RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 AFG1LQ8WV93 481 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 BAP1Q92560 729 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 LENG1Q96BZ8 264 aaPredicted RBP10.06□□□□□ -0.8
SS18-220ENST00000582092 BORCS6Q96GS4 357 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 FAM81BQ96LP2 452 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 TOX2Q96NM4 488 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 ALS2CR12Q96Q35 445 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 MAP7D2Q96T17 732 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 NAPGQ99747 312 aaPredicted RBP10.06□□□□□ -0.8
SS18-220ENST00000582092 FAM213AQ9BRX8 229 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 MSTO1Q9BUK6 570 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 MRPL4Q9BYD3 311 aaKnown RBP10.06□□□□□ -0.8
SS18-220ENST00000582092 STK33Q9BYT3 514 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 KATNBL1Q9H079 304 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 IKZF4Q9H2S9 585 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 AIPL1Q9NZN9 384 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 ARHGAP28Q9P2N2 729 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 DNAJC12Q9UKB3 198 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 GNEQ9Y223 722 aaKnown RBP10.06□□□□□ -0.8
SS18-220ENST00000582092 TELO2Q9Y4R8 837 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 DOCK5Q9H7D0 1870 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 RBM47A0AV96 593 aaKnown RBP10.05□□□□□ -0.8
SS18-220ENST00000582092 EPHB6O15197 1021 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 CLDN3O15551 220 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 PQBP1O60828 265 aaKnown RBP10.05□□□□□ -0.8
SS18-220ENST00000582092 PHACTR2O75167 634 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 NOL4O94818 638 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 LGALS2P05162 132 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 CLTBP09497 229 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 DLATP10515 647 aaKnown RBP10.05□□□□□ -0.8
SS18-220ENST00000582092 RAG1P15918 1043 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 SMPD1P17405 629 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 TNNI1P19237 187 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 TNFAIP3P21580 790 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 ANXA13P27216 316 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 USP8P40818 1118 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 MAGEA10P43363 369 aaPredicted RBP10.05□□□□□ -0.8
SS18-220ENST00000582092 PHKA2P46019 1235 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 GCLMP48507 274 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 CHMP4BP1P59074 171 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 TLE2Q04725 743 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 ENPEPQ07075 957 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 ARHGAP1Q07960 439 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 NCBP1Q09161 790 aaKnown RBP10.05□□□□□ -0.8
SS18-220ENST00000582092 LAMTOR4Q0VGL1 99 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 SURF1Q15526 300 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 TARBP2Q15633 366 aaKnown RBP10.05□□□□□ -0.8
SS18-220ENST00000582092 IFI16Q16666 785 aaKnown RBP10.05□□□□□ -0.8
SS18-220ENST00000582092 ARHGAP44Q17R89 818 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 KRT39Q6A163 491 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 RHPN2Q8IUC4 686 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 RNF149Q8NC42 400 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 ASAP3Q8TDY4 903 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 SECISBP2LQ93073 1101 aaKnown RBP10.05□□□□□ -0.8
SS18-220ENST00000582092 GDF15Q99988 308 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 GANQ9H2C0 597 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 TMEM8AQ9HCN3 771 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 UBE2TQ9NPD8 197 aaPredicted RBP10.05□□□□□ -0.8
SS18-220ENST00000582092 TMEM39AQ9NV64 488 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 SEPT11Q9NVA2 429 aaKnown RBP10.05□□□□□ -0.8
SS18-220ENST00000582092 ARHGAP20Q9P2F6 1191 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 ANKFY1Q9P2R3 1169 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 APEX2Q9UBZ4 518 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 AKT3Q9Y243 479 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 FHOD1Q9Y613 1164 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 KAT6AQ92794 2004 aa10.05□□□□□ -0.8
SS18-220ENST00000582092 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.04□□□□□ -0.8
SS18-220ENST00000582092 TISP43B9A030 160 aa10.04□□□□□ -0.8
SS18-220ENST00000582092 H3BRB1 525 aa10.04□□□□□ -0.8
SS18-220ENST00000582092 INO80B-WBP1J3KQ70 363 aa10.04□□□□□ -0.8
SS18-220ENST00000582092 ARVCFO00192 962 aa10.04□□□□□ -0.8
SS18-220ENST00000582092 GFPT2O94808 682 aa10.04□□□□□ -0.8
SS18-220ENST00000582092 PRKCBP05771 671 aa10.04□□□□□ -0.8
SS18-220ENST00000582092 HARSP12081 509 aaKnown RBP10.04□□□□□ -0.8
SS18-220ENST00000582092 INSRRP14616 1297 aa10.04□□□□□ -0.8
SS18-220ENST00000582092 SOX5P35711 763 aa10.04□□□□□ -0.8
SS18-220ENST00000582092 TUBB4BP68371 445 aa10.04□□□□□ -0.8
SS18-220ENST00000582092 CDC42EP1Q00587 391 aa10.04□□□□□ -0.8
SS18-220ENST00000582092 BEX3Q00994 111 aa10.04□□□□□ -0.8
SS18-220ENST00000582092 CYP27A1Q02318 531 aa10.04□□□□□ -0.8
SS18-220ENST00000582092 CYP24A1Q07973 514 aa10.04□□□□□ -0.8
SS18-220ENST00000582092 BIRC3Q13489 604 aa10.04□□□□□ -0.8
SS18-220ENST00000582092 DRAP1Q14919 205 aaPredicted RBP10.04□□□□□ -0.8
SS18-220ENST00000582092 IQCEQ6IPM2 695 aa10.04□□□□□ -0.8
SS18-220ENST00000582092 CCSAPQ6IQ19 270 aaPredicted RBP10.04□□□□□ -0.8
SS18-220ENST00000582092 ZNF662Q6ZS27 426 aa10.04□□□□□ -0.8
SS18-220ENST00000582092 ANKRD33Q7Z3H0 272 aa10.04□□□□□ -0.8
SS18-220ENST00000582092 APBB1IPQ7Z5R6 666 aaPredicted RBP10.04□□□□□ -0.8
SS18-220ENST00000582092 TRIM50Q86XT4 487 aa10.04□□□□□ -0.8
SS18-220ENST00000582092 CBWD2Q8IUF1 395 aa10.04□□□□□ -0.8
SS18-220ENST00000582092 TDHQ8IZJ6 230 aa10.04□□□□□ -0.8
SS18-220ENST00000582092 SLC35F6Q8N357 371 aa10.04□□□□□ -0.8
SS18-220ENST00000582092 LRRC71Q8N4P6 559 aa10.04□□□□□ -0.8
SS18-220ENST00000582092 EMID1Q96A84 441 aaPredicted RBP10.04□□□□□ -0.8
SS18-220ENST00000582092 MFSD14AQ96MC6 490 aa10.04□□□□□ -0.8
SS18-220ENST00000582092 NLRP4Q96MN2 994 aa10.04□□□□□ -0.8
SS18-220ENST00000582092 NT5C1BQ96P26 610 aa10.04□□□□□ -0.8
SS18-220ENST00000582092 TARS2Q9BW92 718 aaKnown RBP10.04□□□□□ -0.8
SS18-220ENST00000582092 INO80BQ9C086 356 aaPredicted RBP10.04□□□□□ -0.8
SS18-220ENST00000582092 TUT1Q9H6E5 874 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms