RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 IPO5O00410 1097 aaKnown RBP18.71■□□□□ 0.59
SCARF1-205ENST00000571272 GH1P01241 217 aa18.71■□□□□ 0.59
SCARF1-205ENST00000571272 SCP2P22307 547 aa18.71■□□□□ 0.59
SCARF1-205ENST00000571272 KYNUQ16719 465 aa18.71■□□□□ 0.59
SCARF1-205ENST00000571272 FAM71AQ8IYT1 594 aa18.71■□□□□ 0.59
SCARF1-205ENST00000571272 KIF2BQ8N4N8 673 aa18.71■□□□□ 0.59
SCARF1-205ENST00000571272 CCDC127Q96BQ5 260 aa18.71■□□□□ 0.59
SCARF1-205ENST00000571272 CHST7Q9NS84 486 aa18.71■□□□□ 0.59
SCARF1-205ENST00000571272 TBK1Q9UHD2 729 aa18.71■□□□□ 0.59
SCARF1-205ENST00000571272 GZMAP12544 262 aa18.7■□□□□ 0.58
SCARF1-205ENST00000571272 TCEAL1Q15170 157 aa18.7■□□□□ 0.58
SCARF1-205ENST00000571272 VSTM1Q6UX27 236 aa18.7■□□□□ 0.58
SCARF1-205ENST00000571272 XXYLT1Q8NBI6 393 aa18.7■□□□□ 0.58
SCARF1-205ENST00000571272 ACER1Q8TDN7 264 aa18.7■□□□□ 0.58
SCARF1-205ENST00000571272 TEKT3Q9BXF9 490 aa18.7■□□□□ 0.58
SCARF1-205ENST00000571272 IDI2Q9BXS1 227 aa18.7■□□□□ 0.58
SCARF1-205ENST00000571272 WDR11Q9BZH6 1224 aa18.7■□□□□ 0.58
SCARF1-205ENST00000571272 TDRD3Q9H7E2 651 aaKnown RBP18.7■□□□□ 0.58
SCARF1-205ENST00000571272 ECT2Q9H8V3 914 aa18.7■□□□□ 0.58
SCARF1-205ENST00000571272 KCND2Q9NZV8 630 aa18.7■□□□□ 0.58
SCARF1-205ENST00000571272 LARSQ9P2J5 1176 aaKnown RBP18.7■□□□□ 0.58
SCARF1-205ENST00000571272 SUFUQ9UMX1 484 aa18.7■□□□□ 0.58
SCARF1-205ENST00000571272 GBP2P32456 591 aaPredicted RBP18.7■□□□□ 0.58
SCARF1-205ENST00000571272 NCALDP61601 193 aa18.7■□□□□ 0.58
SCARF1-205ENST00000571272 SEPT14Q6ZU15 432 aa18.7■□□□□ 0.58
SCARF1-205ENST00000571272 TRMT10CQ7L0Y3 403 aaKnown RBP18.7■□□□□ 0.58
SCARF1-205ENST00000571272 SEMA4DQ92854 862 aa18.7■□□□□ 0.58
SCARF1-205ENST00000571272 ROPN1BQ9BZX4 212 aaPredicted RBP18.7■□□□□ 0.58
SCARF1-205ENST00000571272 ROPN1Q9HAT0 212 aaPredicted RBP18.7■□□□□ 0.58
SCARF1-205ENST00000571272 LTBP1Q14766 1721 aa18.69■□□□□ 0.58
SCARF1-205ENST00000571272 KLRG2A4D1S0 409 aaPredicted RBP18.69■□□□□ 0.58
SCARF1-205ENST00000571272 TMEM150BA6NC51 233 aa18.69■□□□□ 0.58
SCARF1-205ENST00000571272 MYO1EQ12965 1108 aa18.69■□□□□ 0.58
SCARF1-205ENST00000571272 MPP2Q14168 576 aa18.69■□□□□ 0.58
SCARF1-205ENST00000571272 LRRC19Q9H756 370 aa18.69■□□□□ 0.58
SCARF1-205ENST00000571272 MTA2O94776 668 aa18.69■□□□□ 0.58
SCARF1-205ENST00000571272 CLNS1AP54105 237 aaKnown RBP18.69■□□□□ 0.58
SCARF1-205ENST00000571272 TNIP1Q15025 636 aa18.69■□□□□ 0.58
SCARF1-205ENST00000571272 ZYXQ15942 572 aaKnown RBP18.69■□□□□ 0.58
SCARF1-205ENST00000571272 MORC4Q8TE76 937 aa18.69■□□□□ 0.58
SCARF1-205ENST00000571272 TRIM7Q9C029 511 aa18.69■□□□□ 0.58
SCARF1-205ENST00000571272 TMEM206Q9H813 350 aa18.69■□□□□ 0.58
SCARF1-205ENST00000571272 ATP6V0A4Q9HBG4 840 aa18.69■□□□□ 0.58
SCARF1-205ENST00000571272 PNMA3Q9UL41 463 aa18.69■□□□□ 0.58
SCARF1-205ENST00000571272 SPATA31A6Q5VVP1 1343 aa18.69■□□□□ 0.58
SCARF1-205ENST00000571272 IGF2BP3O00425 579 aaKnown RBP eCLIP18.68■□□□□ 0.58
SCARF1-205ENST00000571272 OAS1P00973 400 aaKnown RBP18.68■□□□□ 0.58
SCARF1-205ENST00000571272 CYP1A2P05177 515 aa18.68■□□□□ 0.58
SCARF1-205ENST00000571272 ADRB2P07550 413 aa18.68■□□□□ 0.58
SCARF1-205ENST00000571272 NQO1P15559 274 aaKnown RBP18.68■□□□□ 0.58
SCARF1-205ENST00000571272 DHX38Q92620 1227 aaKnown RBP18.68■□□□□ 0.58
SCARF1-205ENST00000571272 PRCCQ92733 491 aaPredicted RBP18.68■□□□□ 0.58
SCARF1-205ENST00000571272 THOC1Q96FV9 657 aaKnown RBP18.68■□□□□ 0.58
SCARF1-205ENST00000571272 ACCSQ96QU6 501 aa18.68■□□□□ 0.58
SCARF1-205ENST00000571272 CFAP73A6NFT4 308 aa18.68■□□□□ 0.58
SCARF1-205ENST00000571272 SUN1O94901 812 aa18.68■□□□□ 0.58
SCARF1-205ENST00000571272 CYP11B1P15538 503 aa18.68■□□□□ 0.58
SCARF1-205ENST00000571272 ALDH5A1P51649 535 aaPredicted RBP18.68■□□□□ 0.58
SCARF1-205ENST00000571272 CBWD2Q8IUF1 395 aa18.68■□□□□ 0.58
SCARF1-205ENST00000571272 AGAP11Q8TF27 550 aa18.68■□□□□ 0.58
SCARF1-205ENST00000571272 PSPC1Q8WXF1 523 aaKnown RBP18.68■□□□□ 0.58
SCARF1-205ENST00000571272 FAM118BQ9BPY3 351 aa18.68■□□□□ 0.58
SCARF1-205ENST00000571272 HERPUD2Q9BSE4 406 aa18.68■□□□□ 0.58
SCARF1-205ENST00000571272 GPRC5CQ9NQ84 441 aa18.68■□□□□ 0.58
SCARF1-205ENST00000571272 GTF3C4Q9UKN8 822 aa18.68■□□□□ 0.58
SCARF1-205ENST00000571272 QSER1Q2KHR3 1735 aa18.68■□□□□ 0.58
SCARF1-205ENST00000571272 P4HA2O15460 535 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 BRAFP15056 766 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 ITGA8P53708 1063 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 MYBPC2Q14324 1141 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 ZNF568Q3ZCX4 644 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 DAB2IPQ5VWQ8 1189 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 MIER3Q7Z3K6 550 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 CYP4X1Q8N118 509 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 SAAL1Q96ER3 474 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 SERPINB12Q96P63 405 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 CSRNP1Q96S65 589 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 STK38LQ9Y2H1 464 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 A8MUI8 341 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 SLC16A4O15374 487 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 THAP12O43422 761 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 VIL1P09327 827 aaKnown RBP18.67■□□□□ 0.58
SCARF1-205ENST00000571272 C2CD6Q53TS8 623 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 TLDC1Q6P9B6 456 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 HAUS6Q7Z4H7 955 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 C12orf50Q8NA57 414 aaPredicted RBP18.67■□□□□ 0.58
SCARF1-205ENST00000571272 KLHL29Q96CT2 875 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 WHRNQ9P202 907 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.67■□□□□ 0.58
SCARF1-205ENST00000571272 ANAPC7Q9UJX3 599 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 TRIM33Q9UPN9 1127 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 TTC4O95801 387 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 NSMCE1Q8WV22 266 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 VTI1AQ96AJ9 217 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 DONSONQ9NYP3 566 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 ZNF219Q9P2Y4 722 aaPredicted RBP18.67■□□□□ 0.58
SCARF1-205ENST00000571272 USP21Q9UK80 565 aa18.67■□□□□ 0.58
SCARF1-205ENST00000571272 FSCN2O14926 492 aa18.66■□□□□ 0.58
SCARF1-205ENST00000571272 ANP32DO95626 131 aa18.66■□□□□ 0.58
SCARF1-205ENST00000571272 MFAP3P55082 362 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms