RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 UMODL1Q5DID0 1318 aa17.55■□□□□ 0.4
SS18-226ENST00000585241 NBNO60934 754 aa17.55■□□□□ 0.4
SS18-226ENST00000585241 NPTXRO95502 500 aa17.55■□□□□ 0.4
SS18-226ENST00000585241 CXCL10P02778 98 aa17.55■□□□□ 0.4
SS18-226ENST00000585241 TPM2P07951 284 aa17.55■□□□□ 0.4
SS18-226ENST00000585241 HARSP12081 509 aaKnown RBP17.55■□□□□ 0.4
SS18-226ENST00000585241 KRT13P13646 458 aa17.55■□□□□ 0.4
SS18-226ENST00000585241 TNFSF9P41273 254 aa17.55■□□□□ 0.4
SS18-226ENST00000585241 ACOT2P49753 483 aa17.55■□□□□ 0.4
SS18-226ENST00000585241 VAMP7P51809 220 aa17.55■□□□□ 0.4
SS18-226ENST00000585241 PLCB2Q00722 1185 aa17.55■□□□□ 0.4
SS18-226ENST00000585241 NFX1Q12986 1120 aaKnown RBP17.55■□□□□ 0.4
SS18-226ENST00000585241 C1orf220Q5T0J3 134 aa17.55■□□□□ 0.4
SS18-226ENST00000585241 CEP120Q8N960 986 aa17.55■□□□□ 0.4
SS18-226ENST00000585241 RDH13Q8NBN7 331 aa17.55■□□□□ 0.4
SS18-226ENST00000585241 EIF2AQ9BY44 585 aaKnown RBP17.55■□□□□ 0.4
SS18-226ENST00000585241 VPS16Q9H269 839 aa17.55■□□□□ 0.4
SS18-226ENST00000585241 TMX1Q9H3N1 280 aa17.55■□□□□ 0.4
SS18-226ENST00000585241 NDST4Q9H3R1 872 aa17.55■□□□□ 0.4
SS18-226ENST00000585241 RBAKQ9NYW8 714 aaPredicted RBP17.55■□□□□ 0.4
SS18-226ENST00000585241 KIAA0355O15063 1070 aa17.54■□□□□ 0.4
SS18-226ENST00000585241 PMM2O15305 246 aa17.54■□□□□ 0.4
SS18-226ENST00000585241 ADCY5O95622 1261 aa17.54■□□□□ 0.4
SS18-226ENST00000585241 AFPP02771 609 aaKnown RBP17.54■□□□□ 0.4
SS18-226ENST00000585241 TPM3P06753 285 aa17.54■□□□□ 0.4
SS18-226ENST00000585241 STAG3L1P0CL83 205 aa17.54■□□□□ 0.4
SS18-226ENST00000585241 CDC25BP30305 580 aa17.54■□□□□ 0.4
SS18-226ENST00000585241 PBX1P40424 430 aa17.54■□□□□ 0.4
SS18-226ENST00000585241 ENOX2Q16206 610 aaKnown RBP17.54■□□□□ 0.4
SS18-226ENST00000585241 PLEKHG4Q58EX7 1191 aa17.54■□□□□ 0.4
SS18-226ENST00000585241 USP37Q86T82 979 aa17.54■□□□□ 0.4
SS18-226ENST00000585241 CREBRFQ8IUR6 639 aa17.54■□□□□ 0.4
SS18-226ENST00000585241 THNSL1Q8IYQ7 743 aa17.54■□□□□ 0.4
SS18-226ENST00000585241 TMEM39AQ9NV64 488 aa17.54■□□□□ 0.4
SS18-226ENST00000585241 RALGAPA2Q2PPJ7 1873 aa17.53■□□□□ 0.4
SS18-226ENST00000585241 A0A1W2PQC6 194 aa17.53■□□□□ 0.4
SS18-226ENST00000585241 LRRIQ3A6PVS8 624 aaPredicted RBP17.53■□□□□ 0.4
SS18-226ENST00000585241 MEFVO15553 781 aaPredicted RBP17.53■□□□□ 0.4
SS18-226ENST00000585241 TEX33O43247 280 aa17.53■□□□□ 0.4
SS18-226ENST00000585241 MGEA5O60502 916 aa17.53■□□□□ 0.4
SS18-226ENST00000585241 ZNF623O75123 536 aa17.53■□□□□ 0.4
SS18-226ENST00000585241 ZSCAN20P17040 1043 aaPredicted RBP17.53■□□□□ 0.4
SS18-226ENST00000585241 GTF2H1P32780 548 aa17.53■□□□□ 0.4
SS18-226ENST00000585241 RAB27AP51159 221 aa17.53■□□□□ 0.4
SS18-226ENST00000585241 WNT7BP56706 349 aa17.53■□□□□ 0.4
SS18-226ENST00000585241 KCNH2Q12809 1159 aa17.53■□□□□ 0.4
SS18-226ENST00000585241 SURF1Q15526 300 aa17.53■□□□□ 0.4
SS18-226ENST00000585241 SEZ6Q53EL9 994 aa17.53■□□□□ 0.4
SS18-226ENST00000585241 DCAF17Q5H9S7 520 aaPredicted RBP17.53■□□□□ 0.4
SS18-226ENST00000585241 TWF2Q6IBS0 349 aaKnown RBP17.53■□□□□ 0.4
SS18-226ENST00000585241 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.53■□□□□ 0.4
SS18-226ENST00000585241 TMEM192Q8IY95 271 aa17.53■□□□□ 0.4
SS18-226ENST00000585241 ERGIC2Q96RQ1 377 aa17.53■□□□□ 0.4
SS18-226ENST00000585241 CCDC94Q9BW85 323 aaPredicted RBP17.53■□□□□ 0.4
SS18-226ENST00000585241 IFIH1Q9BYX4 1025 aaKnown RBP17.53■□□□□ 0.4
SS18-226ENST00000585241 ALPK3Q96L96 1907 aa17.53■□□□□ 0.4
SS18-226ENST00000585241 ANK1P16157 1881 aa17.52■□□□□ 0.4
SS18-226ENST00000585241 TTC26A0AVF1 554 aa17.52■□□□□ 0.4
SS18-226ENST00000585241 GTPBP10A4D1E9 387 aaKnown RBP17.52■□□□□ 0.4
SS18-226ENST00000585241 P4HA2O15460 535 aa17.52■□□□□ 0.4
SS18-226ENST00000585241 STX10O60499 249 aa17.52■□□□□ 0.4
SS18-226ENST00000585241 IL18RAPO95256 599 aa17.52■□□□□ 0.4
SS18-226ENST00000585241 TRIM49P0CI25 452 aa17.52■□□□□ 0.4
SS18-226ENST00000585241 TRIM49CP0CI26 452 aa17.52■□□□□ 0.4
SS18-226ENST00000585241 RFC2P35250 354 aa17.52■□□□□ 0.4
SS18-226ENST00000585241 DLG4P78352 724 aa17.52■□□□□ 0.4
SS18-226ENST00000585241 MRPL10Q7Z7H8 261 aaKnown RBP17.52■□□□□ 0.4
SS18-226ENST00000585241 CD302Q8IX05 232 aa17.52■□□□□ 0.4
SS18-226ENST00000585241 SMG8Q8ND04 991 aaKnown RBP17.52■□□□□ 0.4
SS18-226ENST00000585241 APBB2Q92870 758 aa17.52■□□□□ 0.4
SS18-226ENST00000585241 PDLIM2Q96JY6 352 aa17.52■□□□□ 0.4
SS18-226ENST00000585241 ACAP3Q96P50 834 aa17.52■□□□□ 0.4
SS18-226ENST00000585241 CGRRF1Q99675 332 aa17.52■□□□□ 0.4
SS18-226ENST00000585241 FTHL17Q9BXU8 183 aa17.52■□□□□ 0.4
SS18-226ENST00000585241 NXF3Q9H4D5 531 aaKnown RBP17.52■□□□□ 0.4
SS18-226ENST00000585241 ASB7Q9H672 318 aa17.52■□□□□ 0.4
SS18-226ENST00000585241 RPF1Q9H9Y2 349 aaKnown RBP17.52■□□□□ 0.4
SS18-226ENST00000585241 PLEKHA5Q9HAU0 1116 aa17.52■□□□□ 0.4
SS18-226ENST00000585241 FAM105AQ9NUU6 356 aa17.52■□□□□ 0.4
SS18-226ENST00000585241 IPPQ9Y573 584 aa17.52■□□□□ 0.4
SS18-226ENST00000585241 N4BP1O75113 896 aaKnown RBP17.51■□□□□ 0.39
SS18-226ENST00000585241 CXCL8P10145 99 aa17.51■□□□□ 0.39
SS18-226ENST00000585241 CYP2C18P33260 490 aa17.51■□□□□ 0.39
SS18-226ENST00000585241 FMO5P49326 533 aa17.51■□□□□ 0.39
SS18-226ENST00000585241 PPP3CAQ08209 521 aa17.51■□□□□ 0.39
SS18-226ENST00000585241 SLC10A6Q3KNW5 377 aa17.51■□□□□ 0.39
SS18-226ENST00000585241 XKR4Q5GH76 650 aa17.51■□□□□ 0.39
SS18-226ENST00000585241 FKBP15Q5T1M5 1219 aa17.51■□□□□ 0.39
SS18-226ENST00000585241 COL13A1Q5TAT6 717 aaPredicted RBP17.51■□□□□ 0.39
SS18-226ENST00000585241 TCERG1LQ5VWI1 586 aa17.51■□□□□ 0.39
SS18-226ENST00000585241 C15orf39Q6ZRI6 1047 aa17.51■□□□□ 0.39
SS18-226ENST00000585241 WDR49Q8IV35 697 aa17.51■□□□□ 0.39
SS18-226ENST00000585241 VSTM4Q8IW00 320 aa17.51■□□□□ 0.39
SS18-226ENST00000585241 ABHD8Q96I13 439 aa17.51■□□□□ 0.39
SS18-226ENST00000585241 SNX27Q96L92 541 aa17.51■□□□□ 0.39
SS18-226ENST00000585241 PPP1R12CQ9BZL4 782 aa17.51■□□□□ 0.39
SS18-226ENST00000585241 TRIM6Q9C030 488 aaPredicted RBP17.51■□□□□ 0.39
SS18-226ENST00000585241 PDE11AQ9HCR9 933 aa17.51■□□□□ 0.39
SS18-226ENST00000585241 RGS18Q9NS28 235 aa17.51■□□□□ 0.39
SS18-226ENST00000585241 PCDHB2Q9Y5E7 798 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms