RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 GATMP50440 423 aa18.26■□□□□ 0.51
COMMD4-224ENST00000568877 YARSP54577 528 aaKnown RBP18.26■□□□□ 0.51
COMMD4-224ENST00000568877 NLRP12P59046 1061 aa18.26■□□□□ 0.51
COMMD4-224ENST00000568877 ZBTB41Q5SVQ8 909 aa18.26■□□□□ 0.51
COMMD4-224ENST00000568877 TMEM192Q8IY95 271 aa18.26■□□□□ 0.51
COMMD4-224ENST00000568877 MLKLQ8NB16 471 aa18.26■□□□□ 0.51
COMMD4-224ENST00000568877 RSPH1Q8WYR4 309 aa18.26■□□□□ 0.51
COMMD4-224ENST00000568877 CASD1Q96PB1 797 aa18.26■□□□□ 0.51
COMMD4-224ENST00000568877 TMEM117Q9H0C3 514 aa18.26■□□□□ 0.51
COMMD4-224ENST00000568877 RC3H2Q9HBD1 1191 aaKnown RBP18.26■□□□□ 0.51
COMMD4-224ENST00000568877 HSPBP1Q9NZL4 362 aa18.26■□□□□ 0.51
COMMD4-224ENST00000568877 KLK14Q9P0G3 267 aa18.26■□□□□ 0.51
COMMD4-224ENST00000568877 CPSF3Q9UKF6 684 aaKnown RBP18.26■□□□□ 0.51
COMMD4-224ENST00000568877 PTPRSQ13332 1948 aa18.25■□□□□ 0.51
COMMD4-224ENST00000568877 RANBP2P49792 3224 aaKnown RBP18.25■□□□□ 0.51
COMMD4-224ENST00000568877 ARL5CA6NH57 179 aa18.25■□□□□ 0.51
COMMD4-224ENST00000568877 TBKBP1A7MCY6 615 aa18.25■□□□□ 0.51
COMMD4-224ENST00000568877 LDHAP00338 332 aaKnown RBP18.25■□□□□ 0.51
COMMD4-224ENST00000568877 MLH1P40692 756 aa18.25■□□□□ 0.51
COMMD4-224ENST00000568877 TNFSF9P41273 254 aa18.25■□□□□ 0.51
COMMD4-224ENST00000568877 LRIT3Q3SXY7 679 aa18.25■□□□□ 0.51
COMMD4-224ENST00000568877 ZCWPW2Q504Y3 356 aa18.25■□□□□ 0.51
COMMD4-224ENST00000568877 CENPPQ6IPU0 288 aa18.25■□□□□ 0.51
COMMD4-224ENST00000568877 SASS6Q6UVJ0 657 aa18.25■□□□□ 0.51
COMMD4-224ENST00000568877 TMEM174Q8WUU8 243 aa18.25■□□□□ 0.51
COMMD4-224ENST00000568877 P2RX5Q93086 422 aa18.25■□□□□ 0.51
COMMD4-224ENST00000568877 SAAL1Q96ER3 474 aa18.25■□□□□ 0.51
COMMD4-224ENST00000568877 GAD1Q99259 594 aa18.25■□□□□ 0.51
COMMD4-224ENST00000568877 FAM213AQ9BRX8 229 aa18.25■□□□□ 0.51
COMMD4-224ENST00000568877 TOPORSQ9NS56 1045 aaPredicted RBP18.25■□□□□ 0.51
COMMD4-224ENST00000568877 INPP5FQ9Y2H2 1132 aa18.25■□□□□ 0.51
COMMD4-224ENST00000568877 PCDHA11Q9Y5I1 949 aa18.25■□□□□ 0.51
COMMD4-224ENST00000568877 GOLGA8IPA6NC78 632 aa18.24■□□□□ 0.51
COMMD4-224ENST00000568877 GOLGA8JA6NMD2 632 aa18.24■□□□□ 0.51
COMMD4-224ENST00000568877 INPPL1O15357 1258 aa18.24■□□□□ 0.51
COMMD4-224ENST00000568877 EXTL3O43909 919 aa18.24■□□□□ 0.51
COMMD4-224ENST00000568877 NR3C1P04150 777 aa18.24■□□□□ 0.51
COMMD4-224ENST00000568877 CCNE1P24864 410 aa18.24■□□□□ 0.51
COMMD4-224ENST00000568877 CYP2J2P51589 502 aa18.24■□□□□ 0.51
COMMD4-224ENST00000568877 AFF1P51825 1210 aaKnown RBP18.24■□□□□ 0.51
COMMD4-224ENST00000568877 SMAD3P84022 425 aaKnown RBP18.24■□□□□ 0.51
COMMD4-224ENST00000568877 BTG3Q14201 252 aaPredicted RBP18.24■□□□□ 0.51
COMMD4-224ENST00000568877 MYBPC2Q14324 1141 aa18.24■□□□□ 0.51
COMMD4-224ENST00000568877 NFIL3Q16649 462 aa18.24■□□□□ 0.51
COMMD4-224ENST00000568877 SLC10A6Q3KNW5 377 aa18.24■□□□□ 0.51
COMMD4-224ENST00000568877 PAN2Q504Q3 1202 aaKnown RBP18.24■□□□□ 0.51
COMMD4-224ENST00000568877 NOMO2Q5JPE7 1267 aa18.24■□□□□ 0.51
COMMD4-224ENST00000568877 KLHL10Q6JEL2 608 aa18.24■□□□□ 0.51
COMMD4-224ENST00000568877 CRELD2Q6UXH1 353 aaPredicted RBP18.24■□□□□ 0.51
COMMD4-224ENST00000568877 SLC9A9Q8IVB4 645 aa18.24■□□□□ 0.51
COMMD4-224ENST00000568877 CMTR2Q8IYT2 770 aaKnown RBP18.24■□□□□ 0.51
COMMD4-224ENST00000568877 GPD1LQ8N335 351 aa18.24■□□□□ 0.51
COMMD4-224ENST00000568877 ZSWIM2Q8NEG5 633 aa18.24■□□□□ 0.51
COMMD4-224ENST00000568877 URGCPQ8TCY9 931 aa18.24■□□□□ 0.51
COMMD4-224ENST00000568877 SP7Q8TDD2 431 aaPredicted RBP18.24■□□□□ 0.51
COMMD4-224ENST00000568877 ZFP42Q96MM3 310 aa18.24■□□□□ 0.51
COMMD4-224ENST00000568877 PBX4Q9BYU1 374 aa18.24■□□□□ 0.51
COMMD4-224ENST00000568877 RPF1Q9H9Y2 349 aaKnown RBP18.24■□□□□ 0.51
COMMD4-224ENST00000568877 DMAC2Q9NW81 257 aa18.24■□□□□ 0.51
COMMD4-224ENST00000568877 MEFVO15553 781 aaPredicted RBP18.23■□□□□ 0.51
COMMD4-224ENST00000568877 LETM1O95202 739 aaPredicted RBP18.23■□□□□ 0.51
COMMD4-224ENST00000568877 CXCL8P10145 99 aa18.23■□□□□ 0.51
COMMD4-224ENST00000568877 MYOGP15173 224 aa18.23■□□□□ 0.51
COMMD4-224ENST00000568877 PBX2P40425 430 aa18.23■□□□□ 0.51
COMMD4-224ENST00000568877 PMS1P54277 932 aaKnown RBP18.23■□□□□ 0.51
COMMD4-224ENST00000568877 POU5F1Q01860 360 aaKnown RBP18.23■□□□□ 0.51
COMMD4-224ENST00000568877 RAB30Q15771 203 aa18.23■□□□□ 0.51
COMMD4-224ENST00000568877 ENOX2Q16206 610 aaKnown RBP18.23■□□□□ 0.51
COMMD4-224ENST00000568877 EDRF1Q3B7T1 1238 aa18.23■□□□□ 0.51
COMMD4-224ENST00000568877 DPCR1Q3MIW9 517 aa18.23■□□□□ 0.51
COMMD4-224ENST00000568877 XKR4Q5GH76 650 aa18.23■□□□□ 0.51
COMMD4-224ENST00000568877 ANKRD40Q6AI12 368 aa18.23■□□□□ 0.51
COMMD4-224ENST00000568877 ALKAL1Q6UXT8 129 aa18.23■□□□□ 0.51
COMMD4-224ENST00000568877 XXYLT1Q8NBI6 393 aa18.23■□□□□ 0.51
COMMD4-224ENST00000568877 GSTCDQ8NEC7 633 aa18.23■□□□□ 0.51
COMMD4-224ENST00000568877 NOC3LQ8WTT2 800 aaKnown RBP18.23■□□□□ 0.51
COMMD4-224ENST00000568877 NELFBQ8WX92 580 aa18.23■□□□□ 0.51
COMMD4-224ENST00000568877 SNX27Q96L92 541 aa18.23■□□□□ 0.51
COMMD4-224ENST00000568877 FBXL18Q96ME1 805 aa18.23■□□□□ 0.51
COMMD4-224ENST00000568877 RPS6KC1Q96S38 1066 aa18.23■□□□□ 0.51
COMMD4-224ENST00000568877 TSG101Q99816 390 aa18.23■□□□□ 0.51
COMMD4-224ENST00000568877 MRPL9Q9BYD2 267 aaKnown RBP18.23■□□□□ 0.51
COMMD4-224ENST00000568877 PLEKHA5Q9HAU0 1116 aa18.23■□□□□ 0.51
COMMD4-224ENST00000568877 KIAA1586Q9HCI6 787 aa18.23■□□□□ 0.51
COMMD4-224ENST00000568877 MIOSQ9NXC5 875 aa18.23■□□□□ 0.51
COMMD4-224ENST00000568877 KANSL3Q9P2N6 904 aa18.23■□□□□ 0.51
COMMD4-224ENST00000568877 MSRAQ9UJ68 235 aa18.23■□□□□ 0.51
COMMD4-224ENST00000568877 LCHNA4D1U4 455 aa18.22■□□□□ 0.51
COMMD4-224ENST00000568877 EXOC3O60645 756 aa18.22■□□□□ 0.51
COMMD4-224ENST00000568877 POMCP01189 267 aa18.22■□□□□ 0.51
COMMD4-224ENST00000568877 NR2F2P24468 414 aa18.22■□□□□ 0.51
COMMD4-224ENST00000568877 RPL13P26373 211 aaKnown RBP18.22■□□□□ 0.51
COMMD4-224ENST00000568877 SCNN1GP51170 649 aa18.22■□□□□ 0.51
COMMD4-224ENST00000568877 LRRC63Q05C16 580 aa18.22■□□□□ 0.51
COMMD4-224ENST00000568877 PAK1Q13153 545 aa18.22■□□□□ 0.51
COMMD4-224ENST00000568877 HSP90AA2PQ14568 343 aaPredicted RBP18.22■□□□□ 0.51
COMMD4-224ENST00000568877 LRRC55Q6ZSA7 311 aa18.22■□□□□ 0.51
COMMD4-224ENST00000568877 FIBCD1Q8N539 461 aa18.22■□□□□ 0.51
COMMD4-224ENST00000568877 CXCL16Q9H2A7 254 aa18.22■□□□□ 0.51
COMMD4-224ENST00000568877 TBC1D13Q9NVG8 400 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms