RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 CTTNQ14247 550 aaKnown RBP5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 CBX2Q14781 532 aaPredicted RBP5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 EMC2Q15006 297 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 CLLU1OSQ5K130 101 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 ATAT1Q5SQI0 421 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 NOTUMQ6P988 496 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 B3GNT9Q6UX72 402 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 ZNF598Q86UK7 904 aaKnown RBP5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 FERMT3Q86UX7 667 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 CABP7Q86V35 215 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 KSR1Q8IVT5 923 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 SUGP1Q8IWZ8 645 aaKnown RBP5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 FAM184AQ8NB25 1140 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 RNF149Q8NC42 400 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 ERMNQ8TAM6 284 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 HAS1Q92839 578 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 LPPQ93052 612 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 COL26A1Q96A83 441 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 TMEM143Q96AN5 459 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 IGSF21Q96ID5 467 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 DYDC2Q96IM9 177 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 RIPOR3Q96MK2 946 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 PRRX2Q99811 253 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 EIF2AK1Q9BQI3 630 aaKnown RBP5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 APOL5Q9BWW9 433 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 GBP3Q9H0R5 595 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 IRF2BPLQ9H1B7 796 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 ACBD3Q9H3P7 528 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 DHX33Q9H6R0 707 aaKnown RBP5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 TTC12Q9H892 705 aaPredicted RBP5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 CAPN10Q9HC96 672 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 KCNMB3Q9NPA1 279 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 MRPL17Q9NRX2 175 aaKnown RBP5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 RGL1Q9NZL6 768 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 DPP7Q9UHL4 492 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 PCDHGC5Q9Y5F6 944 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 CNTNAP2Q9UHC6 1331 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 MYH11P35749 1972 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 TMEM221A6NGB7 291 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 C2orf71A6NGG8 1288 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 HIDE1A8MVS5 230 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 BTBD18B2RXH4 712 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 LOC730098B7Z3J9 87 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 INO80B-WBP1J3KQ70 363 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 M0R296 226 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 NEMFO60524 1076 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 CLASP2O75122 1294 aaKnown RBP5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 SLITRK3O94933 977 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 GLP2RO95838 553 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 ABL1P00519 1130 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 CENPBP07199 599 aaPredicted RBP5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 GALTP07902 379 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 CTSAP10619 480 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 MCM7P33993 719 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 PBX3P40426 434 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 ZXDAP98168 799 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 CYP4A11Q02928 519 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 POU5F1BQ06416 359 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 NR5A1Q13285 461 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 NPY5RQ15761 445 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 ME3Q16798 604 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 MAP7D1Q3KQU3 841 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 PLEKHG6Q3KR16 790 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 KIAA1841Q6NSI8 718 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 TRIM67Q6ZTA4 783 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 SLC39A11Q8N1S5 342 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 NECAB1Q8N987 351 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 GTF3C6Q969F1 213 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 ACSF2Q96CM8 615 aaPredicted RBP5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 CCDC51Q96ER9 411 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 C8orf76Q96K31 380 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 ZSCAN31Q96LW9 406 aaPredicted RBP5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 NACC1Q96RE7 527 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 CITED4Q96RK1 184 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 CEP89Q96ST8 783 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 TMEM175Q9BSA9 504 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 COLEC11Q9BWP8 271 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 ADAM7Q9H2U9 754 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 NRDE2Q9H7Z3 1164 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 RSAD1Q9HA92 442 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 IFT122Q9HBG6 1241 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 PCDH12Q9NPG4 1184 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 C11orf16Q9NQ32 467 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 ANKEF1Q9NU02 776 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 AGPAT5Q9NUQ2 364 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 RNF19AQ9NV58 838 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 TBC1D13Q9NVG8 400 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 DZANK1Q9NVP4 752 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 PARP2Q9UGN5 583 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 TSR3Q9UJK0 312 aaKnown RBP5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 DBR1Q9UK59 544 aaKnown RBP5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 VAV3Q9UKW4 847 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 LIMCH1Q9UPQ0 1083 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 IRAK3Q9Y616 596 aa5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 SPTBN5Q9NRC6 3674 aaKnown RBP5.17□□□□□ -1.58
HERPUD1-213ENST00000568358 TRIP11Q15643 1979 aa5.16□□□□□ -1.58
HERPUD1-213ENST00000568358 ARID2Q68CP9 1835 aa5.16□□□□□ -1.58
HERPUD1-213ENST00000568358 ARHGEF35A5YM69 484 aa5.16□□□□□ -1.58
HERPUD1-213ENST00000568358 LRRIQ4A6NIV6 560 aa5.16□□□□□ -1.58
HERPUD1-213ENST00000568358 ZBTB39O15060 712 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms