RNA–Protein interactions for RNA: ENST00000591247.5

LSM12-204, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,484 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-204ENST00000591247 EPB41L5Q9HCM4 733 aa18.33■□□□□ 0.53
LSM12-204ENST00000591247 GOLGA6AQ9NYA3 693 aa18.33■□□□□ 0.53
LSM12-204ENST00000591247 FBXO40Q9UH90 709 aa18.33■□□□□ 0.53
LSM12-204ENST00000591247 AMFRQ9UKV5 643 aa18.33■□□□□ 0.53
LSM12-204ENST00000591247 NOC2LQ9Y3T9 749 aaKnown RBP18.33■□□□□ 0.53
LSM12-204ENST00000591247 A0A0G2JLL6 359 aaPredicted RBP18.33■□□□□ 0.52
LSM12-204ENST00000591247 EBAG9O00559 213 aa18.33■□□□□ 0.52
LSM12-204ENST00000591247 CNMDO75829 334 aa18.33■□□□□ 0.52
LSM12-204ENST00000591247 FARP2O94887 1054 aaPredicted RBP18.33■□□□□ 0.52
LSM12-204ENST00000591247 GLRA2P23416 452 aa18.33■□□□□ 0.52
LSM12-204ENST00000591247 CCT5P48643 541 aa18.33■□□□□ 0.52
LSM12-204ENST00000591247 MFAP3P55082 362 aa18.33■□□□□ 0.52
LSM12-204ENST00000591247 WNT7BP56706 349 aa18.33■□□□□ 0.52
LSM12-204ENST00000591247 PRRT2Q7Z6L0 340 aaPredicted RBP18.33■□□□□ 0.52
LSM12-204ENST00000591247 RASGEF1CQ8N431 466 aa18.33■□□□□ 0.52
LSM12-204ENST00000591247 ZNF516Q92618 1163 aa18.33■□□□□ 0.52
LSM12-204ENST00000591247 TATDN2Q93075 761 aa18.33■□□□□ 0.52
LSM12-204ENST00000591247 MYCBPQ99417 103 aaPredicted RBP18.33■□□□□ 0.52
LSM12-204ENST00000591247 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.33■□□□□ 0.529e-7■□□□□ 10.7
LSM12-204ENST00000591247 HAPLN2Q9GZV7 340 aa18.33■□□□□ 0.52
LSM12-204ENST00000591247 PORCNQ9H237 461 aa18.33■□□□□ 0.52
LSM12-204ENST00000591247 DDX3YO15523 660 aaKnown RBP18.32■□□□□ 0.52
LSM12-204ENST00000591247 DHX38Q92620 1227 aaKnown RBP18.32■□□□□ 0.52
LSM12-204ENST00000591247 PI4K2AQ9BTU6 479 aa18.32■□□□□ 0.52
LSM12-204ENST00000591247 CHORDC1Q9UHD1 332 aaPredicted RBP18.32■□□□□ 0.52
LSM12-204ENST00000591247 GOLGA6BA6NDN3 693 aa18.32■□□□□ 0.52
LSM12-204ENST00000591247 PGRMC1O00264 195 aaKnown RBP18.32■□□□□ 0.52
LSM12-204ENST00000591247 GTF2H1P32780 548 aa18.32■□□□□ 0.52
LSM12-204ENST00000591247 ARL2P36404 184 aa18.32■□□□□ 0.52
LSM12-204ENST00000591247 LIG4P49917 911 aa18.32■□□□□ 0.52
LSM12-204ENST00000591247 EPHB4P54760 987 aa18.32■□□□□ 0.52
LSM12-204ENST00000591247 PPFIA1Q13136 1202 aa18.32■□□□□ 0.52
LSM12-204ENST00000591247 DCAF12L1Q5VU92 463 aa18.32■□□□□ 0.52
LSM12-204ENST00000591247 EEPD1Q7L9B9 569 aa18.32■□□□□ 0.52
LSM12-204ENST00000591247 IFT20Q8IY31 132 aa18.32■□□□□ 0.52
LSM12-204ENST00000591247 CASKIN2Q8WXE0 1202 aa18.32■□□□□ 0.52
LSM12-204ENST00000591247 NIFKQ9BYG3 293 aaKnown RBP18.32■□□□□ 0.52
LSM12-204ENST00000591247 RNF181Q9P0P0 153 aa18.32■□□□□ 0.52
LSM12-204ENST00000591247 FAM169AQ9Y6X4 670 aa18.32■□□□□ 0.52
LSM12-204ENST00000591247 MMEP08473 750 aa18.31■□□□□ 0.52
LSM12-204ENST00000591247 TNNC1P63316 161 aa18.31■□□□□ 0.52
LSM12-204ENST00000591247 FMO1Q01740 532 aa18.31■□□□□ 0.52
LSM12-204ENST00000591247 LMBRD2Q68DH5 695 aaPredicted RBP18.31■□□□□ 0.52
LSM12-204ENST00000591247 NT5C1BQ96P26 610 aa18.31■□□□□ 0.52
LSM12-204ENST00000591247 ASCC2Q9H1I8 757 aaPredicted RBP18.31■□□□□ 0.52
LSM12-204ENST00000591247 NFU1Q9UMS0 254 aa18.31■□□□□ 0.52
LSM12-204ENST00000591247 ZNF233A6NK53 670 aa18.31■□□□□ 0.52
LSM12-204ENST00000591247 EXTL3O43909 919 aa18.31■□□□□ 0.52
LSM12-204ENST00000591247 EDN1P05305 212 aa18.31■□□□□ 0.52
LSM12-204ENST00000591247 ITGA4P13612 1032 aa18.31■□□□□ 0.52
LSM12-204ENST00000591247 NLRP11P59045 1033 aaKnown RBP18.31■□□□□ 0.52
LSM12-204ENST00000591247 KCTD19Q17RG1 926 aaPredicted RBP18.31■□□□□ 0.52
LSM12-204ENST00000591247 EMBQ6PCB8 327 aa18.31■□□□□ 0.52
LSM12-204ENST00000591247 C15orf39Q6ZRI6 1047 aa18.31■□□□□ 0.52
LSM12-204ENST00000591247 TSEN2Q8NCE0 465 aaKnown RBP18.31■□□□□ 0.52
LSM12-204ENST00000591247 PROCA1Q8NCQ7 364 aaPredicted RBP18.31■□□□□ 0.52
LSM12-204ENST00000591247 IFT81Q8WYA0 676 aa18.31■□□□□ 0.52
LSM12-204ENST00000591247 ZBTB45Q96K62 511 aaPredicted RBP18.31■□□□□ 0.52
LSM12-204ENST00000591247 H0YCG3 227 aa18.3■□□□□ 0.52
LSM12-204ENST00000591247 RTN2O75298 545 aa18.3■□□□□ 0.52
LSM12-204ENST00000591247 FAM153BP0C7A2 387 aa18.3■□□□□ 0.52
LSM12-204ENST00000591247 CYP11B1P15538 503 aa18.3■□□□□ 0.52
LSM12-204ENST00000591247 IREB2P48200 963 aaKnown RBP18.3■□□□□ 0.52
LSM12-204ENST00000591247 FAM153CQ494X1 144 aa18.3■□□□□ 0.52
LSM12-204ENST00000591247 PSPC1Q8WXF1 523 aaKnown RBP18.3■□□□□ 0.52
LSM12-204ENST00000591247 CAVIN3Q969G5 261 aa18.3■□□□□ 0.52
LSM12-204ENST00000591247 FHDC1Q9C0D6 1143 aaPredicted RBP18.3■□□□□ 0.52
LSM12-204ENST00000591247 TXNRD2Q9NNW7 524 aa18.3■□□□□ 0.52
LSM12-204ENST00000591247 FAM153AQ9UHL3 310 aa18.3■□□□□ 0.52
LSM12-204ENST00000591247 STYXL1Q9Y6J8 313 aa18.3■□□□□ 0.52
LSM12-204ENST00000591247 LRRIQ4A6NIV6 560 aa18.3■□□□□ 0.52
LSM12-204ENST00000591247 NAMPTP43490 491 aa18.3■□□□□ 0.52
LSM12-204ENST00000591247 ACOT2P49753 483 aa18.3■□□□□ 0.52
LSM12-204ENST00000591247 LIG3P49916 1009 aa18.3■□□□□ 0.52
LSM12-204ENST00000591247 GPC5P78333 572 aa18.3■□□□□ 0.52
LSM12-204ENST00000591247 TARBP2Q15633 366 aaKnown RBP18.3■□□□□ 0.52
LSM12-204ENST00000591247 LY6KQ17RY6 165 aa18.3■□□□□ 0.52
LSM12-204ENST00000591247 CRELD2Q6UXH1 353 aaPredicted RBP18.3■□□□□ 0.52
LSM12-204ENST00000591247 RHOT2Q8IXI1 618 aa18.3■□□□□ 0.52
LSM12-204ENST00000591247 SLC7A3Q8WY07 619 aa18.3■□□□□ 0.52
LSM12-204ENST00000591247 KAT2BQ92831 832 aa18.3■□□□□ 0.52
LSM12-204ENST00000591247 CALR3Q96L12 384 aaKnown RBP18.3■□□□□ 0.52
LSM12-204ENST00000591247 CAPS2Q9BXY5 557 aa18.3■□□□□ 0.52
LSM12-204ENST00000591247 CTTNBP2NLQ9P2B4 639 aa18.3■□□□□ 0.52
LSM12-204ENST00000591247 ZNFX1Q9P2E3 1918 aaKnown RBP18.3■□□□□ 0.52
LSM12-204ENST00000591247 KRIT1O00522 736 aa18.29■□□□□ 0.52
LSM12-204ENST00000591247 CALCAP01258 141 aa18.29■□□□□ 0.52
LSM12-204ENST00000591247 PGK2P07205 417 aa18.29■□□□□ 0.52
LSM12-204ENST00000591247 HADHBP55084 474 aaKnown RBP18.29■□□□□ 0.52
LSM12-204ENST00000591247 CLDN10P78369 228 aa18.29■□□□□ 0.52
LSM12-204ENST00000591247 STRN3Q13033 797 aa18.29■□□□□ 0.52
LSM12-204ENST00000591247 USP37Q86T82 979 aa18.29■□□□□ 0.52
LSM12-204ENST00000591247 DDX1Q92499 740 aaKnown RBP18.29■□□□□ 0.52
LSM12-204ENST00000591247 DDX47Q9H0S4 455 aaKnown RBP18.29■□□□□ 0.52
LSM12-204ENST00000591247 ALG6Q9Y672 507 aa18.29■□□□□ 0.52
LSM12-204ENST00000591247 PTPRJQ12913 1337 aa18.29■□□□□ 0.52
LSM12-204ENST00000591247 LRRC37A2A6NM11 1700 aa18.29■□□□□ 0.52
LSM12-204ENST00000591247 LOC102724159A0A0B4J2E5 919 aa18.29■□□□□ 0.52
LSM12-204ENST00000591247 SOCS7O14512 581 aa18.29■□□□□ 0.52
LSM12-204ENST00000591247 ATMINO43313 823 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms