RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 ADPGKQ9BRR6 497 aa11.4□□□□□ -0.58
CHMP1B-202ENST00000588284 CRACR2AQ9BSW2 395 aa11.4□□□□□ -0.58
CHMP1B-202ENST00000588284 FAM49AQ9H0Q0 323 aaPredicted RBP11.4□□□□□ -0.58
CHMP1B-202ENST00000588284 ADAMTS10Q9H324 1103 aa11.4□□□□□ -0.58
CHMP1B-202ENST00000588284 TMEM8AQ9HCN3 771 aa11.4□□□□□ -0.58
CHMP1B-202ENST00000588284 PTPRHQ9HD43 1115 aa11.4□□□□□ -0.58
CHMP1B-202ENST00000588284 KCND1Q9NSA2 647 aa11.4□□□□□ -0.58
CHMP1B-202ENST00000588284 GTF2IRD1Q9UHL9 959 aa11.4□□□□□ -0.58
CHMP1B-202ENST00000588284 ZSCAN12O43309 604 aa11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 GPR32O75388 356 aa11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 ADRB2P07550 413 aa11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 CCDC172P0C7W6 258 aa11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 TRIM49P0CI25 452 aa11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 TRIM49CP0CI26 452 aa11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 SLC9A1P19634 815 aa11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 RFX1P22670 979 aa11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 EIF4BP23588 611 aaKnown RBP11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 HNRNPH3P31942 346 aaKnown RBP11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 KLK7P49862 253 aa11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 MXI1P50539 228 aa11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 CRYBB1P53674 252 aaPredicted RBP11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 POLR2FP61218 127 aaKnown RBP11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 CLDN10P78369 228 aa11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 NOLC1Q14978 699 aaKnown RBP eCLIP11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 RRAGAQ7L523 313 aa11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 RPAINQ86UA6 219 aa11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 CCDC170Q8IYT3 715 aa11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 CCDC127Q96BQ5 260 aa11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 AGPAT5Q9NUQ2 364 aa11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 WBP1LQ9NX94 342 aa11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 RBAKQ9NYW8 714 aaPredicted RBP11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 GCNT4Q9P109 453 aa11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 ANKFY1Q9P2R3 1169 aa11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 PYCARDQ9ULZ3 195 aa11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 PLAGL2Q9UPG8 496 aa11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 USP20Q9Y2K6 914 aa11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 COQ4Q9Y3A0 265 aa11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 BOLA1Q9Y3E2 137 aa11.39□□□□□ -0.59
CHMP1B-202ENST00000588284 THSD7BQ9C0I4 1608 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 CNTNAP2Q9UHC6 1331 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 A0A1B0GUA9 196 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 RNF225M0QZC1 329 aaPredicted RBP11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 NOL4O94818 638 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 IL18RAPO95256 599 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 CLTAP09496 248 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 DARSP14868 501 aaKnown RBP11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 UCHL3P15374 230 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 TNNI1P19237 187 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 CYLC1P35663 651 aaPredicted RBP11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 GCLMP48507 274 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 ACOT2P49753 483 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 ACLYP53396 1101 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 DLG4P78352 724 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 PPP3CAQ08209 521 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 GOLGA8FQ08AF8 430 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 GOLGA8DPQ0D2H9 430 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 MEA1Q16626 185 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 AMHR2Q16671 573 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 KIZQ2M2Z5 673 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 ZNF568Q3ZCX4 644 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 FAM47CQ5HY64 1035 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 SFMBT2Q5VUG0 894 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 SMYD5Q6GMV2 418 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 PDXDC1Q6P996 788 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 CRELD2Q6UXH1 353 aaPredicted RBP11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 RUFY4Q6ZNE9 571 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 CATSPER4Q7RTX7 472 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 ZBTB33Q86T24 672 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 TMEM139Q8IV31 216 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 BRSK2Q8IWQ3 736 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 ZSWIM2Q8NEG5 633 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 ZNF668Q96K58 619 aaPredicted RBP11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 GLT1D1Q96MS3 346 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 SPAG5Q96R06 1193 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 CELF4Q9BZC1 486 aaKnown RBP11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 TMEM117Q9H0C3 514 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 INTS2Q9H0H0 1204 aaKnown RBP11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 MINDY3Q9H8M7 445 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 RPF1Q9H9Y2 349 aaKnown RBP11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 CPSF3Q9UKF6 684 aaKnown RBP11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 PTPN22Q9Y2R2 807 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 PTCH2Q9Y6C5 1203 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 BZW2Q9Y6E2 419 aaKnown RBP11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 EVPLQ92817 2033 aa11.38□□□□□ -0.59
CHMP1B-202ENST00000588284 GOLGA6L9A6NEM1 432 aa11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 LRRIQ3A6PVS8 624 aaPredicted RBP11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 TULP1O00294 542 aaPredicted RBP11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 ABLIM1O14639 778 aa11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 ZC3H11AO75152 810 aaKnown RBP eCLIP11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 TUBB4AP04350 444 aa11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 DLATP10515 647 aaKnown RBP11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 HARSP12081 509 aaKnown RBP11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 ARF4P18085 180 aaPredicted RBP11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 STAT1P42224 750 aa11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 ZNF200P98182 395 aaPredicted RBP11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 ITGA7Q13683 1181 aa11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 DCAF4L1Q3SXM0 396 aa11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 SLC9C1Q4G0N8 1177 aa11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 CBWD6Q4V339 395 aa11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 EPC2Q52LR7 807 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms