RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 RB1P06400 928 aa15.69■□□□□ 0.1
LIG1-208ENST00000595758 LAG3P18627 525 aa15.69■□□□□ 0.1
LIG1-208ENST00000595758 YARSP54577 528 aaKnown RBP15.69■□□□□ 0.1
LIG1-208ENST00000595758 PNOCQ13519 176 aa15.69■□□□□ 0.1
LIG1-208ENST00000595758 ELOA2Q8IYF1 753 aaPredicted RBP15.69■□□□□ 0.1
LIG1-208ENST00000595758 CEP120Q8N960 986 aa15.69■□□□□ 0.1
LIG1-208ENST00000595758 ZNF507Q8TCN5 953 aa15.69■□□□□ 0.1
LIG1-208ENST00000595758 ACAP3Q96P50 834 aa15.69■□□□□ 0.1
LIG1-208ENST00000595758 CDX2Q99626 313 aaPredicted RBP15.69■□□□□ 0.1
LIG1-208ENST00000595758 MSTO1Q9BUK6 570 aa15.69■□□□□ 0.1
LIG1-208ENST00000595758 PLVAPQ9BX97 442 aa15.69■□□□□ 0.1
LIG1-208ENST00000595758 HAPLN2Q9GZV7 340 aa15.69■□□□□ 0.1
LIG1-208ENST00000595758 IKZF4Q9H2S9 585 aa15.69■□□□□ 0.1
LIG1-208ENST00000595758 PCDHB12Q9Y5F1 795 aa15.69■□□□□ 0.1
LIG1-208ENST00000595758 STYXL1Q9Y6J8 313 aa15.69■□□□□ 0.1
LIG1-208ENST00000595758 ZMYM2Q9UBW7 1377 aa15.69■□□□□ 0.1
LIG1-208ENST00000595758 TISP43B9A030 160 aa15.68■□□□□ 0.1
LIG1-208ENST00000595758 C5orf67F2Z3F1 127 aa15.68■□□□□ 0.1
LIG1-208ENST00000595758 RFXAPO00287 272 aa15.68■□□□□ 0.1
LIG1-208ENST00000595758 OGTO15294 1046 aa15.68■□□□□ 0.1
LIG1-208ENST00000595758 SMC2O95347 1197 aa15.68■□□□□ 0.1
LIG1-208ENST00000595758 CLTAP09496 248 aa15.68■□□□□ 0.1
LIG1-208ENST00000595758 HOXD13P35453 343 aa15.68■□□□□ 0.1
LIG1-208ENST00000595758 SCNN1GP51170 649 aa15.68■□□□□ 0.1
LIG1-208ENST00000595758 STK4Q13043 487 aa15.68■□□□□ 0.1
LIG1-208ENST00000595758 KYAT1Q16773 422 aa15.68■□□□□ 0.1
LIG1-208ENST00000595758 SEZ6Q53EL9 994 aa15.68■□□□□ 0.1
LIG1-208ENST00000595758 ZNF280BQ86YH2 543 aa15.68■□□□□ 0.1
LIG1-208ENST00000595758 COLGALT1Q8NBJ5 622 aa15.68■□□□□ 0.1
LIG1-208ENST00000595758 GSTCDQ8NEC7 633 aa15.68■□□□□ 0.1
LIG1-208ENST00000595758 SCFD1Q8WVM8 642 aa15.68■□□□□ 0.1
LIG1-208ENST00000595758 GUCD1Q96NT3 240 aa15.68■□□□□ 0.1
LIG1-208ENST00000595758 FAM193BQ96PV7 902 aaPredicted RBP15.68■□□□□ 0.1
LIG1-208ENST00000595758 RPS6KC1Q96S38 1066 aa15.68■□□□□ 0.1
LIG1-208ENST00000595758 GBP3Q9H0R5 595 aa15.68■□□□□ 0.1
LIG1-208ENST00000595758 TOPORSQ9NS56 1045 aaPredicted RBP15.68■□□□□ 0.1
LIG1-208ENST00000595758 MIOSQ9NXC5 875 aa15.68■□□□□ 0.1
LIG1-208ENST00000595758 UBE4BO95155 1302 aa15.68■□□□□ 0.1
LIG1-208ENST00000595758 GOLGA6L22H0YM25 854 aa15.67■□□□□ 0.1
LIG1-208ENST00000595758 ZC3H11AO75152 810 aaKnown RBP eCLIP15.67■□□□□ 0.1
LIG1-208ENST00000595758 RHOBTB3O94955 611 aa15.67■□□□□ 0.1
LIG1-208ENST00000595758 ADSSP30520 456 aa15.67■□□□□ 0.1
LIG1-208ENST00000595758 ALDH7A1P49419 539 aaKnown RBP15.67■□□□□ 0.1
LIG1-208ENST00000595758 BCAR1P56945 870 aa15.67■□□□□ 0.1
LIG1-208ENST00000595758 GPM6BQ13491 265 aa15.67■□□□□ 0.1
LIG1-208ENST00000595758 KCNB1Q14721 858 aa15.67■□□□□ 0.1
LIG1-208ENST00000595758 BMT2Q1RMZ1 405 aa15.67■□□□□ 0.1
LIG1-208ENST00000595758 KCNT2Q6UVM3 1135 aa15.67■□□□□ 0.1
LIG1-208ENST00000595758 KIAA0895Q8NCT3 520 aa15.67■□□□□ 0.1
LIG1-208ENST00000595758 GDPD5Q8WTR4 605 aa15.67■□□□□ 0.1
LIG1-208ENST00000595758 POMGNT1Q8WZA1 660 aa15.67■□□□□ 0.1
LIG1-208ENST00000595758 ZNF558Q96NG5 402 aa15.67■□□□□ 0.1
LIG1-208ENST00000595758 C11orf84Q9BUA3 381 aaPredicted RBP15.67■□□□□ 0.1
LIG1-208ENST00000595758 NRDE2Q9H7Z3 1164 aa15.67■□□□□ 0.1
LIG1-208ENST00000595758 LMBRD1Q9NUN5 540 aa15.67■□□□□ 0.1
LIG1-208ENST00000595758 RMND1Q9NWS8 449 aa15.67■□□□□ 0.1
LIG1-208ENST00000595758 AGO2Q9UKV8 859 aaKnown RBP15.67■□□□□ 0.1
LIG1-208ENST00000595758 CARNS1A5YM72 827 aa15.66■□□□□ 0.1
LIG1-208ENST00000595758 H3BNC9 293 aa15.66■□□□□ 0.1
LIG1-208ENST00000595758 PTGESO14684 152 aa15.66■□□□□ 0.1
LIG1-208ENST00000595758 DDHD2O94830 711 aa15.66■□□□□ 0.1
LIG1-208ENST00000595758 GARTP22102 1010 aa15.66■□□□□ 0.1
LIG1-208ENST00000595758 GRIK3Q13003 919 aa15.66■□□□□ 0.1
LIG1-208ENST00000595758 ZBTB41Q5SVQ8 909 aa15.66■□□□□ 0.1
LIG1-208ENST00000595758 ALKAL1Q6UXT8 129 aa15.66■□□□□ 0.1
LIG1-208ENST00000595758 NELFCDQ8IXH7 590 aa15.66■□□□□ 0.1
LIG1-208ENST00000595758 KLHL23Q8NBE8 558 aa15.66■□□□□ 0.1
LIG1-208ENST00000595758 MYLIPQ8WY64 445 aa15.66■□□□□ 0.1
LIG1-208ENST00000595758 ERCC4Q92889 916 aaPredicted RBP15.66■□□□□ 0.1
LIG1-208ENST00000595758 P2RX5Q93086 422 aa15.66■□□□□ 0.1
LIG1-208ENST00000595758 SMARCE1Q969G3 411 aa15.66■□□□□ 0.1
LIG1-208ENST00000595758 GSDMAQ96QA5 445 aa15.66■□□□□ 0.1
LIG1-208ENST00000595758 GAS2L1Q99501 681 aaPredicted RBP15.66■□□□□ 0.1
LIG1-208ENST00000595758 CXCL16Q9H2A7 254 aa15.66■□□□□ 0.1
LIG1-208ENST00000595758 SPG21Q9NZD8 308 aa15.66■□□□□ 0.1
LIG1-208ENST00000595758 PLAGL2Q9UPG8 496 aa15.66■□□□□ 0.1
LIG1-208ENST00000595758 PCDHA5Q9Y5H7 936 aa15.66■□□□□ 0.1
LIG1-208ENST00000595758 FAM189A1O60320 539 aa15.65■□□□□ 0.1
LIG1-208ENST00000595758 B4GALT3O60512 393 aa15.65■□□□□ 0.1
LIG1-208ENST00000595758 LPXNO60711 386 aa15.65■□□□□ 0.1
LIG1-208ENST00000595758 ALDH2P05091 517 aa15.65■□□□□ 0.1
LIG1-208ENST00000595758 THP07101 528 aa15.65■□□□□ 0.1
LIG1-208ENST00000595758 GALTP07902 379 aa15.65■□□□□ 0.1
LIG1-208ENST00000595758 PPM1AP35813 382 aa15.65■□□□□ 0.1
LIG1-208ENST00000595758 PBX3P40426 434 aa15.65■□□□□ 0.1
LIG1-208ENST00000595758 TNFSF9P41273 254 aa15.65■□□□□ 0.1
LIG1-208ENST00000595758 DSC1Q08554 894 aa15.65■□□□□ 0.1
LIG1-208ENST00000595758 ADGRE1Q14246 886 aa15.65■□□□□ 0.1
LIG1-208ENST00000595758 KNOP1Q1ED39 458 aaKnown RBP15.65■□□□□ 0.1
LIG1-208ENST00000595758 SLC10A6Q3KNW5 377 aa15.65■□□□□ 0.1
LIG1-208ENST00000595758 XKR4Q5GH76 650 aa15.65■□□□□ 0.1
LIG1-208ENST00000595758 COLGALT2Q8IYK4 626 aa15.65■□□□□ 0.1
LIG1-208ENST00000595758 SNX27Q96L92 541 aa15.65■□□□□ 0.1
LIG1-208ENST00000595758 CBWD1Q9BRT8 395 aa15.65■□□□□ 0.1
LIG1-208ENST00000595758 TMEM175Q9BSA9 504 aa15.65■□□□□ 0.1
LIG1-208ENST00000595758 RPF1Q9H9Y2 349 aaKnown RBP15.65■□□□□ 0.1
LIG1-208ENST00000595758 PLEKHA5Q9HAU0 1116 aa15.65■□□□□ 0.1
LIG1-208ENST00000595758 ALG13Q9NP73 1137 aaKnown RBP15.65■□□□□ 0.1
LIG1-208ENST00000595758 DNAJB4Q9UDY4 337 aa15.65■□□□□ 0.1
LIG1-208ENST00000595758 CPSF3Q9UKF6 684 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms