RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 GPR62Q9BZJ7 368 aa22.03■■□□□ 1.12
TRAPPC6A-203ENST00000587818 MRPL17Q9NRX2 175 aaKnown RBP22.03■■□□□ 1.12
TRAPPC6A-203ENST00000587818 BLOC1S4Q9NUP1 217 aa22.03■■□□□ 1.12
TRAPPC6A-203ENST00000587818 ARHGAP28Q9P2N2 729 aa22.03■■□□□ 1.12
TRAPPC6A-203ENST00000587818 FAM86C2PA6NEL3 165 aa22.02■■□□□ 1.12
TRAPPC6A-203ENST00000587818 CASTOR2A6NHX0 329 aa22.02■■□□□ 1.12
TRAPPC6A-203ENST00000587818 MYBP10242 640 aa22.02■■□□□ 1.12
TRAPPC6A-203ENST00000587818 PLS3P13797 630 aa22.02■■□□□ 1.12
TRAPPC6A-203ENST00000587818 PLCG1P19174 1290 aa22.02■■□□□ 1.12
TRAPPC6A-203ENST00000587818 KLRC2P26717 231 aa22.02■■□□□ 1.12
TRAPPC6A-203ENST00000587818 GIT2Q14161 759 aa22.02■■□□□ 1.12
TRAPPC6A-203ENST00000587818 DCAF4L1Q3SXM0 396 aa22.02■■□□□ 1.12
TRAPPC6A-203ENST00000587818 GPBP1Q86WP2 473 aa22.02■■□□□ 1.12
TRAPPC6A-203ENST00000587818 RASSF8Q8NHQ8 419 aa22.02■■□□□ 1.12
TRAPPC6A-203ENST00000587818 SUSD6Q92537 303 aa22.02■■□□□ 1.12
TRAPPC6A-203ENST00000587818 CLIC6Q96NY7 704 aa22.02■■□□□ 1.12
TRAPPC6A-203ENST00000587818 HERC2P3Q9BVR0 1158 aa22.02■■□□□ 1.12
TRAPPC6A-203ENST00000587818 RBM19Q9Y4C8 960 aaKnown RBP22.02■■□□□ 1.12
TRAPPC6A-203ENST00000587818 TADA2AO75478 443 aa22.01■■□□□ 1.11
TRAPPC6A-203ENST00000587818 EFEMP2O95967 443 aa22.01■■□□□ 1.11
TRAPPC6A-203ENST00000587818 THP07101 528 aa22.01■■□□□ 1.11
TRAPPC6A-203ENST00000587818 HARSP12081 509 aaKnown RBP22.01■■□□□ 1.11
TRAPPC6A-203ENST00000587818 GLRA4Q5JXX5 417 aa22.01■■□□□ 1.11
TRAPPC6A-203ENST00000587818 RARS2Q5T160 578 aaKnown RBP22.01■■□□□ 1.11
TRAPPC6A-203ENST00000587818 FOXD4L5Q5VV16 416 aaPredicted RBP22.01■■□□□ 1.11
TRAPPC6A-203ENST00000587818 KIAA0319Q5VV43 1072 aa22.01■■□□□ 1.11
TRAPPC6A-203ENST00000587818 KCTD17Q8N5Z5 321 aa22.01■■□□□ 1.11
TRAPPC6A-203ENST00000587818 HASPINQ8TF76 798 aa22.01■■□□□ 1.11
TRAPPC6A-203ENST00000587818 FOXD4L4Q8WXT5 416 aaPredicted RBP22.01■■□□□ 1.11
TRAPPC6A-203ENST00000587818 NTPCRQ9BSD7 190 aaKnown RBP22.01■■□□□ 1.11
TRAPPC6A-203ENST00000587818 TCHPQ9BT92 498 aa22.01■■□□□ 1.11
TRAPPC6A-203ENST00000587818 TIPINQ9BVW5 301 aa22.01■■□□□ 1.11
TRAPPC6A-203ENST00000587818 EMILIN2Q9BXX0 1053 aa22.01■■□□□ 1.11
TRAPPC6A-203ENST00000587818 MRPL4Q9BYD3 311 aaKnown RBP22.01■■□□□ 1.11
TRAPPC6A-203ENST00000587818 CDT1Q9H211 546 aa22.01■■□□□ 1.11
TRAPPC6A-203ENST00000587818 C17orf75Q9HAS0 396 aa22.01■■□□□ 1.11
TRAPPC6A-203ENST00000587818 PTPRHQ9HD43 1115 aa22.01■■□□□ 1.11
TRAPPC6A-203ENST00000587818 RAPGEFL1Q9UHV5 662 aa22.01■■□□□ 1.11
TRAPPC6A-203ENST00000587818 PHLPP2Q6ZVD8 1323 aa22.01■■□□□ 1.11
TRAPPC6A-203ENST00000587818 STX6O43752 255 aa22■■□□□ 1.11
TRAPPC6A-203ENST00000587818 URODP06132 367 aa22■■□□□ 1.11
TRAPPC6A-203ENST00000587818 HOXB8P17481 243 aaPredicted RBP22■■□□□ 1.11
TRAPPC6A-203ENST00000587818 SP100P23497 879 aaPredicted RBP22■■□□□ 1.11
TRAPPC6A-203ENST00000587818 IGFBP6P24592 240 aaPredicted RBP22■■□□□ 1.11
TRAPPC6A-203ENST00000587818 TUSC3Q13454 348 aa22■■□□□ 1.11
TRAPPC6A-203ENST00000587818 FUT10Q6P4F1 479 aa22■■□□□ 1.11
TRAPPC6A-203ENST00000587818 RNF135Q8IUD6 432 aa22■■□□□ 1.11
TRAPPC6A-203ENST00000587818 RNF168Q8IYW5 571 aaPredicted RBP22■■□□□ 1.11
TRAPPC6A-203ENST00000587818 TMEM161BQ8NDZ6 487 aa22■■□□□ 1.11
TRAPPC6A-203ENST00000587818 SPIRE2Q8WWL2 714 aa22■■□□□ 1.11
TRAPPC6A-203ENST00000587818 RAD54LQ92698 747 aa22■■□□□ 1.11
TRAPPC6A-203ENST00000587818 SNX21Q969T3 373 aa22■■□□□ 1.11
TRAPPC6A-203ENST00000587818 USP28Q96RU2 1077 aa22■■□□□ 1.11
TRAPPC6A-203ENST00000587818 PHF7Q9BWX1 381 aaPredicted RBP22■■□□□ 1.11
TRAPPC6A-203ENST00000587818 C1QTNF1Q9BXJ1 281 aa22■■□□□ 1.11
TRAPPC6A-203ENST00000587818 FBXO2Q9UK22 296 aaPredicted RBP22■■□□□ 1.11
TRAPPC6A-203ENST00000587818 ADAM28Q9UKQ2 775 aa22■■□□□ 1.11
TRAPPC6A-203ENST00000587818 SLC26A4O43511 780 aa21.99■■□□□ 1.11
TRAPPC6A-203ENST00000587818 GLUD2P49448 558 aa21.99■■□□□ 1.11
TRAPPC6A-203ENST00000587818 SMTNP53814 917 aa21.99■■□□□ 1.11
TRAPPC6A-203ENST00000587818 HSP90AA2PQ14568 343 aaPredicted RBP21.99■■□□□ 1.11
TRAPPC6A-203ENST00000587818 CBX2Q14781 532 aaPredicted RBP21.99■■□□□ 1.11
TRAPPC6A-203ENST00000587818 NAB2Q15742 525 aa21.99■■□□□ 1.11
TRAPPC6A-203ENST00000587818 ZNF568Q3ZCX4 644 aa21.99■■□□□ 1.11
TRAPPC6A-203ENST00000587818 TPRNQ4KMQ1 711 aa21.99■■□□□ 1.11
TRAPPC6A-203ENST00000587818 SEZ6Q53EL9 994 aa21.99■■□□□ 1.11
TRAPPC6A-203ENST00000587818 KIAA1841Q6NSI8 718 aa21.99■■□□□ 1.11
TRAPPC6A-203ENST00000587818 SPRYD3Q8NCJ5 442 aa21.99■■□□□ 1.11
TRAPPC6A-203ENST00000587818 POP1Q99575 1024 aaKnown RBP21.99■■□□□ 1.11
TRAPPC6A-203ENST00000587818 REEP2Q9BRK0 252 aa21.99■■□□□ 1.11
TRAPPC6A-203ENST00000587818 PANK2Q9BZ23 570 aa21.99■■□□□ 1.11
TRAPPC6A-203ENST00000587818 CCSER1Q9C0I3 900 aa21.99■■□□□ 1.11
TRAPPC6A-203ENST00000587818 ZHX3Q9H4I2 956 aa21.99■■□□□ 1.11
TRAPPC6A-203ENST00000587818 C11orf16Q9NQ32 467 aa21.99■■□□□ 1.11
TRAPPC6A-203ENST00000587818 LOC730098B7Z3J9 87 aa21.98■■□□□ 1.11
TRAPPC6A-203ENST00000587818 ABLIM1O14639 778 aa21.98■■□□□ 1.11
TRAPPC6A-203ENST00000587818 TEX28O15482 410 aa21.98■■□□□ 1.11
TRAPPC6A-203ENST00000587818 KRT18P05783 430 aaKnown RBP21.98■■□□□ 1.11
TRAPPC6A-203ENST00000587818 SPATA31D3P0C874 917 aa21.98■■□□□ 1.11
TRAPPC6A-203ENST00000587818 MAPTP10636 758 aaKnown RBP21.98■■□□□ 1.11
TRAPPC6A-203ENST00000587818 STRN3Q13033 797 aa21.98■■□□□ 1.11
TRAPPC6A-203ENST00000587818 TMC5Q6UXY8 1006 aa21.98■■□□□ 1.11
TRAPPC6A-203ENST00000587818 SPATA31D4Q6ZUB0 917 aa21.98■■□□□ 1.11
TRAPPC6A-203ENST00000587818 GLYCTKQ8IVS8 523 aa21.98■■□□□ 1.11
TRAPPC6A-203ENST00000587818 MYCT1Q8N699 235 aa21.98■■□□□ 1.11
TRAPPC6A-203ENST00000587818 FBXL18Q96ME1 805 aa21.98■■□□□ 1.11
TRAPPC6A-203ENST00000587818 LRFN3Q9BTN0 628 aa21.98■■□□□ 1.11
TRAPPC6A-203ENST00000587818 ADAM7Q9H2U9 754 aa21.98■■□□□ 1.11
TRAPPC6A-203ENST00000587818 CHST7Q9NS84 486 aa21.98■■□□□ 1.11
TRAPPC6A-203ENST00000587818 KCND2Q9NZV8 630 aa21.98■■□□□ 1.11
TRAPPC6A-203ENST00000587818 TFIP11Q9UBB9 837 aaKnown RBP21.98■■□□□ 1.11
TRAPPC6A-203ENST00000587818 STK39Q9UEW8 545 aa21.98■■□□□ 1.11
TRAPPC6A-203ENST00000587818 MUTYHQ9UIF7 546 aa21.98■■□□□ 1.11
TRAPPC6A-203ENST00000587818 SRPRBQ9Y5M8 271 aaKnown RBP21.98■■□□□ 1.11
TRAPPC6A-203ENST00000587818 ZMYM2Q9UBW7 1377 aa21.98■■□□□ 1.11
TRAPPC6A-203ENST00000587818 KIF4AO95239 1232 aa21.97■■□□□ 1.11
TRAPPC6A-203ENST00000587818 RPL17P18621 184 aaKnown RBP21.97■■□□□ 1.11
TRAPPC6A-203ENST00000587818 DDIT3P35638 169 aa21.97■■□□□ 1.11
TRAPPC6A-203ENST00000587818 GRM5P41594 1212 aa21.97■■□□□ 1.11
TRAPPC6A-203ENST00000587818 CLCN4P51793 760 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms