RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 SMYD4Q8IYR2 804 aaPredicted RBP15.67■□□□□ 0.1
VRK3-213ENST00000597215 LRRC43Q8N309 656 aa15.67■□□□□ 0.1
VRK3-213ENST00000597215 RPS6KC1Q96S38 1066 aa15.67■□□□□ 0.1
VRK3-213ENST00000597215 GAD1Q99259 594 aa15.67■□□□□ 0.1
VRK3-213ENST00000597215 AGPAT3Q9NRZ7 376 aa15.67■□□□□ 0.1
VRK3-213ENST00000597215 TOPORSQ9NS56 1045 aaPredicted RBP15.67■□□□□ 0.1
VRK3-213ENST00000597215 TYW1Q9NV66 732 aaKnown RBP15.67■□□□□ 0.1
VRK3-213ENST00000597215 MAPK8IP1Q9UQF2 711 aa15.67■□□□□ 0.1
VRK3-213ENST00000597215 INPP5FQ9Y2H2 1132 aa15.67■□□□□ 0.1
VRK3-213ENST00000597215 YBX2Q9Y2T7 364 aaKnown RBP15.67■□□□□ 0.1
VRK3-213ENST00000597215 LCHNA4D1U4 455 aa15.66■□□□□ 0.1
VRK3-213ENST00000597215 ARL5CA6NH57 179 aa15.66■□□□□ 0.1
VRK3-213ENST00000597215 INPPL1O15357 1258 aa15.66■□□□□ 0.1
VRK3-213ENST00000597215 FAM189A1O60320 539 aa15.66■□□□□ 0.1
VRK3-213ENST00000597215 LDHAP00338 332 aaKnown RBP15.66■□□□□ 0.1
VRK3-213ENST00000597215 CA3P07451 260 aa15.66■□□□□ 0.1
VRK3-213ENST00000597215 CLTAP09496 248 aa15.66■□□□□ 0.1
VRK3-213ENST00000597215 MLH1P40692 756 aa15.66■□□□□ 0.1
VRK3-213ENST00000597215 PRCPP42785 496 aa15.66■□□□□ 0.1
VRK3-213ENST00000597215 HSP90AA2PQ14568 343 aaPredicted RBP15.66■□□□□ 0.1
VRK3-213ENST00000597215 CCDC183Q5T5S1 534 aa15.66■□□□□ 0.1
VRK3-213ENST00000597215 ISM2Q6H9L7 571 aa15.66■□□□□ 0.1
VRK3-213ENST00000597215 C12orf56Q8IXR9 622 aa15.66■□□□□ 0.1
VRK3-213ENST00000597215 FIBCD1Q8N539 461 aa15.66■□□□□ 0.1
VRK3-213ENST00000597215 TIFAQ96CG3 184 aa15.66■□□□□ 0.1
VRK3-213ENST00000597215 CBWD1Q9BRT8 395 aa15.66■□□□□ 0.1
VRK3-213ENST00000597215 NKX2-4Q9H2Z4 354 aa15.66■□□□□ 0.1
VRK3-213ENST00000597215 KCTD10Q9H3F6 313 aa15.66■□□□□ 0.1
VRK3-213ENST00000597215 KLK14Q9P0G3 267 aa15.66■□□□□ 0.1
VRK3-213ENST00000597215 KANSL3Q9P2N6 904 aa15.66■□□□□ 0.1
VRK3-213ENST00000597215 RALGAPA2Q2PPJ7 1873 aa15.65■□□□□ 0.1
VRK3-213ENST00000597215 TDRD15B5MCY1 1934 aaKnown RBP15.65■□□□□ 0.1
VRK3-213ENST00000597215 PDXKO00764 312 aa15.65■□□□□ 0.1
VRK3-213ENST00000597215 CALUO43852 315 aaPredicted RBP15.65■□□□□ 0.1
VRK3-213ENST00000597215 KLHL40Q2TBA0 621 aa15.65■□□□□ 0.1
VRK3-213ENST00000597215 SEZ6Q53EL9 994 aa15.65■□□□□ 0.1
VRK3-213ENST00000597215 TMEM192Q8IY95 271 aa15.65■□□□□ 0.1
VRK3-213ENST00000597215 SYAP1Q96A49 352 aaPredicted RBP15.65■□□□□ 0.1
VRK3-213ENST00000597215 ZFP42Q96MM3 310 aa15.65■□□□□ 0.1
VRK3-213ENST00000597215 PCIF1Q9H4Z3 704 aa15.65■□□□□ 0.1
VRK3-213ENST00000597215 RPF1Q9H9Y2 349 aaKnown RBP15.65■□□□□ 0.1
VRK3-213ENST00000597215 SLC28A3Q9HAS3 691 aa15.65■□□□□ 0.1
VRK3-213ENST00000597215 TRIP11Q15643 1979 aa15.64■□□□□ 0.09
VRK3-213ENST00000597215 LINC01553A4QN01 128 aa15.64■□□□□ 0.09
VRK3-213ENST00000597215 SOX1O00570 391 aaPredicted RBP15.64■□□□□ 0.09
VRK3-213ENST00000597215 PSMA7O14818 248 aa15.64■□□□□ 0.09
VRK3-213ENST00000597215 CLIC2O15247 247 aa15.64■□□□□ 0.09
VRK3-213ENST00000597215 EXTL3O43909 919 aa15.64■□□□□ 0.09
VRK3-213ENST00000597215 CXCL8P10145 99 aa15.64■□□□□ 0.09
VRK3-213ENST00000597215 TNFSF9P41273 254 aa15.64■□□□□ 0.09
VRK3-213ENST00000597215 ACOT2P49753 483 aa15.64■□□□□ 0.09
VRK3-213ENST00000597215 SCNN1GP51170 649 aa15.64■□□□□ 0.09
VRK3-213ENST00000597215 POU5F1Q01860 360 aaKnown RBP15.64■□□□□ 0.09
VRK3-213ENST00000597215 RNASELQ05823 741 aaKnown RBP15.64■□□□□ 0.09
VRK3-213ENST00000597215 GRIK3Q13003 919 aa15.64■□□□□ 0.09
VRK3-213ENST00000597215 ZBTB41Q5SVQ8 909 aa15.64■□□□□ 0.09
VRK3-213ENST00000597215 SPOUT1Q5T280 376 aaKnown RBP15.64■□□□□ 0.09
VRK3-213ENST00000597215 PPP2R2DQ66LE6 453 aa15.64■□□□□ 0.09
VRK3-213ENST00000597215 RBM43Q6ZSC3 357 aaKnown RBP15.64■□□□□ 0.09
VRK3-213ENST00000597215 ADSSL1Q8N142 457 aa15.64■□□□□ 0.09
VRK3-213ENST00000597215 GPD1LQ8N335 351 aa15.64■□□□□ 0.09
VRK3-213ENST00000597215 SAAL1Q96ER3 474 aa15.64■□□□□ 0.09
VRK3-213ENST00000597215 SNX27Q96L92 541 aa15.64■□□□□ 0.09
VRK3-213ENST00000597215 FAM213AQ9BRX8 229 aa15.64■□□□□ 0.09
VRK3-213ENST00000597215 PLEKHA5Q9HAU0 1116 aa15.64■□□□□ 0.09
VRK3-213ENST00000597215 KIAA1586Q9HCI6 787 aa15.64■□□□□ 0.09
VRK3-213ENST00000597215 TBC1D13Q9NVG8 400 aa15.64■□□□□ 0.09
VRK3-213ENST00000597215 HSPBP1Q9NZL4 362 aa15.64■□□□□ 0.09
VRK3-213ENST00000597215 CPSF3Q9UKF6 684 aaKnown RBP15.64■□□□□ 0.09
VRK3-213ENST00000597215 TRAF3IP3Q9Y228 551 aa15.64■□□□□ 0.09
VRK3-213ENST00000597215 RWDD3Q9Y3V2 267 aa15.64■□□□□ 0.09
VRK3-213ENST00000597215 MRPL42Q9Y6G3 142 aaKnown RBP15.64■□□□□ 0.09
VRK3-213ENST00000597215 NLRC5Q86WI3 1866 aa15.63■□□□□ 0.09
VRK3-213ENST00000597215 TMEM265A0A087WTH1 108 aa15.63■□□□□ 0.09
VRK3-213ENST00000597215 POMCP01189 267 aa15.63■□□□□ 0.09
VRK3-213ENST00000597215 BMP6P22004 513 aa15.63■□□□□ 0.09
VRK3-213ENST00000597215 CYP2J2P51589 502 aa15.63■□□□□ 0.09
VRK3-213ENST00000597215 TAP1Q03518 808 aa15.63■□□□□ 0.09
VRK3-213ENST00000597215 PPP2R3AQ06190 1150 aa15.63■□□□□ 0.09
VRK3-213ENST00000597215 ENOX2Q16206 610 aaKnown RBP15.63■□□□□ 0.09
VRK3-213ENST00000597215 NFIL3Q16649 462 aa15.63■□□□□ 0.09
VRK3-213ENST00000597215 SKOR2Q2VWA4 1001 aaPredicted RBP15.63■□□□□ 0.09
VRK3-213ENST00000597215 CAVIN1Q6NZI2 390 aaKnown RBP15.63■□□□□ 0.09
VRK3-213ENST00000597215 XXYLT1Q8NBI6 393 aa15.63■□□□□ 0.09
VRK3-213ENST00000597215 NOC3LQ8WTT2 800 aaKnown RBP15.63■□□□□ 0.09
VRK3-213ENST00000597215 TMEM174Q8WUU8 243 aa15.63■□□□□ 0.09
VRK3-213ENST00000597215 CLP1Q92989 425 aaKnown RBP15.63■□□□□ 0.09
VRK3-213ENST00000597215 DHTKD1Q96HY7 919 aaPredicted RBP15.63■□□□□ 0.09
VRK3-213ENST00000597215 SAMD11Q96NU1 681 aa15.63■□□□□ 0.09
VRK3-213ENST00000597215 FAM193BQ96PV7 902 aaPredicted RBP15.63■□□□□ 0.09
VRK3-213ENST00000597215 TGS1Q96RS0 853 aaKnown RBP15.63■□□□□ 0.09
VRK3-213ENST00000597215 TSG101Q99816 390 aa15.63■□□□□ 0.09
VRK3-213ENST00000597215 CWH43Q9H720 699 aa15.63■□□□□ 0.09
VRK3-213ENST00000597215 TMEM63CQ9P1W3 806 aa15.63■□□□□ 0.09
VRK3-213ENST00000597215 CNTN3Q9P232 1028 aa15.63■□□□□ 0.09
VRK3-213ENST00000597215 KIAA1671Q9BY89 1806 aa15.63■□□□□ 0.09
VRK3-213ENST00000597215 PDCD11Q14690 1871 aaKnown RBP15.63■□□□□ 0.09
VRK3-213ENST00000597215 TTC26A0AVF1 554 aa15.62■□□□□ 0.09
VRK3-213ENST00000597215 CARNS1A5YM72 827 aa15.62■□□□□ 0.09
VRK3-213ENST00000597215 GOLGA8IPA6NC78 632 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms