RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 B4GALT5O43286 388 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 CSDE1O75534 798 aaKnown RBP7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 CLSTN1O94985 981 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 LDHAP00338 332 aaKnown RBP7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 SERPINC1P01008 464 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 CD4P01730 458 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 PIGRP01833 764 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 KRT13P13646 458 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 RAG1P15918 1043 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 ZSCAN20P17040 1043 aaPredicted RBP7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 GARTP22102 1010 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 FGFR4P22455 802 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 MTIF2P46199 727 aaKnown RBP7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 RAB27AP51159 221 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 YARSP54577 528 aaKnown RBP7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 RBL2Q08999 1139 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 MGAT3Q09327 533 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 ADAM9Q13443 819 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 KYAT1Q16773 422 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 FAM187BQ17R55 369 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 TRIM71Q2Q1W2 868 aaKnown RBP7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 TMEM259Q4ZIN3 620 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 ZCWPW2Q504Y3 356 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 FBXO47Q5MNV8 452 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 COL13A1Q5TAT6 717 aaPredicted RBP7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 ANKRD40Q6AI12 368 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 DESI1Q6ICB0 168 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 CENPPQ6IPU0 288 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 TTI2Q6NXR4 508 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 SLC27A1Q6PCB7 646 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 TAS1R3Q7RTX0 852 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 ZBTB33Q86T24 672 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 FAM228AQ86W67 206 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 FAM186BQ8IYM0 893 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 GPD1LQ8N335 351 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 XXYLT1Q8NBI6 393 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 KCNN1Q92952 543 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 CPB2Q96IY4 423 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 CNOT6LQ96LI5 555 aaKnown RBP7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 CTAGE1Q96RT6 745 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 NOC4LQ9BVI4 516 aaKnown RBP7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 STRA6Q9BX79 667 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 SRRTQ9BXP5 876 aaKnown RBP7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 IFIH1Q9BYX4 1025 aaKnown RBP7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 KCTD10Q9H3F6 313 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 SEMA6BQ9H3T3 888 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 FZD8Q9H461 694 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 THAP9Q9H5L6 903 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 MINDY3Q9H8M7 445 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 KIAA1586Q9HCI6 787 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 HSPBP1Q9NZL4 362 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 AGO2Q9UKV8 859 aaKnown RBP7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 TNFSF13BQ9Y275 285 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 SQORQ9Y6N5 450 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 SCN10AQ9Y5Y9 1956 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 PCNTO95613 3336 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 KCNJ18B7U540 433 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 TISP43B9A030 160 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 OGTO15294 1046 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 TGFB1I1O43294 461 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 NPTXRO95502 500 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 CHRNA1P02708 482 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 MCF2P10911 925 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 ARF4P18085 180 aaPredicted RBP7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 IBSPP21815 317 aaPredicted RBP7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 EEF1GP26641 437 aaKnown RBP7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 CD52P31358 61 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 RFC2P35250 354 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 PSMC2P35998 433 aaKnown RBP7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 PMS1P54277 932 aaKnown RBP7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 MCL1Q07820 350 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 FAAP100Q0VG06 881 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 MYBPC2Q14324 1141 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 KCNJ12Q14500 433 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 LPIN1Q14693 890 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 SNRNP35Q16560 246 aaKnown RBP7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 NFIL3Q16649 462 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 FILIP1LQ4L180 1135 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 HSP90AA4PQ58FG1 418 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 DCAF17Q5H9S7 520 aaPredicted RBP7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 FAM26DQ5JW98 314 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 TCERG1LQ5VWI1 586 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 RNF19BQ6ZMZ0 732 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 RETREG3Q86VR2 466 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 CDR2LQ86X02 465 aaPredicted RBP7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 DHX40Q8IX18 779 aaKnown RBP7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 C12orf56Q8IXR9 622 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 C7orf61Q8IZ16 206 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 TMEM199Q8N511 208 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 TMEM40Q8WWA1 233 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 SEPT8Q92599 483 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 APBB2Q92870 758 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 SAAL1Q96ER3 474 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 FNBP1Q96RU3 617 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 ACO2Q99798 780 aaKnown RBP7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 CBWD1Q9BRT8 395 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 FAM213AQ9BRX8 229 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 MKNK1Q9BUB5 465 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 CCDC94Q9BW85 323 aaPredicted RBP7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 FTHL17Q9BXU8 183 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms