RNA–Protein interactions for RNA: ENST00000589933.1

TMC6-213, Transcript of transmembrane channel like 6, humanhuman

TSL 3

Gene TMC6, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-213ENST00000589933 LIG1P18858 919 aa23.27■■□□□ 1.32
TMC6-213ENST00000589933 GBP2P32456 591 aaPredicted RBP23.27■■□□□ 1.32
TMC6-213ENST00000589933 EFNA5P52803 228 aa23.27■■□□□ 1.32
TMC6-213ENST00000589933 ST3GAL1Q11201 340 aa23.27■■□□□ 1.32
TMC6-213ENST00000589933 ELAVL2Q12926 359 aaKnown RBP23.27■■□□□ 1.32
TMC6-213ENST00000589933 PALB2Q86YC2 1186 aa23.27■■□□□ 1.32
TMC6-213ENST00000589933 GSTCDQ8NEC7 633 aa23.27■■□□□ 1.32
TMC6-213ENST00000589933 SMG7Q92540 1137 aaKnown RBP23.27■■□□□ 1.32
TMC6-213ENST00000589933 KIFAP3Q92845 792 aa23.27■■□□□ 1.32
TMC6-213ENST00000589933 LRWD1Q9UFC0 647 aa23.27■■□□□ 1.32
TMC6-213ENST00000589933 KIF3AQ9Y496 699 aa23.27■■□□□ 1.32
TMC6-213ENST00000589933 TRIP11Q15643 1979 aa23.27■■□□□ 1.32
TMC6-213ENST00000589933 ACKR2O00590 384 aa23.26■■□□□ 1.31
TMC6-213ENST00000589933 EFEMP2O95967 443 aa23.26■■□□□ 1.31
TMC6-213ENST00000589933 FXR2P51116 673 aaKnown RBP eCLIP23.26■■□□□ 1.31
TMC6-213ENST00000589933 TCF15Q12870 199 aa23.26■■□□□ 1.31
TMC6-213ENST00000589933 DCAF4L1Q3SXM0 396 aa23.26■■□□□ 1.31
TMC6-213ENST00000589933 PDXDC1Q6P996 788 aa23.26■■□□□ 1.31
TMC6-213ENST00000589933 ATOH1Q92858 354 aaPredicted RBP23.26■■□□□ 1.31
TMC6-213ENST00000589933 GPR62Q9BZJ7 368 aa23.26■■□□□ 1.31
TMC6-213ENST00000589933 WDR6Q9NNW5 1121 aaKnown RBP23.26■■□□□ 1.31
TMC6-213ENST00000589933 ZDHHC7Q9NXF8 308 aa23.26■■□□□ 1.31
TMC6-213ENST00000589933 FBXL21Q9UKT6 434 aa23.26■■□□□ 1.31
TMC6-213ENST00000589933 SEC24BO95487 1268 aa23.25■■□□□ 1.31
TMC6-213ENST00000589933 PDGFBP01127 241 aaPredicted RBP23.25■■□□□ 1.31
TMC6-213ENST00000589933 PDIA5Q14554 519 aa23.25■■□□□ 1.31
TMC6-213ENST00000589933 ASTLQ6HA08 431 aaPredicted RBP23.25■■□□□ 1.31
TMC6-213ENST00000589933 PDZD7Q9H5P4 517 aa23.25■■□□□ 1.31
TMC6-213ENST00000589933 SNTG2Q9NY99 539 aa23.25■■□□□ 1.31
TMC6-213ENST00000589933 CLUHO75153 1309 aa23.25■■□□□ 1.31
TMC6-213ENST00000589933 TRIOO75962 3097 aa23.24■■□□□ 1.31
TMC6-213ENST00000589933 GALR2O43603 387 aaPredicted RBP23.24■■□□□ 1.31
TMC6-213ENST00000589933 GLYCTKQ8IVS8 523 aa23.24■■□□□ 1.31
TMC6-213ENST00000589933 NXPE3Q969Y0 559 aa23.24■■□□□ 1.31
TMC6-213ENST00000589933 TTPALQ9BTX7 342 aa23.24■■□□□ 1.31
TMC6-213ENST00000589933 BHMT2Q9H2M3 363 aa23.24■■□□□ 1.31
TMC6-213ENST00000589933 KCNK12Q9HB15 430 aa23.24■■□□□ 1.31
TMC6-213ENST00000589933 MYH11P35749 1972 aa23.23■■□□□ 1.31
TMC6-213ENST00000589933 CASTOR2A6NHX0 329 aa23.23■■□□□ 1.31
TMC6-213ENST00000589933 F8W810 466 aa23.23■■□□□ 1.31
TMC6-213ENST00000589933 K7ERI5 159 aa23.23■■□□□ 1.31
TMC6-213ENST00000589933 LAD1O00515 517 aa23.23■■□□□ 1.31
TMC6-213ENST00000589933 TGM5O43548 720 aa23.23■■□□□ 1.31
TMC6-213ENST00000589933 RECQL4O94761 1208 aa23.23■■□□□ 1.31
TMC6-213ENST00000589933 SPATA31D3P0C874 917 aa23.23■■□□□ 1.31
TMC6-213ENST00000589933 CLCN5P51795 746 aa23.23■■□□□ 1.31
TMC6-213ENST00000589933 SPATA31D4Q6ZUB0 917 aa23.23■■□□□ 1.31
TMC6-213ENST00000589933 B3GALT6Q96L58 329 aa23.23■■□□□ 1.31
TMC6-213ENST00000589933 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.23■■□□□ 1.311e-6■■□□□ 12.2
TMC6-213ENST00000589933 DUSP12Q9UNI6 340 aa23.23■■□□□ 1.31
TMC6-213ENST00000589933 KIAA1024Q9UPX6 916 aa23.23■■□□□ 1.31
TMC6-213ENST00000589933 PHLPP2Q6ZVD8 1323 aa23.23■■□□□ 1.31
TMC6-213ENST00000589933 DOCK8Q8NF50 2099 aa23.22■■□□□ 1.31
TMC6-213ENST00000589933 MYBP10242 640 aa23.22■■□□□ 1.31
TMC6-213ENST00000589933 LIN9Q5TKA1 542 aa23.22■■□□□ 1.31
TMC6-213ENST00000589933 FAM171A1Q5VUB5 890 aa23.22■■□□□ 1.31
TMC6-213ENST00000589933 KRT79Q5XKE5 535 aa23.22■■□□□ 1.31
TMC6-213ENST00000589933 CEP57Q86XR8 500 aa23.22■■□□□ 1.31
TMC6-213ENST00000589933 SNX29Q8TEQ0 813 aa23.22■■□□□ 1.31
TMC6-213ENST00000589933 BSNDQ8WZ55 320 aa23.22■■□□□ 1.31
TMC6-213ENST00000589933 RABGGTAQ92696 567 aa23.22■■□□□ 1.31
TMC6-213ENST00000589933 PRKD2Q9BZL6 878 aa23.22■■□□□ 1.31
TMC6-213ENST00000589933 CCDC113Q9H0I3 377 aa23.22■■□□□ 1.31
TMC6-213ENST00000589933 NT5C3AQ9H0P0 336 aa23.22■■□□□ 1.31
TMC6-213ENST00000589933 SMOC2Q9H3U7 446 aa23.22■■□□□ 1.31
TMC6-213ENST00000589933 DDX19AQ9NUU7 478 aaKnown RBP23.22■■□□□ 1.31
TMC6-213ENST00000589933 DNM3Q9UQ16 869 aa23.22■■□□□ 1.31
TMC6-213ENST00000589933 RFPL2O75678 378 aa23.21■■□□□ 1.31
TMC6-213ENST00000589933 RFX1P22670 979 aa23.21■■□□□ 1.31
TMC6-213ENST00000589933 PSMD5Q16401 504 aa23.21■■□□□ 1.31
TMC6-213ENST00000589933 ATF7IP2Q5U623 682 aa23.21■■□□□ 1.31
TMC6-213ENST00000589933 FLCNQ8NFG4 579 aa23.21■■□□□ 1.31
TMC6-213ENST00000589933 GDAQ9Y2T3 454 aa23.21■■□□□ 1.31
TMC6-213ENST00000589933 CITO14578 2027 aa23.21■■□□□ 1.31
TMC6-213ENST00000589933 CCDC169A6NNP5 214 aa23.2■■□□□ 1.3
TMC6-213ENST00000589933 ZMYND10O75800 440 aa23.2■■□□□ 1.3
TMC6-213ENST00000589933 U2AF2P26368 475 aaKnown RBP eCLIP23.2■■□□□ 1.3
TMC6-213ENST00000589933 YARSP54577 528 aaKnown RBP23.2■■□□□ 1.3
TMC6-213ENST00000589933 PTGDRQ13258 359 aa23.2■■□□□ 1.3
TMC6-213ENST00000589933 PRSS55Q6UWB4 352 aaPredicted RBP23.2■■□□□ 1.3
TMC6-213ENST00000589933 HASPINQ8TF76 798 aa23.2■■□□□ 1.3
TMC6-213ENST00000589933 PIK3R5Q8WYR1 880 aa23.2■■□□□ 1.3
TMC6-213ENST00000589933 RTP3Q9BQQ7 232 aa23.2■■□□□ 1.3
TMC6-213ENST00000589933 TOPORSQ9NS56 1045 aaPredicted RBP23.2■■□□□ 1.3
TMC6-213ENST00000589933 EPS15L1Q9UBC2 864 aa23.2■■□□□ 1.3
TMC6-213ENST00000589933 KCNG1Q9UIX4 513 aa23.2■■□□□ 1.3
TMC6-213ENST00000589933 H0Y858 1186 aa23.19■■□□□ 1.3
TMC6-213ENST00000589933 PTGESO14684 152 aa23.19■■□□□ 1.3
TMC6-213ENST00000589933 TRAPPC3O43617 180 aa23.19■■□□□ 1.3
TMC6-213ENST00000589933 KIF4AO95239 1232 aa23.19■■□□□ 1.3
TMC6-213ENST00000589933 RPL17P18621 184 aaKnown RBP23.19■■□□□ 1.3
TMC6-213ENST00000589933 DMP1Q13316 513 aaPredicted RBP23.19■■□□□ 1.3
TMC6-213ENST00000589933 LILRA6Q6PI73 481 aa23.19■■□□□ 1.3
TMC6-213ENST00000589933 TMEM105Q8N8V8 129 aa23.19■■□□□ 1.3
TMC6-213ENST00000589933 FEZF2Q8TBJ5 459 aa23.19■■□□□ 1.3
TMC6-213ENST00000589933 DRC1Q96MC2 740 aa23.19■■□□□ 1.3
TMC6-213ENST00000589933 UROC1Q96N76 676 aa23.19■■□□□ 1.3
TMC6-213ENST00000589933 PHOX2BQ99453 314 aa23.19■■□□□ 1.3
TMC6-213ENST00000589933 CCDC94Q9BW85 323 aaPredicted RBP23.19■■□□□ 1.3
TMC6-213ENST00000589933 ZFP37Q9Y6Q3 630 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms