RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 SH2D3AQ9BRG2 576 aa12.44□□□□□ -0.42
SMARCE1-214ENST00000578112 POLR3CQ9BUI4 534 aaPredicted RBP12.44□□□□□ -0.42
SMARCE1-214ENST00000578112 DDX23Q9BUQ8 820 aaKnown RBP12.44□□□□□ -0.42
SMARCE1-214ENST00000578112 SMOC2Q9H3U7 446 aa12.44□□□□□ -0.42
SMARCE1-214ENST00000578112 TBC1D17Q9HA65 648 aa12.44□□□□□ -0.42
SMARCE1-214ENST00000578112 CDH7Q9ULB5 785 aa12.44□□□□□ -0.42
SMARCE1-214ENST00000578112 MYO10Q9HD67 2058 aa12.44□□□□□ -0.42
SMARCE1-214ENST00000578112 FANCMQ8IYD8 2048 aa12.44□□□□□ -0.42
SMARCE1-214ENST00000578112 TADA2AO75478 443 aa12.44□□□□□ -0.42
SMARCE1-214ENST00000578112 CTTNQ14247 550 aaKnown RBP12.44□□□□□ -0.42
SMARCE1-214ENST00000578112 LIN9Q5TKA1 542 aa12.44□□□□□ -0.42
SMARCE1-214ENST00000578112 KANK3Q6NY19 840 aa12.44□□□□□ -0.42
SMARCE1-214ENST00000578112 GSTCDQ8NEC7 633 aa12.44□□□□□ -0.42
SMARCE1-214ENST00000578112 NELL2Q99435 816 aa12.44□□□□□ -0.42
SMARCE1-214ENST00000578112 TTPALQ9BTX7 342 aa12.44□□□□□ -0.42
SMARCE1-214ENST00000578112 RGL1Q9NZL6 768 aa12.44□□□□□ -0.42
SMARCE1-214ENST00000578112 DLGAP2Q9P1A6 1054 aa12.44□□□□□ -0.42
SMARCE1-214ENST00000578112 SPTLC1O15269 473 aa12.43□□□□□ -0.42
SMARCE1-214ENST00000578112 N4BP1O75113 896 aaKnown RBP12.43□□□□□ -0.42
SMARCE1-214ENST00000578112 MICAL2O94851 1124 aa12.43□□□□□ -0.42
SMARCE1-214ENST00000578112 DCLRE1AQ6PJP8 1040 aa12.43□□□□□ -0.42
SMARCE1-214ENST00000578112 TAS1R1Q7RTX1 841 aa12.43□□□□□ -0.42
SMARCE1-214ENST00000578112 ERMNQ8TAM6 284 aa12.43□□□□□ -0.42
SMARCE1-214ENST00000578112 RIN2Q8WYP3 895 aaPredicted RBP12.43□□□□□ -0.42
SMARCE1-214ENST00000578112 AIFM3Q96NN9 605 aa12.43□□□□□ -0.42
SMARCE1-214ENST00000578112 MTMR9Q96QG7 549 aa12.43□□□□□ -0.42
SMARCE1-214ENST00000578112 NACC1Q96RE7 527 aa12.43□□□□□ -0.42
SMARCE1-214ENST00000578112 ADPGKQ9BRR6 497 aa12.43□□□□□ -0.42
SMARCE1-214ENST00000578112 POLR3FQ9H1D9 316 aaPredicted RBP12.43□□□□□ -0.42
SMARCE1-214ENST00000578112 MIOSQ9NXC5 875 aa12.43□□□□□ -0.42
SMARCE1-214ENST00000578112 ORC3Q9UBD5 711 aaPredicted RBP12.43□□□□□ -0.42
SMARCE1-214ENST00000578112 BACE2Q9Y5Z0 518 aa12.43□□□□□ -0.42
SMARCE1-214ENST00000578112 KRBA1A5PL33 1030 aa12.43□□□□□ -0.42
SMARCE1-214ENST00000578112 NEMFO60524 1076 aa12.43□□□□□ -0.42
SMARCE1-214ENST00000578112 NPTXRO95502 500 aa12.43□□□□□ -0.42
SMARCE1-214ENST00000578112 RAB33AQ14088 237 aa12.43□□□□□ -0.42
SMARCE1-214ENST00000578112 TMEM132AQ24JP5 1023 aa12.43□□□□□ -0.42
SMARCE1-214ENST00000578112 LONRF3Q496Y0 759 aa12.43□□□□□ -0.42
SMARCE1-214ENST00000578112 RNF39Q9H2S5 420 aa12.43□□□□□ -0.42
SMARCE1-214ENST00000578112 SIT1Q9Y3P8 196 aa12.43□□□□□ -0.42
SMARCE1-214ENST00000578112 NAMPTP43490 491 aa12.42□□□□□ -0.42
SMARCE1-214ENST00000578112 AFF1P51825 1210 aaKnown RBP12.42□□□□□ -0.42
SMARCE1-214ENST00000578112 EFNA5P52803 228 aa12.42□□□□□ -0.42
SMARCE1-214ENST00000578112 PPM1LQ5SGD2 360 aa12.42□□□□□ -0.42
SMARCE1-214ENST00000578112 CPB2Q96IY4 423 aa12.42□□□□□ -0.42
SMARCE1-214ENST00000578112 GPR62Q9BZJ7 368 aa12.42□□□□□ -0.42
SMARCE1-214ENST00000578112 NXF3Q9H4D5 531 aaKnown RBP12.42□□□□□ -0.42
SMARCE1-214ENST00000578112 PATJQ8NI35 1801 aa12.42□□□□□ -0.42
SMARCE1-214ENST00000578112 C2CD2LO14523 706 aa12.42□□□□□ -0.42
SMARCE1-214ENST00000578112 PI15O43692 258 aa12.42□□□□□ -0.42
SMARCE1-214ENST00000578112 THP07101 528 aa12.42□□□□□ -0.42
SMARCE1-214ENST00000578112 CFHP08603 1231 aa12.42□□□□□ -0.42
SMARCE1-214ENST00000578112 TRIM29Q14134 588 aa12.42□□□□□ -0.42
SMARCE1-214ENST00000578112 PSMD5Q16401 504 aa12.42□□□□□ -0.42
SMARCE1-214ENST00000578112 PJA1Q8NG27 643 aa12.42□□□□□ -0.42
SMARCE1-214ENST00000578112 TTC12Q9H892 705 aaPredicted RBP12.42□□□□□ -0.42
SMARCE1-214ENST00000578112 PARP2Q9UGN5 583 aa12.42□□□□□ -0.42
SMARCE1-214ENST00000578112 KCNG1Q9UIX4 513 aa12.42□□□□□ -0.42
SMARCE1-214ENST00000578112 ACKR2O00590 384 aa12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 TRAPPC3O43617 180 aa12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 NARSO43776 548 aaKnown RBP12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 ECI2O75521 394 aa12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 CYP4A11Q02928 519 aa12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 STK3Q13188 491 aa12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 MAPK6Q16659 721 aa12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 C1orf210Q8IVY1 113 aa12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 KCTD17Q8N5Z5 321 aa12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 LNX1Q8TBB1 728 aaPredicted RBP12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 OXER1Q8TDS5 423 aa12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 DNASE1L2Q92874 299 aa12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 DDX27Q96GQ7 796 aaKnown RBP12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 ZFP42Q96MM3 310 aa12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 FAM126AQ9BYI3 521 aaPredicted RBP12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 CCDC113Q9H0I3 377 aa12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 MTRRQ9UBK8 725 aa12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 NCAM2O15394 837 aa12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 SP9P0CG40 484 aa12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 FGFR3P22607 806 aa12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 MAMSTRQ6ZN01 415 aa12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 GET4Q7L5D6 327 aaPredicted RBP12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 GPR152Q8TDT2 470 aa12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 OXCT2Q9BYC2 517 aaPredicted RBP12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 BCO2Q9BYV7 579 aa12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 PDZD7Q9H5P4 517 aa12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 GDE1Q9NZC3 331 aa12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 NUMBLQ9Y6R0 609 aa12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 DOCK8Q8NF50 2099 aa12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 MIA3Q5JRA6 1907 aa12.41□□□□□ -0.42
SMARCE1-214ENST00000578112 RFPL2O75678 378 aa12.4□□□□□ -0.42
SMARCE1-214ENST00000578112 CTDNEP1O95476 244 aa12.4□□□□□ -0.42
SMARCE1-214ENST00000578112 CYP11B2P19099 503 aa12.4□□□□□ -0.42
SMARCE1-214ENST00000578112 RPS9P46781 194 aaKnown RBP12.4□□□□□ -0.42
SMARCE1-214ENST00000578112 PRPF4BQ13523 1007 aaKnown RBP12.4□□□□□ -0.42
SMARCE1-214ENST00000578112 PUM1Q14671 1186 aaKnown RBP eCLIP12.4□□□□□ -0.42
SMARCE1-214ENST00000578112 MLF2Q15773 248 aaPredicted RBP12.4□□□□□ -0.42
SMARCE1-214ENST00000578112 HAUS3Q68CZ6 603 aa12.4□□□□□ -0.42
SMARCE1-214ENST00000578112 ANKS3Q6ZW76 656 aa12.4□□□□□ -0.42
SMARCE1-214ENST00000578112 KIFAP3Q92845 792 aa12.4□□□□□ -0.42
SMARCE1-214ENST00000578112 GTF3C6Q969F1 213 aa12.4□□□□□ -0.42
SMARCE1-214ENST00000578112 MSANTD3Q96H12 275 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms