□ 0.52
SHKBP1-215ENST00000597649 ADAM28Q9UKQ2 775 aa18.28■□□□□ 0.52
SHKBP1-215ENST00000597649 CCDC194A0A1B0GVG4 234 aa18.27■□□□□ 0.52
SHKBP1-215ENST00000597649 TBX3O15119 743 aa18.27■□□□□ 0.52
SHKBP1-215ENST00000597649 GCFC2P16383 781 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-215ENST00000597649 GLRA2P23416 452 aa18.27■□□□□ 0.52
SHKBP1-215ENST00000597649 FSHRP23945 695 aa18.27■□□□□ 0.52
SHKBP1-215ENST00000597649 PIK3AP1Q6ZUJ8 805 aa18.27■□□□□ 0.52
SHKBP1-215ENST00000597649 GRASPQ7Z6J2 395 aaPredicted RBP18.27■□□□□ 0.52
SHKBP1-215ENST00000597649 PJA1Q8NG27 643 aa18.27■□□□□ 0.52
SHKBP1-215ENST00000597649 HSD17B14Q9BPX1 270 aa18.27■□□□□ 0.52
SHKBP1-215ENST00000597649 CLSTN3Q9BQT9 956 aa18.27■□□□□ 0.52
SHKBP1-215ENST00000597649 MTF2Q9Y483 593 aaPredicted RBP18.27■□□□□ 0.52
SHKBP1-215ENST00000597649 MTCL1Q9Y4B5 1905 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-215ENST00000597649 A0A087WWV3 80 aa18.26■□□□□ 0.51
SHKBP1-215ENST00000597649 FAM205CA6NFA0 338 aa18.26■□□□□ 0.51
SHKBP1-215ENST00000597649 NPTXRO95502 500 aa18.26■□□□□ 0.51
SHKBP1-215ENST00000597649 NCBP1Q09161 790 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-215ENST00000597649 SNW1Q13573 536 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-215ENST00000597649 DGLUCYQ7Z3D6 616 aa18.26■□□□□ 0.51
SHKBP1-215ENST00000597649 SUMF1Q8NBK3 374 aa18.26■□□□□ 0.51
SHKBP1-215ENST00000597649 EIF2AK1Q9BQI3 630 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-215ENST00000597649 TRIM6Q9C030 488 aaPredicted RBP18.26■□□□□ 0.51
SHKBP1-215ENST00000597649 CXCL16Q9H2A7 254 aa18.26■□□□□ 0.51
SHKBP1-215ENST00000597649 A0A1B0GUA9 196 aa18.25■□□□□ 0.51
SHKBP1-215ENST00000597649 ADAM12O43184 909 aa18.25■□□□□ 0.51
SHKBP1-215ENST00000597649 TADA2AO75478 443 aa18.25■□□□□ 0.51
SHKBP1-215ENST00000597649 TFDP1Q14186 410 aa18.25■□□□□ 0.51
SHKBP1-215ENST00000597649 LNX1Q8TBB1 728 aaPredicted RBP18.25■□□□□ 0.51
SHKBP1-215ENST00000597649 HASPINQ8TF76 798 aa18.25■□□□□ 0.51
SHKBP1-215ENST00000597649 NFKBIZQ9BYH8 718 aa18.25■□□□□ 0.51
SHKBP1-215ENST00000597649 PARP2Q9UGN5 583 aa18.25■□□□□ 0.51
SHKBP1-215ENST00000597649 FBXW11Q9UKB1 542 aa18.25■□□□□ 0.51
SHKBP1-215ENST00000597649 CDH7Q9ULB5 785 aa18.25■□□□□ 0.51
SHKBP1-215ENST00000597649 COL4A3Q01955 1670 aa18.25■□□□□ 0.51
SHKBP1-215ENST00000597649 MARCH6O60337 910 aa18.24■□□□□ 0.51
SHKBP1-215ENST00000597649 LYPLA2O95372 231 aa18.24■□□□□ 0.51
SHKBP1-215ENST00000597649 IGFBP6P24592 240 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-215ENST00000597649 SCRN1Q12765 414 aa18.24■□□□□ 0.51
SHKBP1-215ENST00000597649 GRIK3Q13003 919 aa18.24■□□□□ 0.51
SHKBP1-215ENST00000597649 HSP90AA2PQ14568 343 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-215ENST00000597649 SLC27A1Q6PCB7 646 aa18.24■□□□□ 0.51
SHKBP1-215ENST00000597649 ITFG1Q8TB96 612 aa18.24■□□□□ 0.51
SHKBP1-215ENST00000597649 RUBCNQ92622 972 aa18.24■□□□□ 0.51
SHKBP1-215ENST00000597649 FGF13Q92913 245 aa18.24■□□□□ 0.51
SHKBP1-215ENST00000597649 DDX23Q9BUQ8 820 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-215ENST00000597649 ANKEF1Q9NU02 776 aa18.24■□□□□ 0.51
SHKBP1-215ENST00000597649 ZFP37Q9Y6Q3 630 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-215ENST00000597649 CACNA1BQ00975 2339 aa18.23■□□□□ 0.51
SHKBP1-215ENST00000597649 TTLL13PA6NNM8 815 aa18.23■□□□□ 0.51
SHKBP1-215ENST00000597649 DGAT1O75907 488 aa18.23■□□□□ 0.51
SHKBP1-215ENST00000597649 KIF4AO95239 1232 aa18.23■□□□□ 0.51
SHKBP1-215ENST00000597649 PUM1Q14671 1186 aaKnown RBP eCLIP18.23■□□□□ 0.51
SHKBP1-215ENST00000597649 SLC44A4Q53GD3 710 aa18.23■□□□□ 0.51
SHKBP1-215ENST00000597649 ZC3H14Q6PJT7 736 aaKnown RBP18.23■□□□□ 0.51
SHKBP1-215ENST00000597649 CPLX2Q6PUV4 134 aaKnown RBP18.23■□□□□ 0.51
SHKBP1-215ENST00000597649 SLFN12Q8IYM2 578 aa18.23■□□□□ 0.51
SHKBP1-215ENST00000597649 HACE1Q8IYU2 909 aa18.23■□□□□ 0.51
SHKBP1-215ENST00000597649 TTPALQ9BTX7 342 aa18.23■□□□□ 0.51
SHKBP1-215ENST00000597649 DLL3Q9NYJ7 618 aa18.23■□□□□ 0.51
SHKBP1-215ENST00000597649 FANCMQ8IYD8 2048 aa18.23■□□□□ 0.51
SHKBP1-215ENST00000597649 ACACBO00763 2458 aa18.23■□□□□ 0.51
SHKBP1-215ENST00000597649 TDRD15B5MCY1 1934 aaKnown RBP18.22■□□□□ 0.51
SHKBP1-215ENST00000597649 KANSL1LA0AUZ9 987 aa18.22■□□□□ 0.51
SHKBP1-215ENST00000597649 CASTOR2A6NHX0 329 aa18.22■□□□□ 0.51
SHKBP1-215ENST00000597649 PTGESO14684 152 aa18.22■□□□□ 0.51
SHKBP1-215ENST00000597649 CCL16O15467 120 aa18.22■□□□□ 0.51
SHKBP1-215ENST00000597649 C8AP07357 584 aa18.22■□□□□ 0.51
SHKBP1-215ENST00000597649 CD72P21854 359 aa18.22■□□□□ 0.51
SHKBP1-215ENST00000597649 RARRES1P49788 294 aa18.22■□□□□ 0.51
SHKBP1-215ENST00000597649 CREMQ03060 361 aa18.22■□□□□ 0.51
SHKBP1-215ENST00000597649 NR5A1Q13285 461 aa18.22■□□□□ 0.51
SHKBP1-215ENST00000597649 NAB2Q15742 525 aa18.22■□□□□ 0.51
SHKBP1-215ENST00000597649 FAM171A1Q5VUB5 890 aa18.22■□□□□ 0.51
SHKBP1-215ENST00000597649 POTEHQ6S545 545 aa18.22■□□□□ 0.51
SHKBP1-215ENST00000597649 CEP57Q86XR8 500 aa18.22■□□□□ 0.51
SHKBP1-215ENST00000597649 PIGOQ8TEQ8 1089 aa18.22■□□□□ 0.51
SHKBP1-215ENST00000597649 PIK3R5Q8WYR1 880 aa18.22■□□□□ 0.51
SHKBP1-215ENST00000597649 TNFRSF25Q93038 417 aa18.22■□□□□ 0.51
SHKBP1-215ENST00000597649 SHDQ96IW2 340 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms