RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 COL26A1Q96A83 441 aa15.49■□□□□ 0.07
CSNK1D-219ENST00000581660 ELSPBP1Q96BH3 223 aa15.49■□□□□ 0.07
CSNK1D-219ENST00000581660 CCDC51Q96ER9 411 aa15.49■□□□□ 0.07
CSNK1D-219ENST00000581660 SH2D3AQ9BRG2 576 aa15.49■□□□□ 0.07
CSNK1D-219ENST00000581660 ZMYND12Q9H0C1 365 aa15.49■□□□□ 0.07
CSNK1D-219ENST00000581660 TRPV5Q9NQA5 729 aa15.49■□□□□ 0.07
CSNK1D-219ENST00000581660 AVENQ9NQS1 362 aaPredicted RBP15.49■□□□□ 0.07
CSNK1D-219ENST00000581660 NDRG2Q9UN36 371 aaKnown RBP15.49■□□□□ 0.07
CSNK1D-219ENST00000581660 RBM8AQ9Y5S9 174 aaKnown RBP15.49■□□□□ 0.07
CSNK1D-219ENST00000581660 SDK1Q7Z5N4 2213 aa15.48■□□□□ 0.07
CSNK1D-219ENST00000581660 SF3B1O75533 1304 aaKnown RBP eCLIP15.48■□□□□ 0.076e-7■■■■■ 43.1
CSNK1D-219ENST00000581660 CHMP2AO43633 222 aa15.48■□□□□ 0.07
CSNK1D-219ENST00000581660 IGHDP01880 384 aa15.48■□□□□ 0.07
CSNK1D-219ENST00000581660 GSPT1P15170 499 aaKnown RBP15.48■□□□□ 0.07
CSNK1D-219ENST00000581660 PCBP1Q15365 356 aaKnown RBP eCLIP15.48■□□□□ 0.07
CSNK1D-219ENST00000581660 UVSSAQ2YD98 709 aa15.48■□□□□ 0.07
CSNK1D-219ENST00000581660 AASDHQ4L235 1098 aaPredicted RBP15.48■□□□□ 0.07
CSNK1D-219ENST00000581660 APOA5Q6Q788 366 aa15.48■□□□□ 0.07
CSNK1D-219ENST00000581660 B3GNT9Q6UX72 402 aa15.48■□□□□ 0.07
CSNK1D-219ENST00000581660 ANO5Q75V66 913 aa15.48■□□□□ 0.07
CSNK1D-219ENST00000581660 RTL10Q7L3V2 364 aa15.48■□□□□ 0.07
CSNK1D-219ENST00000581660 LONP2Q86WA8 852 aa15.48■□□□□ 0.07
CSNK1D-219ENST00000581660 SPEM1Q8N4L4 309 aa15.48■□□□□ 0.07
CSNK1D-219ENST00000581660 FAM160A2Q8N612 972 aaPredicted RBP15.48■□□□□ 0.07
CSNK1D-219ENST00000581660 TEKT3Q9BXF9 490 aa15.48■□□□□ 0.07
CSNK1D-219ENST00000581660 TMEM121BQ9BXQ6 578 aaPredicted RBP15.48■□□□□ 0.07
CSNK1D-219ENST00000581660 EIF2AQ9BY44 585 aaKnown RBP15.48■□□□□ 0.07
CSNK1D-219ENST00000581660 RWDD1Q9H446 243 aaPredicted RBP15.48■□□□□ 0.07
CSNK1D-219ENST00000581660 LMAN1LQ9HAT1 526 aa15.48■□□□□ 0.07
CSNK1D-219ENST00000581660 HCFC1R1Q9NWW0 138 aa15.48■□□□□ 0.07
CSNK1D-219ENST00000581660 DNMT3BQ9UBC3 853 aaKnown RBP15.48■□□□□ 0.07
CSNK1D-219ENST00000581660 POLIQ9UNA4 740 aa15.48■□□□□ 0.07
CSNK1D-219ENST00000581660 GIT1Q9Y2X7 761 aa15.48■□□□□ 0.07
CSNK1D-219ENST00000581660 SPAG17Q6Q759 2223 aa15.47■□□□□ 0.07
CSNK1D-219ENST00000581660 TMEM8BA6NDV4 472 aa15.47■□□□□ 0.07
CSNK1D-219ENST00000581660 CHURC1-FNTBB4DL54 471 aa15.47■□□□□ 0.07
CSNK1D-219ENST00000581660 EDIL3O43854 480 aa15.47■□□□□ 0.07
CSNK1D-219ENST00000581660 KCNK5O95279 499 aa15.47■□□□□ 0.07
CSNK1D-219ENST00000581660 FCARP24071 287 aa15.47■□□□□ 0.07
CSNK1D-219ENST00000581660 FNTBP49356 437 aa15.47■□□□□ 0.07
CSNK1D-219ENST00000581660 SRSF5Q13243 272 aaKnown RBP15.47■□□□□ 0.07
CSNK1D-219ENST00000581660 GAS6Q14393 721 aa15.47■□□□□ 0.07
CSNK1D-219ENST00000581660 RTN1Q16799 776 aa15.47■□□□□ 0.07
CSNK1D-219ENST00000581660 PFKFB3Q16875 520 aaPredicted RBP15.47■□□□□ 0.07
CSNK1D-219ENST00000581660 LRCH2Q5VUJ6 765 aa15.47■□□□□ 0.07
CSNK1D-219ENST00000581660 TANGO2Q6ICL3 276 aa15.47■□□□□ 0.07
CSNK1D-219ENST00000581660 POTEHQ6S545 545 aa15.47■□□□□ 0.07
CSNK1D-219ENST00000581660 SYNE3Q6ZMZ3 975 aa15.47■□□□□ 0.07
CSNK1D-219ENST00000581660 LNX1Q8TBB1 728 aaPredicted RBP15.47■□□□□ 0.07
CSNK1D-219ENST00000581660 SLC7A14Q8TBB6 771 aa15.47■□□□□ 0.07
CSNK1D-219ENST00000581660 TTPALQ9BTX7 342 aa15.47■□□□□ 0.07
CSNK1D-219ENST00000581660 LSM14BQ9BX40 385 aaKnown RBP15.47■□□□□ 0.07
CSNK1D-219ENST00000581660 MRPS23Q9Y3D9 190 aaKnown RBP15.47■□□□□ 0.07
CSNK1D-219ENST00000581660 HES2Q9Y543 173 aa15.47■□□□□ 0.07
CSNK1D-219ENST00000581660 ITPR1Q14643 2758 aa15.47■□□□□ 0.07
CSNK1D-219ENST00000581660 K7ESF4 209 aa15.46■□□□□ 0.07
CSNK1D-219ENST00000581660 PSMD10O75832 226 aa15.46■□□□□ 0.07
CSNK1D-219ENST00000581660 ZNF806P0C7X5 589 aa15.46■□□□□ 0.07
CSNK1D-219ENST00000581660 CHRNB1P11230 501 aa15.46■□□□□ 0.07
CSNK1D-219ENST00000581660 AXLP30530 894 aa15.46■□□□□ 0.07
CSNK1D-219ENST00000581660 HOXA6P31267 233 aa15.46■□□□□ 0.07
CSNK1D-219ENST00000581660 GRIK3Q13003 919 aa15.46■□□□□ 0.07
CSNK1D-219ENST00000581660 AAMPQ13685 434 aa15.46■□□□□ 0.07
CSNK1D-219ENST00000581660 PSMD5Q16401 504 aa15.46■□□□□ 0.07
CSNK1D-219ENST00000581660 SLC5A9Q2M3M2 681 aa15.46■□□□□ 0.07
CSNK1D-219ENST00000581660 AXDND1Q5T1B0 1012 aaPredicted RBP15.46■□□□□ 0.07
CSNK1D-219ENST00000581660 STPG1Q5TH74 334 aa15.46■□□□□ 0.07
CSNK1D-219ENST00000581660 MIER3Q7Z3K6 550 aa15.46■□□□□ 0.07
CSNK1D-219ENST00000581660 MAP4K3Q8IVH8 894 aa15.46■□□□□ 0.07
CSNK1D-219ENST00000581660 PRPF31Q8WWY3 499 aaKnown RBP15.46■□□□□ 0.07
CSNK1D-219ENST00000581660 PSPC1Q8WXF1 523 aaKnown RBP15.46■□□□□ 0.07
CSNK1D-219ENST00000581660 ING5Q8WYH8 240 aa15.46■□□□□ 0.07
CSNK1D-219ENST00000581660 FAM3CQ92520 227 aa15.46■□□□□ 0.07
CSNK1D-219ENST00000581660 LOXL4Q96JB6 756 aa15.46■□□□□ 0.07
CSNK1D-219ENST00000581660 LRRC2Q9BYS8 371 aa15.46■□□□□ 0.07
CSNK1D-219ENST00000581660 WASF3Q9UPY6 502 aa15.46■□□□□ 0.07
CSNK1D-219ENST00000581660 SMG1Q96Q15 3661 aaKnown RBP15.46■□□□□ 0.07
CSNK1D-219ENST00000581660 AKAP13Q12802 2813 aa15.46■□□□□ 0.07
CSNK1D-219ENST00000581660 NBEAQ8NFP9 2946 aa15.46■□□□□ 0.06
CSNK1D-219ENST00000581660 DMXL2Q8TDJ6 3036 aa15.46■□□□□ 0.06
CSNK1D-219ENST00000581660 DDX11L8A8MPP1 907 aa15.45■□□□□ 0.06
CSNK1D-219ENST00000581660 ADAM12O43184 909 aa15.45■□□□□ 0.06
CSNK1D-219ENST00000581660 TSPAN1O60635 241 aa15.45■□□□□ 0.06
CSNK1D-219ENST00000581660 TADA2AO75478 443 aa15.45■□□□□ 0.06
CSNK1D-219ENST00000581660 MLLT6P55198 1093 aaPredicted RBP15.45■□□□□ 0.06
CSNK1D-219ENST00000581660 LAMTOR4Q0VGL1 99 aa15.45■□□□□ 0.06
CSNK1D-219ENST00000581660 RAB33AQ14088 237 aa15.45■□□□□ 0.06
CSNK1D-219ENST00000581660 HSP90AA2PQ14568 343 aaPredicted RBP15.45■□□□□ 0.06
CSNK1D-219ENST00000581660 SF3A2Q15428 464 aaKnown RBP15.45■□□□□ 0.06
CSNK1D-219ENST00000581660 TTC22Q5TAA0 569 aa15.45■□□□□ 0.06
CSNK1D-219ENST00000581660 NOTUMQ6P988 496 aa15.45■□□□□ 0.06
CSNK1D-219ENST00000581660 PDXDC1Q6P996 788 aa15.45■□□□□ 0.06
CSNK1D-219ENST00000581660 C12orf50Q8NA57 414 aaPredicted RBP15.45■□□□□ 0.06
CSNK1D-219ENST00000581660 SLC7A3Q8WY07 619 aa15.45■□□□□ 0.06
CSNK1D-219ENST00000581660 IRF7Q92985 503 aa15.45■□□□□ 0.06
CSNK1D-219ENST00000581660 MCRS1Q96EZ8 462 aa15.45■□□□□ 0.06
CSNK1D-219ENST00000581660 DHX33Q9H6R0 707 aaKnown RBP15.45■□□□□ 0.06
CSNK1D-219ENST00000581660 BRD9Q9H8M2 597 aa15.45■□□□□ 0.06
CSNK1D-219ENST00000581660 C6orf50Q9HD87 102 aa15.45■□□□□ 0.06
CSNK1D-219ENST00000581660 RXFP3Q9NSD7 469 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms