RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 FAM86B1E9PN63 330 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 CCL16O15467 120 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 ECI2O75521 394 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 EPN2O95208 641 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 FAM86B2P0C5J1 330 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 CHRNB1P11230 501 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 FCARP24071 287 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 CNR2P34972 360 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 OR1G1P47890 313 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 CXCL12P48061 93 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 RAB27AP51159 221 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 NOVA1P51513 510 aaKnown RBP8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 ANTXR2P58335 489 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 DSC1Q08554 894 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 ZNF252P-AS1Q0IIN9 211 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 PPP2R5DQ14738 602 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 PLA2G2CQ5R387 149 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 C6orf132Q5T0Z8 1188 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 UBXN11Q5T124 520 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 TANGO2Q6ICL3 276 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 C12orf50Q8NA57 414 aaPredicted RBP8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 IGDCC4Q8TDY8 1250 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 ING5Q8WYH8 240 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 DNASE1L2Q92874 299 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 RILPL2Q969X0 211 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 PGBD4Q96DM1 585 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 SCLT1Q96NL6 688 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 CEP89Q96ST8 783 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 MTRQ99707 1265 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 FDXACB1Q9BRP7 624 aaPredicted RBP8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 SCNM1Q9BWG6 230 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 GCOM2Q9BZD3 368 aaPredicted RBP8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 MIOSQ9NXC5 875 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 SEC63Q9UGP8 760 aaKnown RBP8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 VWA8A3KMH1 1905 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 LAMA5O15230 3695 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 F5P12259 2224 aa8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 IPO5O00410 1097 aaKnown RBP8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 PAPSS2O95340 614 aaPredicted RBP8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 OATP04181 439 aa8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 HNRNPA1P09651 372 aaKnown RBP eCLIP8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 SFPQP23246 707 aaKnown RBP eCLIP8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 RAP1GAPP47736 663 aa8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 TARBP2Q15633 366 aaKnown RBP8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 UGCGQ16739 394 aa8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 SLC5A9Q2M3M2 681 aa8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 ANKRD45Q5TZF3 282 aa8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 HEATR6Q6AI08 1181 aaKnown RBP8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 ZNF746Q6NUN9 644 aaPredicted RBP8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 PRSS55Q6UWB4 352 aaPredicted RBP8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 NIPA1Q7RTP0 329 aa8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 CATIPQ7Z7H3 387 aa8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 GPR65Q8IYL9 337 aa8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 ZNF654Q8IZM8 581 aa8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 FAM3CQ92520 227 aa8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 MCRS1Q96EZ8 462 aa8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 MAP3K14Q99558 947 aa8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 ANO3Q9BYT9 981 aa8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 RYDENQ9NUL5 291 aaKnown RBP8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 AGPAT5Q9NUQ2 364 aa8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 KANSL3Q9P2N6 904 aa8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 DNMT3BQ9UBC3 853 aaKnown RBP8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 PCDHA10Q9Y5I2 948 aa8.65□□□□□ -1.02
SMARCE1-217ENST00000580654 SDK1Q7Z5N4 2213 aa8.65□□□□□ -1.03
SMARCE1-217ENST00000580654 CNTNAP2Q9UHC6 1331 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 IGKV6-21A0A0C4DH24 114 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 MAN2B1O00754 1011 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 ADAM12O43184 909 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 CAPNS1P04632 268 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 C8AP07357 584 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 PSAPP07602 524 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 HOXA9P31269 272 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 SREBF1P36956 1147 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 RBM25P49756 843 aaKnown RBP8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 PRKCEQ02156 737 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 GRM2Q14416 872 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 RTP2Q5QGT7 225 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 PPM1LQ5SGD2 360 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 TCEAL6Q6IPX3 200 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 FUT10Q6P4F1 479 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 CATSPER4Q7RTX7 472 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 PLA2G4DQ86XP0 818 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 MAP4K3Q8IVH8 894 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 KSR1Q8IVT5 923 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 SMAP1Q8IYB5 467 aaPredicted RBP8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 SPEM1Q8N4L4 309 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 SMG8Q8ND04 991 aaKnown RBP8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 CTCFLQ8NI51 663 aaPredicted RBP8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 CRYGNQ8WXF5 182 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 TCEAL3Q969E4 200 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 ELSPBP1Q96BH3 223 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 FAM167AQ96KS9 214 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 BBC3Q96PG8 261 aaPredicted RBP8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 CLSTN3Q9BQT9 956 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 RBM12Q9NTZ6 932 aaKnown RBP8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 ANKFY1Q9P2R3 1169 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 KCNH3Q9ULD8 1083 aa8.64□□□□□ -1.03
SMARCE1-217ENST00000580654 NCANO14594 1321 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 ERICH2A1L162 156 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms