RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 DHX38Q92620 1227 aaKnown RBP14.86□□□□□ -0.03
CCDC40-209ENST00000573474 FNBP1Q96RU3 617 aa14.86□□□□□ -0.03
CCDC40-209ENST00000573474 CRACR2AQ9BSW2 395 aa14.86□□□□□ -0.03
CCDC40-209ENST00000573474 EDEM3Q9BZQ6 932 aa14.86□□□□□ -0.03
CCDC40-209ENST00000573474 SENP6Q9GZR1 1112 aaPredicted RBP14.86□□□□□ -0.03
CCDC40-209ENST00000573474 TRPV6Q9H1D0 765 aa14.86□□□□□ -0.03
CCDC40-209ENST00000573474 CPSF3Q9UKF6 684 aaKnown RBP14.86□□□□□ -0.03
CCDC40-209ENST00000573474 CAPN11Q9UMQ6 739 aa14.86□□□□□ -0.03
CCDC40-209ENST00000573474 A0A1W2PQJ5 194 aa14.85□□□□□ -0.03
CCDC40-209ENST00000573474 B4GALT4O60513 344 aa14.85□□□□□ -0.03
CCDC40-209ENST00000573474 CLTAP09496 248 aa14.85□□□□□ -0.03
CCDC40-209ENST00000573474 CTSHP09668 335 aa14.85□□□□□ -0.03
CCDC40-209ENST00000573474 CASP14P31944 242 aa14.85□□□□□ -0.03
CCDC40-209ENST00000573474 GCLMP48507 274 aa14.85□□□□□ -0.03
CCDC40-209ENST00000573474 CLDN10P78369 228 aa14.85□□□□□ -0.03
CCDC40-209ENST00000573474 ARID5BQ14865 1188 aa14.85□□□□□ -0.03
CCDC40-209ENST00000573474 CBWD6Q4V339 395 aa14.85□□□□□ -0.03
CCDC40-209ENST00000573474 SEZ6Q53EL9 994 aa14.85□□□□□ -0.03
CCDC40-209ENST00000573474 CBWD3Q5JTY5 395 aa14.85□□□□□ -0.03
CCDC40-209ENST00000573474 CBWD5Q5RIA9 395 aa14.85□□□□□ -0.03
CCDC40-209ENST00000573474 SLC27A1Q6PCB7 646 aa14.85□□□□□ -0.03
CCDC40-209ENST00000573474 CNGA4Q8IV77 575 aa14.85□□□□□ -0.03
CCDC40-209ENST00000573474 THNSL1Q8IYQ7 743 aa14.85□□□□□ -0.03
CCDC40-209ENST00000573474 U2AF1L4Q8WU68 220 aaKnown RBP14.85□□□□□ -0.03
CCDC40-209ENST00000573474 CACTINQ8WUQ7 758 aaKnown RBP14.85□□□□□ -0.03
CCDC40-209ENST00000573474 CCDC51Q96ER9 411 aa14.85□□□□□ -0.03
CCDC40-209ENST00000573474 LSM14BQ9BX40 385 aaKnown RBP14.85□□□□□ -0.03
CCDC40-209ENST00000573474 TMEM8AQ9HCN3 771 aa14.85□□□□□ -0.03
CCDC40-209ENST00000573474 PLCB1Q9NQ66 1216 aa14.85□□□□□ -0.03
CCDC40-209ENST00000573474 FAM207AQ9NSI2 230 aaPredicted RBP14.85□□□□□ -0.03
CCDC40-209ENST00000573474 AGPAT5Q9NUQ2 364 aa14.85□□□□□ -0.03
CCDC40-209ENST00000573474 LUC7L2Q9Y383 392 aaKnown RBP14.85□□□□□ -0.03
CCDC40-209ENST00000573474 NOC2LQ9Y3T9 749 aaKnown RBP14.85□□□□□ -0.03
CCDC40-209ENST00000573474 TTC26A0AVF1 554 aa14.84□□□□□ -0.03
CCDC40-209ENST00000573474 TULP1O00294 542 aaPredicted RBP14.84□□□□□ -0.03
CCDC40-209ENST00000573474 MFAP3LO75121 409 aa14.84□□□□□ -0.03
CCDC40-209ENST00000573474 RPS6KA5O75582 802 aa14.84□□□□□ -0.03
CCDC40-209ENST00000573474 IL18RAPO95256 599 aa14.84□□□□□ -0.03
CCDC40-209ENST00000573474 STAG3L1P0CL83 205 aa14.84□□□□□ -0.03
CCDC40-209ENST00000573474 DLATP10515 647 aaKnown RBP14.84□□□□□ -0.03
CCDC40-209ENST00000573474 SLC9A1P19634 815 aa14.84□□□□□ -0.03
CCDC40-209ENST00000573474 PON1P27169 355 aa14.84□□□□□ -0.03
CCDC40-209ENST00000573474 TNFSF9P41273 254 aa14.84□□□□□ -0.03
CCDC40-209ENST00000573474 MXI1P50539 228 aa14.84□□□□□ -0.03
CCDC40-209ENST00000573474 FXR1P51114 621 aaKnown RBP eCLIP14.84□□□□□ -0.03
CCDC40-209ENST00000573474 ADKP55263 362 aaKnown RBP14.84□□□□□ -0.03
CCDC40-209ENST00000573474 KRT39Q6A163 491 aa14.84□□□□□ -0.03
CCDC40-209ENST00000573474 FAM228AQ86W67 206 aa14.84□□□□□ -0.03
CCDC40-209ENST00000573474 TC2NQ8N9U0 490 aa14.84□□□□□ -0.03
CCDC40-209ENST00000573474 EHBP1Q8NDI1 1231 aa14.84□□□□□ -0.03
CCDC40-209ENST00000573474 ZNF397Q8NF99 534 aaPredicted RBP14.84□□□□□ -0.03
CCDC40-209ENST00000573474 ZNF830Q96NB3 372 aaPredicted RBP14.84□□□□□ -0.03
CCDC40-209ENST00000573474 PANX2Q96RD6 677 aa14.84□□□□□ -0.03
CCDC40-209ENST00000573474 POP1Q99575 1024 aaKnown RBP14.84□□□□□ -0.03
CCDC40-209ENST00000573474 CGRRF1Q99675 332 aa14.84□□□□□ -0.03
CCDC40-209ENST00000573474 TTYH3Q9C0H2 523 aa14.84□□□□□ -0.03
CCDC40-209ENST00000573474 TMEM117Q9H0C3 514 aa14.84□□□□□ -0.03
CCDC40-209ENST00000573474 RPF1Q9H9Y2 349 aaKnown RBP14.84□□□□□ -0.03
CCDC40-209ENST00000573474 PDE11AQ9HCR9 933 aa14.84□□□□□ -0.03
CCDC40-209ENST00000573474 GCNT4Q9P109 453 aa14.84□□□□□ -0.03
CCDC40-209ENST00000573474 PIN4Q9Y237 131 aaKnown RBP14.84□□□□□ -0.03
CCDC40-209ENST00000573474 CEP350Q5VT06 3117 aa14.84□□□□□ -0.03
CCDC40-209ENST00000573474 GPR182O15218 404 aa14.83□□□□□ -0.04
CCDC40-209ENST00000573474 NRDCO43847 1150 aa14.83□□□□□ -0.04
CCDC40-209ENST00000573474 NOL4O94818 638 aa14.83□□□□□ -0.04
CCDC40-209ENST00000573474 NPTXRO95502 500 aa14.83□□□□□ -0.04
CCDC40-209ENST00000573474 CAPN2P17655 700 aa14.83□□□□□ -0.04
CCDC40-209ENST00000573474 TNNI1P19237 187 aa14.83□□□□□ -0.04
CCDC40-209ENST00000573474 GRM5P41594 1212 aa14.83□□□□□ -0.04
CCDC40-209ENST00000573474 AP3M2P53677 418 aa14.83□□□□□ -0.04
CCDC40-209ENST00000573474 OSTNP61366 133 aa14.83□□□□□ -0.04
CCDC40-209ENST00000573474 ZBED6P86452 979 aa14.83□□□□□ -0.04
CCDC40-209ENST00000573474 GOLGA8FQ08AF8 430 aa14.83□□□□□ -0.04
CCDC40-209ENST00000573474 GOLGA8DPQ0D2H9 430 aa14.83□□□□□ -0.04
CCDC40-209ENST00000573474 ENOX2Q16206 610 aaKnown RBP14.83□□□□□ -0.04
CCDC40-209ENST00000573474 INTS2Q9H0H0 1204 aaKnown RBP14.83□□□□□ -0.04
CCDC40-209ENST00000573474 CHST12Q9NRB3 414 aa14.83□□□□□ -0.04
CCDC40-209ENST00000573474 ST3GAL5Q9UNP4 418 aa14.83□□□□□ -0.04
CCDC40-209ENST00000573474 SQORQ9Y6N5 450 aa14.83□□□□□ -0.04
CCDC40-209ENST00000573474 RNF225M0QZC1 329 aaPredicted RBP14.82□□□□□ -0.04
CCDC40-209ENST00000573474 CKBP12277 381 aa14.82□□□□□ -0.04
CCDC40-209ENST00000573474 KRT9P35527 623 aa14.82□□□□□ -0.04
CCDC40-209ENST00000573474 GJA8P48165 433 aa14.82□□□□□ -0.04
CCDC40-209ENST00000573474 MNX1P50219 401 aaPredicted RBP14.82□□□□□ -0.04
CCDC40-209ENST00000573474 WNT7BP56706 349 aa14.82□□□□□ -0.04
CCDC40-209ENST00000573474 TSR1Q2NL82 804 aaKnown RBP14.82□□□□□ -0.04
CCDC40-209ENST00000573474 EPC2Q52LR7 807 aa14.82□□□□□ -0.04
CCDC40-209ENST00000573474 FBXO47Q5MNV8 452 aa14.82□□□□□ -0.04
CCDC40-209ENST00000573474 ZNF618Q5T7W0 954 aa14.82□□□□□ -0.04
CCDC40-209ENST00000573474 KLHDC7AQ5VTJ3 777 aa14.82□□□□□ -0.04
CCDC40-209ENST00000573474 DPY19L2P1Q6NXN4 242 aa14.82□□□□□ -0.04
CCDC40-209ENST00000573474 SV2AQ7L0J3 742 aa14.82□□□□□ -0.04
CCDC40-209ENST00000573474 WDR49Q8IV35 697 aa14.82□□□□□ -0.04
CCDC40-209ENST00000573474 FAM126BQ8IXS8 530 aa14.82□□□□□ -0.04
CCDC40-209ENST00000573474 CEP120Q8N960 986 aa14.82□□□□□ -0.04
CCDC40-209ENST00000573474 ANKLE1Q8NAG6 615 aa14.82□□□□□ -0.04
CCDC40-209ENST00000573474 USP38Q8NB14 1042 aa14.82□□□□□ -0.04
CCDC40-209ENST00000573474 CCDC112Q8NEF3 446 aa14.82□□□□□ -0.04
CCDC40-209ENST00000573474 OR8K1Q8NGG5 319 aa14.82□□□□□ -0.04
CCDC40-209ENST00000573474 CAGE1Q8TC20 777 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms