RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 CHGBP05060 677 aa7.14□□□□□ -1.27
UBR1-208ENST00000569066 MYF5P13349 255 aa7.14□□□□□ -1.27
UBR1-208ENST00000569066 DDCP20711 480 aa7.14□□□□□ -1.27
UBR1-208ENST00000569066 ATP8B2P98198 1209 aa7.14□□□□□ -1.27
UBR1-208ENST00000569066 POLD3Q15054 466 aaPredicted RBP7.14□□□□□ -1.27
UBR1-208ENST00000569066 MAN2A1Q16706 1144 aa7.14□□□□□ -1.27
UBR1-208ENST00000569066 TUBB8Q3ZCM7 444 aa7.14□□□□□ -1.27
UBR1-208ENST00000569066 PRAMEF14Q5SWL7 426 aa7.14□□□□□ -1.27
UBR1-208ENST00000569066 KRT78Q8N1N4 520 aa7.14□□□□□ -1.27
UBR1-208ENST00000569066 OR14K1Q8NGZ2 314 aa7.14□□□□□ -1.27
UBR1-208ENST00000569066 KIAA1191Q96A73 305 aa7.14□□□□□ -1.27
UBR1-208ENST00000569066 C1orf43Q9BWL3 253 aa7.14□□□□□ -1.27
UBR1-208ENST00000569066 BCO1Q9HAY6 547 aa7.14□□□□□ -1.27
UBR1-208ENST00000569066 TPCN1Q9ULQ1 816 aa7.14□□□□□ -1.27
UBR1-208ENST00000569066 CTDP1Q9Y5B0 961 aaPredicted RBP7.14□□□□□ -1.27
UBR1-208ENST00000569066 ZMYM3Q14202 1370 aa7.14□□□□□ -1.27
UBR1-208ENST00000569066 ABHD14A-ACY1A0A1B0GW23 586 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 RHPN2P1A8MT19 583 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 NT5C1B-RDH14C9J2C7 533 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 ETV2O00321 342 aaPredicted RBP7.13□□□□□ -1.27
UBR1-208ENST00000569066 PHF2O75151 1096 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 SEMA7AO75326 666 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 AHSGP02765 367 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 TYRP14679 529 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 NPR1P16066 1061 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 PI3P19957 117 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 ALDH1A3P47895 512 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 CHAF1AQ13111 956 aaPredicted RBP7.13□□□□□ -1.27
UBR1-208ENST00000569066 MCTP2Q6DN12 878 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 CIAPIN1Q6FI81 312 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 OR2C3Q8N628 320 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 KCNN1Q92952 543 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 PAWRQ96IZ0 340 aaKnown RBP7.13□□□□□ -1.27
UBR1-208ENST00000569066 RIPOR3Q96MK2 946 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 MYOCQ99972 504 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 SENP6Q9GZR1 1112 aaPredicted RBP7.13□□□□□ -1.27
UBR1-208ENST00000569066 PCDH18Q9HCL0 1135 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 GPRC5DQ9NZD1 345 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 CDC23Q9UJX2 597 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 RASA4BC9J798 803 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 F8W8V4 182 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 SLC16A6O15403 523 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 RASA4O43374 803 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 MGEA5O60502 916 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 NBNO60934 754 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 SBK3P0C264 359 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 RPL13P26373 211 aaKnown RBP7.13□□□□□ -1.27
UBR1-208ENST00000569066 KIR2DL3P43628 341 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 CASP5P51878 434 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 MTM1Q13496 603 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 VWA3BQ502W6 1294 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 THEMIS2Q5TEJ8 643 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 FAM180AQ6UWF9 173 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 IFNL2Q8IZJ0 200 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 FAM9AQ8IZU1 332 aaPredicted RBP7.13□□□□□ -1.27
UBR1-208ENST00000569066 PLA2G15Q8NCC3 412 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 PWWP2AQ96N64 755 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 STK32BQ9NY57 414 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 CPNE7Q9UBL6 633 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 SNX13Q9Y5W8 968 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 IRAK3Q9Y616 596 aa7.13□□□□□ -1.27
UBR1-208ENST00000569066 TBX3O15119 743 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 DAPK3O43293 454 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 SETSIPP0DME0 302 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 TNFSF4P23510 183 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 PTPN7P35236 360 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 CASRP41180 1078 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 MEOX1P50221 254 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 ATP2C1P98194 919 aaPredicted RBP7.12□□□□□ -1.27
UBR1-208ENST00000569066 FLYWCH1Q4VC44 716 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 C19orf54Q5BKX5 351 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 ENAHQ8N8S7 591 aaPredicted RBP7.12□□□□□ -1.27
UBR1-208ENST00000569066 ANKRD53Q8N9V6 530 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 POF1BQ8WVV4 589 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 ANKS1AQ92625 1134 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 PGBD4Q96DM1 585 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 APIPQ96GX9 242 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 NUP62CLQ9H1M0 184 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 MANSC1Q9H8J5 431 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 PNPOQ9NVS9 261 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 ABCB4P21439 1286 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 PHKA1P46020 1223 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 IFIT5Q13325 482 aaKnown RBP7.12□□□□□ -1.27
UBR1-208ENST00000569066 FGL2Q14314 439 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 LONRF3Q496Y0 759 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 GADL1Q6ZQY3 521 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 GCDHQ92947 438 aaPredicted RBP7.12□□□□□ -1.27
UBR1-208ENST00000569066 CEP95Q96GE4 821 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 RPL10LQ96L21 214 aaKnown RBP7.12□□□□□ -1.27
UBR1-208ENST00000569066 YTHDC1Q96MU7 727 aaKnown RBP7.12□□□□□ -1.27
UBR1-208ENST00000569066 CRB3Q9BUF7 120 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 LANCL2Q9NS86 450 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 GPRC5BQ9NZH0 403 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 VWA7Q9Y334 891 aa7.12□□□□□ -1.27
UBR1-208ENST00000569066 A0A1W2PPL8 197 aa7.11□□□□□ -1.27
UBR1-208ENST00000569066 PIP5K1CO60331 668 aa7.11□□□□□ -1.27
UBR1-208ENST00000569066 RPLP2P05387 115 aaKnown RBP7.11□□□□□ -1.27
UBR1-208ENST00000569066 C4orf46Q504U0 113 aa7.11□□□□□ -1.27
UBR1-208ENST00000569066 AGBL4Q5VU57 503 aa7.11□□□□□ -1.27
UBR1-208ENST00000569066 Q6ZUG5 572 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms