RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 FAM167AQ96KS9 214 aa10.36□□□□□ -0.75
NPLOC4-210ENST00000572824 NLRP4Q96MN2 994 aa10.36□□□□□ -0.75
NPLOC4-210ENST00000572824 RIT2Q99578 217 aa10.36□□□□□ -0.75
NPLOC4-210ENST00000572824 TCF25Q9BQ70 676 aa10.36□□□□□ -0.75
NPLOC4-210ENST00000572824 PHF20Q9BVI0 1012 aa10.36□□□□□ -0.75
NPLOC4-210ENST00000572824 TMEM117Q9H0C3 514 aa10.36□□□□□ -0.75
NPLOC4-210ENST00000572824 TLE6Q9H808 572 aa10.36□□□□□ -0.75
NPLOC4-210ENST00000572824 C1orf112Q9NSG2 853 aa10.36□□□□□ -0.75
NPLOC4-210ENST00000572824 ZDHHC3Q9NYG2 299 aa10.36□□□□□ -0.75
NPLOC4-210ENST00000572824 RGL1Q9NZL6 768 aa10.36□□□□□ -0.75
NPLOC4-210ENST00000572824 DDX25Q9UHL0 483 aaKnown RBP10.36□□□□□ -0.75
NPLOC4-210ENST00000572824 MYO15AQ9UKN7 3530 aa10.36□□□□□ -0.75
NPLOC4-210ENST00000572824 TRIP11Q15643 1979 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 CACNA1HO95180 2353 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 CYP3A7-CYP3A51PA0A087WV96 503 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 IGKV6-21A0A0C4DH24 114 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 A0A1B0GTH6 734 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 PRR33A8MZF0 331 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 F8W810 466 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 CPLX1O14810 134 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 JAK2O60674 1132 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 EYA4O95677 639 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 PDGFBP01127 241 aaPredicted RBP10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 RPLP2P05387 115 aaKnown RBP10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 CYP3A7P24462 503 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 USP11P51784 963 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 JAK3P52333 1124 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 CYP4A11Q02928 519 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 PTSQ03393 145 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 SPIRE1Q08AE8 756 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 COASYQ13057 564 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 NAA30Q147X3 362 aaPredicted RBP10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 NONOQ15233 471 aaKnown RBP eCLIP10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 PIK3AP1Q6ZUJ8 805 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 RHPN2Q8IUC4 686 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 TEX2Q8IWB9 1127 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 SLC39A11Q8N1S5 342 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 C12orf76Q8N812 135 aaPredicted RBP10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 TMEM143Q96AN5 459 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 PHACTR1Q9C0D0 580 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 KCNMB3Q9NPA1 279 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 ENTPD7Q9NQZ7 604 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 SH3GLB2Q9NR46 395 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 DNAJB4Q9UDY4 337 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 INPP5FQ9Y2H2 1132 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 DYRK1BQ9Y463 629 aa10.35□□□□□ -0.75
NPLOC4-210ENST00000572824 LOC730098B7Z3J9 87 aa10.34□□□□□ -0.75
NPLOC4-210ENST00000572824 MAGEB2O15479 319 aa10.34□□□□□ -0.75
NPLOC4-210ENST00000572824 ZC3H11AO75152 810 aaKnown RBP eCLIP10.34□□□□□ -0.75
NPLOC4-210ENST00000572824 TECP42680 631 aa10.34□□□□□ -0.75
NPLOC4-210ENST00000572824 CTTNQ14247 550 aaKnown RBP10.34□□□□□ -0.75
NPLOC4-210ENST00000572824 ME3Q16798 604 aa10.34□□□□□ -0.75
NPLOC4-210ENST00000572824 ZNF280BQ86YH2 543 aa10.34□□□□□ -0.75
NPLOC4-210ENST00000572824 TRIM22Q8IYM9 498 aa10.34□□□□□ -0.75
NPLOC4-210ENST00000572824 LRRC43Q8N309 656 aa10.34□□□□□ -0.75
NPLOC4-210ENST00000572824 SUSD6Q92537 303 aa10.34□□□□□ -0.75
NPLOC4-210ENST00000572824 MRPS27Q92552 414 aaKnown RBP10.34□□□□□ -0.75
NPLOC4-210ENST00000572824 TNFRSF25Q93038 417 aa10.34□□□□□ -0.75
NPLOC4-210ENST00000572824 ZNF274Q96GC6 653 aaPredicted RBP10.34□□□□□ -0.75
NPLOC4-210ENST00000572824 GBP3Q9H0R5 595 aa10.34□□□□□ -0.75
NPLOC4-210ENST00000572824 S1PR5Q9H228 398 aa10.34□□□□□ -0.75
NPLOC4-210ENST00000572824 ELAC1Q9H777 363 aaKnown RBP10.34□□□□□ -0.75
NPLOC4-210ENST00000572824 IFT122Q9HBG6 1241 aa10.34□□□□□ -0.75
NPLOC4-210ENST00000572824 XPNPEP1Q9NQW7 623 aa10.34□□□□□ -0.75
NPLOC4-210ENST00000572824 SUCLA2Q9P2R7 463 aaPredicted RBP10.34□□□□□ -0.75
NPLOC4-210ENST00000572824 PRKAG3Q9UGI9 489 aa10.34□□□□□ -0.75
NPLOC4-210ENST00000572824 CEP131Q9UPN4 1083 aa10.34□□□□□ -0.75
NPLOC4-210ENST00000572824 PIN4Q9Y237 131 aaKnown RBP10.34□□□□□ -0.75
NPLOC4-210ENST00000572824 PCDHB12Q9Y5F1 795 aa10.34□□□□□ -0.75
NPLOC4-210ENST00000572824 COL4A3Q01955 1670 aa10.34□□□□□ -0.75
NPLOC4-210ENST00000572824 DOCK8Q8NF50 2099 aa10.34□□□□□ -0.75
NPLOC4-210ENST00000572824 USP34Q70CQ2 3546 aa10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 SLC35F4A4IF30 521 aa10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 C2orf71A6NGG8 1288 aa10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 PFKFB2O60825 505 aa10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 MAFO75444 373 aaPredicted RBP10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 MYBP10242 640 aa10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 LAG3P18627 525 aa10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 MSX1P28360 303 aa10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 SFNP31947 248 aa10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 CA8P35219 290 aa10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 BCAR1P56945 870 aa10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 NAALADL2Q58DX5 795 aa10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 XKR3Q5GH77 459 aa10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 UBXN11Q5T124 520 aa10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 NCAPH2Q6IBW4 605 aa10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 ANKRD54Q6NXT1 300 aa10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 CDR2LQ86X02 465 aaPredicted RBP10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 TNPO1Q92973 898 aaKnown RBP10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 MYO19Q96H55 970 aa10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 DYDC2Q96IM9 177 aa10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 FBXL18Q96ME1 805 aa10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 ZNF558Q96NG5 402 aa10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 LXNQ9BS40 222 aa10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 TM6SF1Q9BZW5 370 aa10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 SAP130Q9H0E3 1048 aa10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 NRDE2Q9H7Z3 1164 aa10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 NRBP2Q9NSY0 501 aa10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 TBC1D13Q9NVG8 400 aa10.33□□□□□ -0.76
NPLOC4-210ENST00000572824 CACNG4Q9UBN1 327 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms