RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 XRCC4Q13426 336 aa16.45■□□□□ 0.22
ZNF541-205ENST00000595558 AUHQ13825 339 aaKnown RBP16.45■□□□□ 0.22
ZNF541-205ENST00000595558 LONRF1Q17RB8 773 aa16.45■□□□□ 0.22
ZNF541-205ENST00000595558 FAM133BQ5BKY9 247 aaKnown RBP16.45■□□□□ 0.22
ZNF541-205ENST00000595558 MIER3Q7Z3K6 550 aa16.45■□□□□ 0.22
ZNF541-205ENST00000595558 PIGWQ7Z7B1 504 aa16.45■□□□□ 0.22
ZNF541-205ENST00000595558 RHOT2Q8IXI1 618 aa16.45■□□□□ 0.22
ZNF541-205ENST00000595558 CCDC105Q8IYK2 499 aa16.45■□□□□ 0.22
ZNF541-205ENST00000595558 CXorf56Q9H5V9 222 aa16.45■□□□□ 0.22
ZNF541-205ENST00000595558 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.45■□□□□ 0.22
ZNF541-205ENST00000595558 CD2APQ9Y5K6 639 aa16.45■□□□□ 0.22
ZNF541-205ENST00000595558 RBBP6Q7Z6E9 1792 aaKnown RBP16.45■□□□□ 0.22
ZNF541-205ENST00000595558 SYNGAP1Q96PV0 1343 aa16.45■□□□□ 0.22
ZNF541-205ENST00000595558 TESPA1A2RU30 521 aaPredicted RBP16.45■□□□□ 0.22
ZNF541-205ENST00000595558 TP73O15350 636 aa16.45■□□□□ 0.22
ZNF541-205ENST00000595558 CYP26A1O43174 497 aa16.45■□□□□ 0.22
ZNF541-205ENST00000595558 DRG2P55039 364 aaKnown RBP16.45■□□□□ 0.22
ZNF541-205ENST00000595558 SIX1Q15475 284 aaPredicted RBP16.45■□□□□ 0.22
ZNF541-205ENST00000595558 DHX37Q8IY37 1157 aaKnown RBP16.45■□□□□ 0.22
ZNF541-205ENST00000595558 UBL4BQ8N7F7 174 aa16.45■□□□□ 0.22
ZNF541-205ENST00000595558 STRA6Q9BX79 667 aa16.45■□□□□ 0.22
ZNF541-205ENST00000595558 TEKT3Q9BXF9 490 aa16.45■□□□□ 0.22
ZNF541-205ENST00000595558 KDM4CQ9H3R0 1056 aa16.45■□□□□ 0.22
ZNF541-205ENST00000595558 ABCF3Q9NUQ8 709 aa16.45■□□□□ 0.22
ZNF541-205ENST00000595558 PCYOX1Q9UHG3 505 aa16.45■□□□□ 0.22
ZNF541-205ENST00000595558 RASAL2Q9UJF2 1139 aa16.45■□□□□ 0.22
ZNF541-205ENST00000595558 SLC16A4O15374 487 aa16.44■□□□□ 0.22
ZNF541-205ENST00000595558 CCDC172P0C7W6 258 aa16.44■□□□□ 0.22
ZNF541-205ENST00000595558 RDXP35241 583 aaKnown RBP16.44■□□□□ 0.22
ZNF541-205ENST00000595558 TKFCQ3LXA3 575 aa16.44■□□□□ 0.22
ZNF541-205ENST00000595558 SPDYCQ5MJ68 293 aa16.44■□□□□ 0.22
ZNF541-205ENST00000595558 C11orf63Q6NUN7 778 aa16.44■□□□□ 0.22
ZNF541-205ENST00000595558 HIBCHQ6NVY1 386 aaPredicted RBP16.44■□□□□ 0.22
ZNF541-205ENST00000595558 ARMC9Q7Z3E5 817 aa16.44■□□□□ 0.22
ZNF541-205ENST00000595558 NACC1Q96RE7 527 aa16.44■□□□□ 0.22
ZNF541-205ENST00000595558 CTNNAL1Q9UBT7 734 aa16.44■□□□□ 0.22
ZNF541-205ENST00000595558 AGAP1Q9UPQ3 857 aa16.44■□□□□ 0.22
ZNF541-205ENST00000595558 ASNSP08243 561 aa16.44■□□□□ 0.22
ZNF541-205ENST00000595558 BCRP11274 1271 aa16.44■□□□□ 0.22
ZNF541-205ENST00000595558 COILP38432 576 aaPredicted RBP16.44■□□□□ 0.22
ZNF541-205ENST00000595558 VAMP7P51809 220 aa16.44■□□□□ 0.22
ZNF541-205ENST00000595558 ELF3P78545 371 aaPredicted RBP16.44■□□□□ 0.22
ZNF541-205ENST00000595558 SNX1Q13596 522 aa16.44■□□□□ 0.22
ZNF541-205ENST00000595558 PPP1R7Q15435 360 aa16.44■□□□□ 0.22
ZNF541-205ENST00000595558 PREPLQ4J6C6 727 aaPredicted RBP16.44■□□□□ 0.22
ZNF541-205ENST00000595558 SYTL5Q8TDW5 730 aaPredicted RBP16.44■□□□□ 0.22
ZNF541-205ENST00000595558 EPS8L1Q8TE68 723 aa16.44■□□□□ 0.22
ZNF541-205ENST00000595558 C1orf54Q8WWF1 131 aa16.44■□□□□ 0.22
ZNF541-205ENST00000595558 CD101Q93033 1021 aa16.44■□□□□ 0.22
ZNF541-205ENST00000595558 ATG4CQ96DT6 458 aa16.44■□□□□ 0.22
ZNF541-205ENST00000595558 KREMEN1Q96MU8 473 aa16.44■□□□□ 0.22
ZNF541-205ENST00000595558 FEM1BQ9UK73 627 aa16.44■□□□□ 0.22
ZNF541-205ENST00000595558 ACSL3O95573 720 aa16.43■□□□□ 0.22
ZNF541-205ENST00000595558 CCNE2O96020 404 aa16.43■□□□□ 0.22
ZNF541-205ENST00000595558 ICAM1P05362 532 aa16.43■□□□□ 0.22
ZNF541-205ENST00000595558 DLATP10515 647 aaKnown RBP16.43■□□□□ 0.22
ZNF541-205ENST00000595558 PPP2R5EQ16537 467 aa16.43■□□□□ 0.22
ZNF541-205ENST00000595558 PHLDB2Q86SQ0 1253 aa16.43■□□□□ 0.22
ZNF541-205ENST00000595558 EXOC3L1Q86VI1 746 aa16.43■□□□□ 0.22
ZNF541-205ENST00000595558 PWWP2AQ96N64 755 aa16.43■□□□□ 0.22
ZNF541-205ENST00000595558 NOCTQ9UK39 431 aaKnown RBP16.43■□□□□ 0.22
ZNF541-205ENST00000595558 MYH11P35749 1972 aa16.43■□□□□ 0.22
ZNF541-205ENST00000595558 RASGRF2O14827 1237 aa16.43■□□□□ 0.22
ZNF541-205ENST00000595558 CLDN3O15551 220 aa16.43■□□□□ 0.22
ZNF541-205ENST00000595558 MTMR1Q13613 665 aa16.43■□□□□ 0.22
ZNF541-205ENST00000595558 TRIP13Q15645 432 aaPredicted RBP16.43■□□□□ 0.22
ZNF541-205ENST00000595558 CNGA2Q16280 664 aa16.43■□□□□ 0.22
ZNF541-205ENST00000595558 EPC2Q52LR7 807 aa16.43■□□□□ 0.22
ZNF541-205ENST00000595558 B3GNT9Q6UX72 402 aa16.43■□□□□ 0.22
ZNF541-205ENST00000595558 SLC13A5Q86YT5 568 aaPredicted RBP16.43■□□□□ 0.22
ZNF541-205ENST00000595558 TBC1D31Q96DN5 1066 aa16.43■□□□□ 0.22
ZNF541-205ENST00000595558 NUP85Q9BW27 656 aa16.43■□□□□ 0.22
ZNF541-205ENST00000595558 AAASQ9NRG9 546 aa16.43■□□□□ 0.22
ZNF541-205ENST00000595558 SEL1LQ9UBV2 794 aa16.43■□□□□ 0.22
ZNF541-205ENST00000595558 PFASO15067 1338 aa16.42■□□□□ 0.22
ZNF541-205ENST00000595558 MIF4GDA9UHW6 222 aaKnown RBP16.42■□□□□ 0.22
ZNF541-205ENST00000595558 SPOPO43791 374 aa16.42■□□□□ 0.22
ZNF541-205ENST00000595558 CHKAP35790 457 aa16.42■□□□□ 0.22
ZNF541-205ENST00000595558 HADHBP55084 474 aaKnown RBP16.42■□□□□ 0.22
ZNF541-205ENST00000595558 PEX3P56589 373 aa16.42■□□□□ 0.22
ZNF541-205ENST00000595558 C6orf118Q5T5N4 469 aa16.42■□□□□ 0.22
ZNF541-205ENST00000595558 SEL1L2Q5TEA6 688 aa16.42■□□□□ 0.22
ZNF541-205ENST00000595558 CIAPIN1Q6FI81 312 aa16.42■□□□□ 0.22
ZNF541-205ENST00000595558 ATG4AQ8WYN0 398 aa16.42■□□□□ 0.22
ZNF541-205ENST00000595558 SEMA4DQ92854 862 aa16.42■□□□□ 0.22
ZNF541-205ENST00000595558 ART4Q93070 314 aa16.42■□□□□ 0.22
ZNF541-205ENST00000595558 SAAL1Q96ER3 474 aa16.42■□□□□ 0.22
ZNF541-205ENST00000595558 HERPUD2Q9BSE4 406 aa16.42■□□□□ 0.22
ZNF541-205ENST00000595558 TRIM7Q9C029 511 aa16.42■□□□□ 0.22
ZNF541-205ENST00000595558 RPAP3Q9H6T3 665 aaPredicted RBP16.42■□□□□ 0.22
ZNF541-205ENST00000595558 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.42■□□□□ 0.22
ZNF541-205ENST00000595558 MCM8Q9UJA3 840 aa16.42■□□□□ 0.22
ZNF541-205ENST00000595558 NFKBIEO00221 500 aa16.42■□□□□ 0.22
ZNF541-205ENST00000595558 RTN2O75298 545 aa16.42■□□□□ 0.22
ZNF541-205ENST00000595558 DNAJC8O75937 253 aaPredicted RBP16.42■□□□□ 0.22
ZNF541-205ENST00000595558 AGTP01019 485 aa16.42■□□□□ 0.22
ZNF541-205ENST00000595558 MAP2K1Q02750 393 aaPredicted RBP16.42■□□□□ 0.22
ZNF541-205ENST00000595558 WLSQ5T9L3 541 aa16.42■□□□□ 0.22
ZNF541-205ENST00000595558 DAB2IPQ5VWQ8 1189 aa16.42■□□□□ 0.22
ZNF541-205ENST00000595558 TBC1D1Q86TI0 1168 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms