RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 IPPQ9Y573 584 aa9.68□□□□□ -0.86
SMG1-216ENST00000569122 RBM8AQ9Y5S9 174 aaKnown RBP9.68□□□□□ -0.86
SMG1-216ENST00000569122 TAF6LQ9Y6J9 622 aa9.68□□□□□ -0.86
SMG1-216ENST00000569122 TM4SF5O14894 197 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 MSH4O15457 936 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 SGSM2O43147 1006 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 ZBTB43O43298 467 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 HRO43593 1189 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 MICAL2O94851 1124 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 ZNF806P0C7X5 589 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 RPL17P18621 184 aaKnown RBP9.67□□□□□ -0.86
SMG1-216ENST00000569122 HOXA6P31267 233 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 RFC5P40937 340 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 SCNN1GP51170 649 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 RCAN1P53805 252 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 NTHL1P78549 312 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 GRIK3Q13003 919 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 RAB33AQ14088 237 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 PSMD5Q16401 504 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 UGCGQ16739 394 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 PFKFB3Q16875 520 aaPredicted RBP9.67□□□□□ -0.86
SMG1-216ENST00000569122 UBXN11Q5T124 520 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 CEP57Q86XR8 500 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 KSR1Q8IVT5 923 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 SMG8Q8ND04 991 aaKnown RBP9.67□□□□□ -0.86
SMG1-216ENST00000569122 SLC7A14Q8TBB6 771 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 PRPF31Q8WWY3 499 aaKnown RBP9.67□□□□□ -0.86
SMG1-216ENST00000569122 SLC5A5Q92911 643 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 CCDC136Q96JN2 1154 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 CEP89Q96ST8 783 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 CLSTN3Q9BQT9 956 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 APOL6Q9BWW8 343 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 LSM14BQ9BX40 385 aaKnown RBP9.67□□□□□ -0.86
SMG1-216ENST00000569122 CSRNP2Q9H175 543 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 UNC45AQ9H3U1 944 aa9.67□□□□□ -0.86
SMG1-216ENST00000569122 KCNK5O95279 499 aa9.66□□□□□ -0.86
SMG1-216ENST00000569122 PTPN2P17706 415 aa9.66□□□□□ -0.86
SMG1-216ENST00000569122 AKAP17AQ02040 695 aaKnown RBP9.66□□□□□ -0.86
SMG1-216ENST00000569122 POU5F1BQ06416 359 aa9.66□□□□□ -0.86
SMG1-216ENST00000569122 SPIRE1Q08AE8 756 aa9.66□□□□□ -0.86
SMG1-216ENST00000569122 LAMTOR4Q0VGL1 99 aa9.66□□□□□ -0.86
SMG1-216ENST00000569122 FUT2Q10981 343 aa9.66□□□□□ -0.86
SMG1-216ENST00000569122 TFDP1Q14186 410 aa9.66□□□□□ -0.86
SMG1-216ENST00000569122 HSP90AA2PQ14568 343 aaPredicted RBP9.66□□□□□ -0.86
SMG1-216ENST00000569122 MXD4Q14582 209 aaPredicted RBP9.66□□□□□ -0.86
SMG1-216ENST00000569122 STPG1Q5TH74 334 aa9.66□□□□□ -0.86
SMG1-216ENST00000569122 FAM171A1Q5VUB5 890 aa9.66□□□□□ -0.86
SMG1-216ENST00000569122 APOA5Q6Q788 366 aa9.66□□□□□ -0.86
SMG1-216ENST00000569122 OTUD6AQ7L8S5 288 aa9.66□□□□□ -0.86
SMG1-216ENST00000569122 RAB11FIP4Q86YS3 637 aa9.66□□□□□ -0.86
SMG1-216ENST00000569122 RNF149Q8NC42 400 aa9.66□□□□□ -0.86
SMG1-216ENST00000569122 CCDC148Q8NFR7 591 aa9.66□□□□□ -0.86
SMG1-216ENST00000569122 LNX1Q8TBB1 728 aaPredicted RBP9.66□□□□□ -0.86
SMG1-216ENST00000569122 DEPDC1BQ8WUY9 529 aa9.66□□□□□ -0.86
SMG1-216ENST00000569122 COL26A1Q96A83 441 aa9.66□□□□□ -0.86
SMG1-216ENST00000569122 E2F7Q96AV8 911 aa9.66□□□□□ -0.86
SMG1-216ENST00000569122 LENG9Q96B70 501 aa9.66□□□□□ -0.86
SMG1-216ENST00000569122 MCRS1Q96EZ8 462 aa9.66□□□□□ -0.86
SMG1-216ENST00000569122 CEP170P1Q96L14 293 aa9.66□□□□□ -0.86
SMG1-216ENST00000569122 DNMT3BQ9UBC3 853 aaKnown RBP9.66□□□□□ -0.86
SMG1-216ENST00000569122 PCDHGA5Q9Y5G8 931 aa9.66□□□□□ -0.86
SMG1-216ENST00000569122 CHURC1-FNTBB4DL54 471 aa9.65□□□□□ -0.86
SMG1-216ENST00000569122 PSMD10O75832 226 aa9.65□□□□□ -0.86
SMG1-216ENST00000569122 STBD1O95210 358 aa9.65□□□□□ -0.86
SMG1-216ENST00000569122 RHOP08100 348 aa9.65□□□□□ -0.86
SMG1-216ENST00000569122 CHRNB1P11230 501 aa9.65□□□□□ -0.86
SMG1-216ENST00000569122 PSMC3P17980 439 aa9.65□□□□□ -0.86
SMG1-216ENST00000569122 ELF1P32519 619 aa9.65□□□□□ -0.86
SMG1-216ENST00000569122 QARSP47897 775 aaKnown RBP9.65□□□□□ -0.86
SMG1-216ENST00000569122 FNTBP49356 437 aa9.65□□□□□ -0.86
SMG1-216ENST00000569122 Q4G0T1 1027 aa9.65□□□□□ -0.86
SMG1-216ENST00000569122 DGKKQ5KSL6 1271 aa9.65□□□□□ -0.86
SMG1-216ENST00000569122 RTP2Q5QGT7 225 aa9.65□□□□□ -0.86
SMG1-216ENST00000569122 TTC22Q5TAA0 569 aa9.65□□□□□ -0.86
SMG1-216ENST00000569122 RNF20Q5VTR2 975 aa9.65□□□□□ -0.86
SMG1-216ENST00000569122 TANGO2Q6ICL3 276 aa9.65□□□□□ -0.86
SMG1-216ENST00000569122 PRSS55Q6UWB4 352 aaPredicted RBP9.65□□□□□ -0.86
SMG1-216ENST00000569122 ANO5Q75V66 913 aa9.65□□□□□ -0.86
SMG1-216ENST00000569122 CACNA2D4Q7Z3S7 1137 aa9.65□□□□□ -0.86
SMG1-216ENST00000569122 ZNF687Q8N1G0 1237 aa9.65□□□□□ -0.86
SMG1-216ENST00000569122 SYNPOQ8N3V7 929 aa9.65□□□□□ -0.86
SMG1-216ENST00000569122 FAM160A2Q8N612 972 aaPredicted RBP9.65□□□□□ -0.86
SMG1-216ENST00000569122 B3GALT6Q96L58 329 aa9.65□□□□□ -0.86
SMG1-216ENST00000569122 ZFP42Q96MM3 310 aa9.65□□□□□ -0.86
SMG1-216ENST00000569122 C8orf33Q9H7E9 229 aaPredicted RBP9.65□□□□□ -0.86
SMG1-216ENST00000569122 ZNF334Q9HCZ1 680 aaPredicted RBP9.65□□□□□ -0.86
SMG1-216ENST00000569122 MIOSQ9NXC5 875 aa9.65□□□□□ -0.86
SMG1-216ENST00000569122 PIAS3Q9Y6X2 628 aa9.65□□□□□ -0.86
SMG1-216ENST00000569122 ANKRD11Q6UB99 2663 aaPredicted RBP9.65□□□□□ -0.87
SMG1-216ENST00000569122 CCDC163A0A0D9SF12 145 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 GOLGA8AA7E2F4 631 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 GOLGA8BA8MQT2 603 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 ZNF263O14978 683 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 AXIN1O15169 862 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 TRAPPC3O43617 180 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 LRG1P02750 347 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 SATB1Q01826 763 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 PTGDRQ13258 359 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 TUSC3Q13454 348 aa9.64□□□□□ -0.87
SMG1-216ENST00000569122 CYP4A22Q5TCH4 519 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms