RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 ZNF689Q96CS4 500 aaPredicted RBP11.68□□□□□ -0.54
SMARCA4-213ENST00000587988 PGBD4Q96DM1 585 aa11.68□□□□□ -0.54
SMARCA4-213ENST00000587988 DHTKD1Q96HY7 919 aaPredicted RBP11.68□□□□□ -0.54
SMARCA4-213ENST00000587988 ACAP3Q96P50 834 aa11.68□□□□□ -0.54
SMARCA4-213ENST00000587988 MED15Q96RN5 788 aa11.68□□□□□ -0.54
SMARCA4-213ENST00000587988 RC3H2Q9HBD1 1191 aaKnown RBP11.68□□□□□ -0.54
SMARCA4-213ENST00000587988 DMAC2Q9NW81 257 aa11.68□□□□□ -0.54
SMARCA4-213ENST00000587988 MIOSQ9NXC5 875 aa11.68□□□□□ -0.54
SMARCA4-213ENST00000587988 HSPBP1Q9NZL4 362 aa11.68□□□□□ -0.54
SMARCA4-213ENST00000587988 FNDC1Q4ZHG4 1894 aaPredicted RBP11.68□□□□□ -0.54
SMARCA4-213ENST00000587988 TRIP11Q15643 1979 aa11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 SYCE3A1L190 88 aa11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 PSMA7O14818 248 aa11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 CALUO43852 315 aaPredicted RBP11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 NR3C1P04150 777 aa11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 CXCL8P10145 99 aa11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 MYOGP15173 224 aa11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 CASP4P49662 377 aa11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 WNT7BP56706 349 aa11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 STIM1Q13586 685 aa11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 ENOX2Q16206 610 aaKnown RBP11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 SLC10A6Q3KNW5 377 aa11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 ZSCAN23Q3MJ62 389 aa11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 PAN2Q504Q3 1202 aaKnown RBP11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 GPD1LQ8N335 351 aa11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 RDH13Q8NBN7 331 aa11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 GSTCDQ8NEC7 633 aa11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 NOC3LQ8WTT2 800 aaKnown RBP11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 EEF2KMTQ96G04 330 aa11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 FBXL18Q96ME1 805 aa11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 ZFP42Q96MM3 310 aa11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 CASD1Q96PB1 797 aa11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 GAD1Q99259 594 aa11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 DUSP9Q99956 384 aaKnown RBP11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 FAM213AQ9BRX8 229 aa11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 FUCA2Q9BTY2 467 aa11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 CCDC94Q9BW85 323 aaPredicted RBP11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 RSAD1Q9HA92 442 aa11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 CGNQ9P2M7 1197 aaKnown RBP11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 CPSF3Q9UKF6 684 aaKnown RBP11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 INPP5FQ9Y2H2 1132 aa11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 GIT1Q9Y2X7 761 aa11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 GBF1Q92538 1859 aa11.67□□□□□ -0.54
SMARCA4-213ENST00000587988 CITO14578 2027 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 LCHNA4D1U4 455 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 ARL5CA6NH57 179 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 TBKBP1A7MCY6 615 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 EXTL3O43909 919 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 LETM1O95202 739 aaPredicted RBP11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 LDHAP00338 332 aaKnown RBP11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 ADRB2P07550 413 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 CLTAP09496 248 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 PBX2P40425 430 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 MLH1P40692 756 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 PPP1R2P41236 205 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 HTRA4P83105 476 aaPredicted RBP11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 TYRO3Q06418 890 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 PAK1Q13153 545 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 ADAM9Q13443 819 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 NFIL3Q16649 462 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 EDRF1Q3B7T1 1238 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 TTI2Q6NXR4 508 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 ALKAL1Q6UXT8 129 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 LRRC55Q6ZSA7 311 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 C11orf57Q6ZUT1 292 aaPredicted RBP11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 CBWD2Q8IUF1 395 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 SLC9A9Q8IVB4 645 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 HACE1Q8IYU2 909 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 TMEM130Q8N3G9 435 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 XXYLT1Q8NBI6 393 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 GOLGA5Q8TBA6 731 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 TMEM174Q8WUU8 243 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 SNX27Q96L92 541 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 ZBED2Q9BTP6 218 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 TMEM117Q9H0C3 514 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 RPF1Q9H9Y2 349 aaKnown RBP11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 RNF216Q9NWF9 866 aaPredicted RBP11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 HCSTQ9UBK5 93 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 PLAGL2Q9UPG8 496 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 ANK1P16157 1881 aa11.66□□□□□ -0.54
SMARCA4-213ENST00000587988 TTC26A0AVF1 554 aa11.65□□□□□ -0.54
SMARCA4-213ENST00000587988 LACTBL1A8MY62 500 aa11.65□□□□□ -0.54
SMARCA4-213ENST00000587988 PTGESO14684 152 aa11.65□□□□□ -0.54
SMARCA4-213ENST00000587988 KIAA0391O15091 583 aaKnown RBP11.65□□□□□ -0.54
SMARCA4-213ENST00000587988 INPPL1O15357 1258 aa11.65□□□□□ -0.54
SMARCA4-213ENST00000587988 HOXA2O43364 376 aa11.65□□□□□ -0.54
SMARCA4-213ENST00000587988 TLL1O43897 1013 aa11.65□□□□□ -0.54
SMARCA4-213ENST00000587988 EXOC3O60645 756 aa11.65□□□□□ -0.54
SMARCA4-213ENST00000587988 ARHGEF15O94989 841 aa11.65□□□□□ -0.54
SMARCA4-213ENST00000587988 POMCP01189 267 aa11.65□□□□□ -0.54
SMARCA4-213ENST00000587988 NR2F2P24468 414 aa11.65□□□□□ -0.54
SMARCA4-213ENST00000587988 SCNN1GP51170 649 aa11.65□□□□□ -0.54
SMARCA4-213ENST00000587988 YARSP54577 528 aaKnown RBP11.65□□□□□ -0.54
SMARCA4-213ENST00000587988 LRRC63Q05C16 580 aa11.65□□□□□ -0.54
SMARCA4-213ENST00000587988 SPAG1Q07617 926 aa11.65□□□□□ -0.54
SMARCA4-213ENST00000587988 STX1AQ16623 288 aa11.65□□□□□ -0.54
SMARCA4-213ENST00000587988 XKR4Q5GH76 650 aa11.65□□□□□ -0.54
SMARCA4-213ENST00000587988 NOMO2Q5JPE7 1267 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms