RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 MIOSQ9NXC5 875 aa23.46■■□□□ 1.35
RETREG3-202ENST00000585726 ZC3H11AO75152 810 aaKnown RBP eCLIP23.45■■□□□ 1.34
RETREG3-202ENST00000585726 YARSP54577 528 aaKnown RBP23.45■■□□□ 1.34
RETREG3-202ENST00000585726 EHHADHQ08426 723 aa23.45■■□□□ 1.34
RETREG3-202ENST00000585726 CLEC17AQ6ZS10 378 aa23.45■■□□□ 1.34
RETREG3-202ENST00000585726 ZNF280BQ86YH2 543 aa23.45■■□□□ 1.34
RETREG3-202ENST00000585726 NELFCDQ8IXH7 590 aa23.45■■□□□ 1.34
RETREG3-202ENST00000585726 COLGALT1Q8NBJ5 622 aa23.45■■□□□ 1.34
RETREG3-202ENST00000585726 CCDC47Q96A33 483 aaKnown RBP23.45■■□□□ 1.34
RETREG3-202ENST00000585726 ACAP3Q96P50 834 aa23.45■■□□□ 1.34
RETREG3-202ENST00000585726 MSTO1Q9BUK6 570 aa23.45■■□□□ 1.34
RETREG3-202ENST00000585726 CXCL16Q9H2A7 254 aa23.45■■□□□ 1.34
RETREG3-202ENST00000585726 NRDE2Q9H7Z3 1164 aa23.45■■□□□ 1.34
RETREG3-202ENST00000585726 KANSL3Q9P2N6 904 aa23.45■■□□□ 1.34
RETREG3-202ENST00000585726 PCDHB12Q9Y5F1 795 aa23.45■■□□□ 1.34
RETREG3-202ENST00000585726 DDHD2O94830 711 aa23.44■■□□□ 1.34
RETREG3-202ENST00000585726 LAG3P18627 525 aa23.44■■□□□ 1.34
RETREG3-202ENST00000585726 IGFBP4P22692 258 aa23.44■■□□□ 1.34
RETREG3-202ENST00000585726 GPM6BQ13491 265 aa23.44■■□□□ 1.34
RETREG3-202ENST00000585726 ERCC4Q92889 916 aaPredicted RBP23.44■■□□□ 1.34
RETREG3-202ENST00000585726 TIGD1Q96MW7 591 aa23.44■■□□□ 1.34
RETREG3-202ENST00000585726 GAS2L1Q99501 681 aaPredicted RBP23.44■■□□□ 1.34
RETREG3-202ENST00000585726 TMEM206Q9H813 350 aa23.44■■□□□ 1.34
RETREG3-202ENST00000585726 TULP1O00294 542 aaPredicted RBP23.43■■□□□ 1.34
RETREG3-202ENST00000585726 CSPG5O95196 566 aa23.43■■□□□ 1.34
RETREG3-202ENST00000585726 BCAR1P56945 870 aa23.43■■□□□ 1.34
RETREG3-202ENST00000585726 STK4Q13043 487 aa23.43■■□□□ 1.34
RETREG3-202ENST00000585726 SLFN12LQ6IEE8 588 aa23.43■■□□□ 1.34
RETREG3-202ENST00000585726 KCNT2Q6UVM3 1135 aa23.43■■□□□ 1.34
RETREG3-202ENST00000585726 EPM2AIP1Q7L775 607 aaPredicted RBP23.43■■□□□ 1.34
RETREG3-202ENST00000585726 KLHL23Q8NBE8 558 aa23.43■■□□□ 1.34
RETREG3-202ENST00000585726 GSTCDQ8NEC7 633 aa23.43■■□□□ 1.34
RETREG3-202ENST00000585726 RSPH1Q8WYR4 309 aa23.43■■□□□ 1.34
RETREG3-202ENST00000585726 POMGNT1Q8WZA1 660 aa23.43■■□□□ 1.34
RETREG3-202ENST00000585726 ZNF558Q96NG5 402 aa23.43■■□□□ 1.34
RETREG3-202ENST00000585726 DNAJB4Q9UDY4 337 aa23.43■■□□□ 1.34
RETREG3-202ENST00000585726 HOOK1Q9UJC3 728 aaKnown RBP23.43■■□□□ 1.34
RETREG3-202ENST00000585726 A0A0B4J269 797 aa23.42■■□□□ 1.34
RETREG3-202ENST00000585726 NT5C1B-RDH14C9J2C7 533 aa23.42■■□□□ 1.34
RETREG3-202ENST00000585726 EIF3DO15371 548 aaKnown RBP eCLIP23.42■■□□□ 1.34
RETREG3-202ENST00000585726 RB1P06400 928 aa23.42■■□□□ 1.34
RETREG3-202ENST00000585726 TNFSF9P41273 254 aa23.42■■□□□ 1.34
RETREG3-202ENST00000585726 PSMD2Q13200 908 aa23.42■■□□□ 1.34
RETREG3-202ENST00000585726 GLRA4Q5JXX5 417 aa23.42■■□□□ 1.34
RETREG3-202ENST00000585726 ZBTB41Q5SVQ8 909 aa23.42■■□□□ 1.34
RETREG3-202ENST00000585726 ZNF507Q8TCN5 953 aa23.42■■□□□ 1.34
RETREG3-202ENST00000585726 SCFD1Q8WVM8 642 aa23.42■■□□□ 1.34
RETREG3-202ENST00000585726 C11orf84Q9BUA3 381 aaPredicted RBP23.42■■□□□ 1.34
RETREG3-202ENST00000585726 PLVAPQ9BX97 442 aa23.42■■□□□ 1.34
RETREG3-202ENST00000585726 ALG13Q9NP73 1137 aaKnown RBP23.42■■□□□ 1.34
RETREG3-202ENST00000585726 TOPORSQ9NS56 1045 aaPredicted RBP23.42■■□□□ 1.34
RETREG3-202ENST00000585726 PLAGL2Q9UPG8 496 aa23.42■■□□□ 1.34
RETREG3-202ENST00000585726 C5orf67F2Z3F1 127 aa23.41■■□□□ 1.34
RETREG3-202ENST00000585726 H3BNC9 293 aa23.41■■□□□ 1.34
RETREG3-202ENST00000585726 OGTO15294 1046 aa23.41■■□□□ 1.34
RETREG3-202ENST00000585726 INPPL1O15357 1258 aa23.41■■□□□ 1.34
RETREG3-202ENST00000585726 B4GALT3O60512 393 aa23.41■■□□□ 1.34
RETREG3-202ENST00000585726 FOSL2P15408 326 aa23.41■■□□□ 1.34
RETREG3-202ENST00000585726 HOXD13P35453 343 aa23.41■■□□□ 1.34
RETREG3-202ENST00000585726 ALDH7A1P49419 539 aaKnown RBP23.41■■□□□ 1.34
RETREG3-202ENST00000585726 ADGRE1Q14246 886 aa23.41■■□□□ 1.34
RETREG3-202ENST00000585726 KIAA0895Q8NCT3 520 aa23.41■■□□□ 1.34
RETREG3-202ENST00000585726 NOC3LQ8WTT2 800 aaKnown RBP23.41■■□□□ 1.34
RETREG3-202ENST00000585726 AGO2Q9UKV8 859 aaKnown RBP23.41■■□□□ 1.34
RETREG3-202ENST00000585726 SZT2Q5T011 3432 aa23.4■■□□□ 1.34
RETREG3-202ENST00000585726 CHD9Q3L8U1 2897 aa23.4■■□□□ 1.34
RETREG3-202ENST00000585726 PTGESO14684 152 aa23.4■■□□□ 1.34
RETREG3-202ENST00000585726 LPXNO60711 386 aa23.4■■□□□ 1.34
RETREG3-202ENST00000585726 CXCL8P10145 99 aa23.4■■□□□ 1.34
RETREG3-202ENST00000585726 ADSSP30520 456 aa23.4■■□□□ 1.34
RETREG3-202ENST00000585726 SLC11A1P49279 550 aa23.4■■□□□ 1.34
RETREG3-202ENST00000585726 ACOT2P49753 483 aa23.4■■□□□ 1.34
RETREG3-202ENST00000585726 GRIK3Q13003 919 aa23.4■■□□□ 1.34
RETREG3-202ENST00000585726 FAM212AQ96EL1 285 aa23.4■■□□□ 1.34
RETREG3-202ENST00000585726 PCIF1Q9H4Z3 704 aa23.4■■□□□ 1.34
RETREG3-202ENST00000585726 STYXL1Q9Y6J8 313 aa23.4■■□□□ 1.34
RETREG3-202ENST00000585726 NLRC5Q86WI3 1866 aa23.4■■□□□ 1.34
RETREG3-202ENST00000585726 KIAA1671Q9BY89 1806 aa23.4■■□□□ 1.34
RETREG3-202ENST00000585726 GRM6O15303 877 aa23.39■■□□□ 1.33
RETREG3-202ENST00000585726 FGF18O76093 207 aa23.39■■□□□ 1.33
RETREG3-202ENST00000585726 RHOBTB3O94955 611 aa23.39■■□□□ 1.33
RETREG3-202ENST00000585726 SMC2O95347 1197 aa23.39■■□□□ 1.33
RETREG3-202ENST00000585726 ITGB1P05556 798 aa23.39■■□□□ 1.33
RETREG3-202ENST00000585726 THP07101 528 aa23.39■■□□□ 1.33
RETREG3-202ENST00000585726 GALTP07902 379 aa23.39■■□□□ 1.33
RETREG3-202ENST00000585726 CLTAP09496 248 aa23.39■■□□□ 1.33
RETREG3-202ENST00000585726 OR1G1P47890 313 aa23.39■■□□□ 1.33
RETREG3-202ENST00000585726 KCNB1Q14721 858 aa23.39■■□□□ 1.33
RETREG3-202ENST00000585726 ARMCX5Q6P1M9 558 aa23.39■■□□□ 1.33
RETREG3-202ENST00000585726 MICALL1Q8N3F8 863 aa23.39■■□□□ 1.33
RETREG3-202ENST00000585726 RABGGTAQ92696 567 aa23.39■■□□□ 1.33
RETREG3-202ENST00000585726 P2RX5Q93086 422 aa23.39■■□□□ 1.33
RETREG3-202ENST00000585726 SMARCE1Q969G3 411 aa23.39■■□□□ 1.33
RETREG3-202ENST00000585726 SAAL1Q96ER3 474 aa23.39■■□□□ 1.33
RETREG3-202ENST00000585726 SNX27Q96L92 541 aa23.39■■□□□ 1.33
RETREG3-202ENST00000585726 CBWD1Q9BRT8 395 aa23.39■■□□□ 1.33
RETREG3-202ENST00000585726 RPF1Q9H9Y2 349 aaKnown RBP23.39■■□□□ 1.33
RETREG3-202ENST00000585726 LMBRD1Q9NUN5 540 aa23.39■■□□□ 1.33
RETREG3-202ENST00000585726 SPG21Q9NZD8 308 aa23.39■■□□□ 1.33
RETREG3-202ENST00000585726 CACNG4Q9UBN1 327 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms