RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 CA14Q9ULX7 337 aa22.71■■□□□ 1.23
SRSF1-206ENST00000583741 FAM205CA6NFA0 338 aa22.7■■□□□ 1.22
SRSF1-206ENST00000583741 INO80B-WBP1J3KQ70 363 aa22.7■■□□□ 1.22
SRSF1-206ENST00000583741 TGM5O43548 720 aa22.7■■□□□ 1.22
SRSF1-206ENST00000583741 XBP1P17861 261 aa22.7■■□□□ 1.22
SRSF1-206ENST00000583741 GUCY1B3Q02153 619 aa22.7■■□□□ 1.22
SRSF1-206ENST00000583741 CAPSQ13938 189 aa22.7■■□□□ 1.22
SRSF1-206ENST00000583741 MXD4Q14582 209 aaPredicted RBP22.7■■□□□ 1.22
SRSF1-206ENST00000583741 PCBP1Q15365 356 aaKnown RBP eCLIP22.7■■□□□ 1.22
SRSF1-206ENST00000583741 ELMSAN1Q6PJG2 1045 aa22.7■■□□□ 1.22
SRSF1-206ENST00000583741 IFNLR1Q8IU57 520 aaPredicted RBP22.7■■□□□ 1.22
SRSF1-206ENST00000583741 GLYCTKQ8IVS8 523 aa22.7■■□□□ 1.22
SRSF1-206ENST00000583741 TPH2Q8IWU9 490 aa22.7■■□□□ 1.22
SRSF1-206ENST00000583741 MARCH6O60337 910 aa22.69■■□□□ 1.22
SRSF1-206ENST00000583741 SLITRK3O94933 977 aa22.69■■□□□ 1.22
SRSF1-206ENST00000583741 F13A1P00488 732 aa22.69■■□□□ 1.22
SRSF1-206ENST00000583741 ARF4P18085 180 aaPredicted RBP22.69■■□□□ 1.22
SRSF1-206ENST00000583741 FUT10Q6P4F1 479 aa22.69■■□□□ 1.22
SRSF1-206ENST00000583741 CDR2LQ86X02 465 aaPredicted RBP22.69■■□□□ 1.22
SRSF1-206ENST00000583741 RABGGTAQ92696 567 aa22.69■■□□□ 1.22
SRSF1-206ENST00000583741 NT5C3AQ9H0P0 336 aa22.69■■□□□ 1.22
SRSF1-206ENST00000583741 STK25O00506 426 aa22.68■■□□□ 1.22
SRSF1-206ENST00000583741 B4GALT5O43286 388 aa22.68■■□□□ 1.22
SRSF1-206ENST00000583741 SRFP11831 508 aa22.68■■□□□ 1.22
SRSF1-206ENST00000583741 RPL17P18621 184 aaKnown RBP22.68■■□□□ 1.22
SRSF1-206ENST00000583741 AKAP5P24588 427 aa22.68■■□□□ 1.22
SRSF1-206ENST00000583741 ST13P5Q8NFI4 369 aaPredicted RBP22.68■■□□□ 1.22
SRSF1-206ENST00000583741 GPR152Q8TDT2 470 aa22.68■■□□□ 1.22
SRSF1-206ENST00000583741 HDAC7Q8WUI4 952 aa22.68■■□□□ 1.22
SRSF1-206ENST00000583741 COLEC11Q9BWP8 271 aa22.68■■□□□ 1.22
SRSF1-206ENST00000583741 PLEKHA4Q9H4M7 779 aa22.68■■□□□ 1.22
SRSF1-206ENST00000583741 TBC1D17Q9HA65 648 aa22.68■■□□□ 1.22
SRSF1-206ENST00000583741 CACNG4Q9UBN1 327 aa22.68■■□□□ 1.22
SRSF1-206ENST00000583741 GIT1Q9Y2X7 761 aa22.68■■□□□ 1.22
SRSF1-206ENST00000583741 NR1I2O75469 434 aa22.67■■□□□ 1.22
SRSF1-206ENST00000583741 TFDP1Q14186 410 aa22.67■■□□□ 1.22
SRSF1-206ENST00000583741 LILRA6Q6PI73 481 aa22.67■■□□□ 1.22
SRSF1-206ENST00000583741 GET4Q7L5D6 327 aaPredicted RBP22.67■■□□□ 1.22
SRSF1-206ENST00000583741 NAP1L4Q99733 375 aaKnown RBP22.67■■□□□ 1.22
SRSF1-206ENST00000583741 TRIM6Q9C030 488 aaPredicted RBP22.67■■□□□ 1.22
SRSF1-206ENST00000583741 PIDD1Q9HB75 910 aa22.67■■□□□ 1.22
SRSF1-206ENST00000583741 ADAM28Q9UKQ2 775 aa22.67■■□□□ 1.22
SRSF1-206ENST00000583741 LAMP2P13473 410 aa22.66■■□□□ 1.22
SRSF1-206ENST00000583741 GLRA2P23416 452 aa22.66■■□□□ 1.22
SRSF1-206ENST00000583741 ARL2P36404 184 aa22.66■■□□□ 1.22
SRSF1-206ENST00000583741 ID4P47928 161 aa22.66■■□□□ 1.22
SRSF1-206ENST00000583741 POU5F1BQ06416 359 aa22.66■■□□□ 1.22
SRSF1-206ENST00000583741 NCBP1Q09161 790 aaKnown RBP22.66■■□□□ 1.22
SRSF1-206ENST00000583741 USP41Q3LFD5 358 aa22.66■■□□□ 1.22
SRSF1-206ENST00000583741 SLFN12Q8IYM2 578 aa22.66■■□□□ 1.22
SRSF1-206ENST00000583741 RIN2Q8WYP3 895 aaPredicted RBP22.66■■□□□ 1.22
SRSF1-206ENST00000583741 EIF2AK1Q9BQI3 630 aaKnown RBP22.66■■□□□ 1.22
SRSF1-206ENST00000583741 PRKD2Q9BZL6 878 aa22.66■■□□□ 1.22
SRSF1-206ENST00000583741 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.66■■□□□ 1.22
SRSF1-206ENST00000583741 ZDHHC7Q9NXF8 308 aa22.66■■□□□ 1.22
SRSF1-206ENST00000583741 KLK14Q9P0G3 267 aa22.66■■□□□ 1.22
SRSF1-206ENST00000583741 FNIP2Q9P278 1114 aa22.66■■□□□ 1.22
SRSF1-206ENST00000583741 OTOGLQ3ZCN5 2332 aa22.66■■□□□ 1.22
SRSF1-206ENST00000583741 FANCMQ8IYD8 2048 aa22.66■■□□□ 1.22
SRSF1-206ENST00000583741 NPTXRO95502 500 aa22.66■■□□□ 1.22
SRSF1-206ENST00000583741 C1RP00736 705 aa22.66■■□□□ 1.22
SRSF1-206ENST00000583741 RFX1P22670 979 aa22.66■■□□□ 1.22
SRSF1-206ENST00000583741 NR5A1Q13285 461 aa22.66■■□□□ 1.22
SRSF1-206ENST00000583741 HTR4Q13639 388 aa22.66■■□□□ 1.22
SRSF1-206ENST00000583741 MCTP1Q6DN14 999 aa22.66■■□□□ 1.22
SRSF1-206ENST00000583741 NXPE3Q969Y0 559 aa22.66■■□□□ 1.22
SRSF1-206ENST00000583741 HSD17B14Q9BPX1 270 aa22.66■■□□□ 1.22
SRSF1-206ENST00000583741 PAAF1Q9BRP4 392 aa22.66■■□□□ 1.22
SRSF1-206ENST00000583741 NFKBIZQ9BYH8 718 aa22.66■■□□□ 1.22
SRSF1-206ENST00000583741 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.66■■□□□ 1.221e-20■□□□□ 10.6
SRSF1-206ENST00000583741 R4GN57 208 aa22.66■■□□□ 1.22
SRSF1-206ENST00000583741 CACNA1IQ9P0X4 2223 aa22.65■■□□□ 1.22
SRSF1-206ENST00000583741 COL4A3Q01955 1670 aa22.65■■□□□ 1.22
SRSF1-206ENST00000583741 ANHXE9PGG2 379 aa22.65■■□□□ 1.22
SRSF1-206ENST00000583741 DGAT1O75907 488 aa22.65■■□□□ 1.22
SRSF1-206ENST00000583741 LYPLA2O95372 231 aa22.65■■□□□ 1.22
SRSF1-206ENST00000583741 GRIK3Q13003 919 aa22.65■■□□□ 1.22
SRSF1-206ENST00000583741 SPECC1Q5M775 1068 aa22.65■■□□□ 1.22
SRSF1-206ENST00000583741 RTP2Q5QGT7 225 aa22.65■■□□□ 1.22
SRSF1-206ENST00000583741 SLC27A1Q6PCB7 646 aa22.65■■□□□ 1.22
SRSF1-206ENST00000583741 PRSS55Q6UWB4 352 aaPredicted RBP22.65■■□□□ 1.22
SRSF1-206ENST00000583741 ERMP1Q7Z2K6 904 aa22.65■■□□□ 1.22
SRSF1-206ENST00000583741 GPR65Q8IYL9 337 aa22.65■■□□□ 1.22
SRSF1-206ENST00000583741 TNFRSF25Q93038 417 aa22.65■■□□□ 1.22
SRSF1-206ENST00000583741 ARHGEF3Q9NR81 526 aa22.65■■□□□ 1.22
SRSF1-206ENST00000583741 DLGAP2Q9P1A6 1054 aa22.65■■□□□ 1.22
SRSF1-206ENST00000583741 NUMBLQ9Y6R0 609 aa22.65■■□□□ 1.22
SRSF1-206ENST00000583741 BAG4O95429 457 aaKnown RBP22.64■■□□□ 1.21
SRSF1-206ENST00000583741 DCNP07585 359 aaKnown RBP22.64■■□□□ 1.21
SRSF1-206ENST00000583741 SAFBQ15424 915 aaKnown RBP eCLIP22.64■■□□□ 1.21
SRSF1-206ENST00000583741 HACE1Q8IYU2 909 aa22.64■■□□□ 1.21
SRSF1-206ENST00000583741 ZSCAN16Q9H4T2 348 aaPredicted RBP22.64■■□□□ 1.21
SRSF1-206ENST00000583741 ATP6V1DQ9Y5K8 247 aa22.64■■□□□ 1.21
SRSF1-206ENST00000583741 CEP250Q9BV73 2442 aa22.64■■□□□ 1.21
SRSF1-206ENST00000583741 VWA8A3KMH1 1905 aa22.63■■□□□ 1.21
SRSF1-206ENST00000583741 TCHHQ07283 1943 aa22.63■■□□□ 1.21
SRSF1-206ENST00000583741 A0A087WWV3 80 aa22.63■■□□□ 1.21
SRSF1-206ENST00000583741 A0A1B0GUA9 196 aa22.63■■□□□ 1.21
SRSF1-206ENST00000583741 ZMYND10O75800 440 aa22.63■■□□□ 1.21
SRSF1-206ENST00000583741 RARRES1P49788 294 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms