RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 BICD1Q96G01 975 aa24■■□□□ 1.43
SPSB3-206ENST00000564709 SEPT9Q9UHD8 586 aaPredicted RBP24■■□□□ 1.43
SPSB3-206ENST00000564709 SHBGP04278 402 aa24■■□□□ 1.43
SPSB3-206ENST00000564709 CDR2Q01850 454 aa24■■□□□ 1.43
SPSB3-206ENST00000564709 MKRN4PQ13434 485 aaPredicted RBP24■■□□□ 1.43
SPSB3-206ENST00000564709 BIRC3Q13489 604 aa24■■□□□ 1.43
SPSB3-206ENST00000564709 VSIG10LQ86VR7 867 aa24■■□□□ 1.43
SPSB3-206ENST00000564709 NLRP14Q86W24 1093 aa24■■□□□ 1.43
SPSB3-206ENST00000564709 EFCAB13Q8IY85 973 aa24■■□□□ 1.43
SPSB3-206ENST00000564709 JDP2Q8WYK2 163 aa24■■□□□ 1.43
SPSB3-206ENST00000564709 ZKSCAN4Q969J2 545 aaPredicted RBP24■■□□□ 1.43
SPSB3-206ENST00000564709 FAM213AQ9BRX8 229 aa24■■□□□ 1.43
SPSB3-206ENST00000564709 RASAL2Q9UJF2 1139 aa24■■□□□ 1.43
SPSB3-206ENST00000564709 MTA2O94776 668 aa23.99■■□□□ 1.43
SPSB3-206ENST00000564709 CYP1A2P05177 515 aa23.99■■□□□ 1.43
SPSB3-206ENST00000564709 CTNNA2P26232 953 aa23.99■■□□□ 1.43
SPSB3-206ENST00000564709 RPL21P46778 160 aaKnown RBP23.99■■□□□ 1.43
SPSB3-206ENST00000564709 MAGOHP61326 146 aaKnown RBP23.99■■□□□ 1.43
SPSB3-206ENST00000564709 UBAP2Q5T6F2 1119 aaKnown RBP23.99■■□□□ 1.43
SPSB3-206ENST00000564709 CCDC137Q6PK04 289 aaKnown RBP23.99■■□□□ 1.43
SPSB3-206ENST00000564709 KIFAP3Q92845 792 aa23.99■■□□□ 1.43
SPSB3-206ENST00000564709 WNT8AQ9H1J5 351 aa23.99■■□□□ 1.43
SPSB3-206ENST00000564709 VPS33BQ9H267 617 aa23.99■■□□□ 1.43
SPSB3-206ENST00000564709 EPB41L4BQ9H329 900 aa23.99■■□□□ 1.43
SPSB3-206ENST00000564709 PTPN22Q9Y2R2 807 aa23.99■■□□□ 1.43
SPSB3-206ENST00000564709 COQ4Q9Y3A0 265 aa23.99■■□□□ 1.43
SPSB3-206ENST00000564709 RGS20O76081 388 aa23.99■■□□□ 1.43
SPSB3-206ENST00000564709 KCNA2P16389 499 aa23.99■■□□□ 1.43
SPSB3-206ENST00000564709 CHRNA3P32297 505 aa23.99■■□□□ 1.43
SPSB3-206ENST00000564709 LIG3P49916 1009 aa23.99■■□□□ 1.43
SPSB3-206ENST00000564709 PRAMEF18Q5VWM3 479 aa23.99■■□□□ 1.43
SPSB3-206ENST00000564709 PHLDB2Q86SQ0 1253 aa23.99■■□□□ 1.43
SPSB3-206ENST00000564709 ARFGAP2Q8N6H7 521 aa23.99■■□□□ 1.43
SPSB3-206ENST00000564709 MYCBPAPQ8TBZ2 947 aa23.99■■□□□ 1.43
SPSB3-206ENST00000564709 DDX1Q92499 740 aaKnown RBP23.99■■□□□ 1.43
SPSB3-206ENST00000564709 MFSD14AQ96MC6 490 aa23.99■■□□□ 1.43
SPSB3-206ENST00000564709 GRHL1Q9NZI5 618 aa23.99■■□□□ 1.43
SPSB3-206ENST00000564709 SLC12A6Q9UHW9 1150 aa23.99■■□□□ 1.43
SPSB3-206ENST00000564709 DOCK1Q14185 1865 aa23.99■■□□□ 1.43
SPSB3-206ENST00000564709 STBD1O95210 358 aa23.98■■□□□ 1.43
SPSB3-206ENST00000564709 CLUL1Q15846 466 aa23.98■■□□□ 1.43
SPSB3-206ENST00000564709 OTUD6AQ7L8S5 288 aa23.98■■□□□ 1.43
SPSB3-206ENST00000564709 CCDC60Q8IWA6 550 aaPredicted RBP23.98■■□□□ 1.43
SPSB3-206ENST00000564709 HVCN1Q96D96 273 aa23.98■■□□□ 1.43
SPSB3-206ENST00000564709 CCT8L2Q96SF2 557 aa23.98■■□□□ 1.43
SPSB3-206ENST00000564709 XPNPEP1Q9NQW7 623 aa23.98■■□□□ 1.43
SPSB3-206ENST00000564709 HACL1Q9UJ83 578 aa23.98■■□□□ 1.43
SPSB3-206ENST00000564709 GTF3C4Q9UKN8 822 aa23.98■■□□□ 1.43
SPSB3-206ENST00000564709 ERLIN2O94905 339 aa23.98■■□□□ 1.43
SPSB3-206ENST00000564709 AGBL2Q5U5Z8 902 aa23.98■■□□□ 1.43
SPSB3-206ENST00000564709 TAS1R3Q7RTX0 852 aa23.98■■□□□ 1.43
SPSB3-206ENST00000564709 FBXL18Q96ME1 805 aa23.98■■□□□ 1.43
SPSB3-206ENST00000564709 KCNJ1P48048 391 aa23.97■■□□□ 1.43
SPSB3-206ENST00000564709 PMS2P54278 862 aa23.97■■□□□ 1.43
SPSB3-206ENST00000564709 PPP2R2AP63151 447 aa23.97■■□□□ 1.43
SPSB3-206ENST00000564709 PRKCEQ02156 737 aa23.97■■□□□ 1.43
SPSB3-206ENST00000564709 TADA2BQ86TJ2 420 aa23.97■■□□□ 1.43
SPSB3-206ENST00000564709 GPD1LQ8N335 351 aa23.97■■□□□ 1.43
SPSB3-206ENST00000564709 SAMD3Q8N6K7 520 aa23.97■■□□□ 1.43
SPSB3-206ENST00000564709 TMC2Q8TDI7 906 aa23.97■■□□□ 1.43
SPSB3-206ENST00000564709 SPIRE2Q8WWL2 714 aa23.97■■□□□ 1.43
SPSB3-206ENST00000564709 GPRASP2Q96D09 838 aa23.97■■□□□ 1.43
SPSB3-206ENST00000564709 TAOK3Q9H2K8 898 aa23.97■■□□□ 1.43
SPSB3-206ENST00000564709 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.97■■□□□ 1.43
SPSB3-206ENST00000564709 RLFQ13129 1914 aa23.97■■□□□ 1.43
SPSB3-206ENST00000564709 PHIPQ8WWQ0 1821 aa23.97■■□□□ 1.43
SPSB3-206ENST00000564709 HSPA6P17066 643 aa23.96■■□□□ 1.43
SPSB3-206ENST00000564709 HMGCS2P54868 508 aa23.96■■□□□ 1.43
SPSB3-206ENST00000564709 BACE1P56817 501 aa23.96■■□□□ 1.43
SPSB3-206ENST00000564709 SLC13A5Q86YT5 568 aaPredicted RBP23.96■■□□□ 1.43
SPSB3-206ENST00000564709 MICALL2Q8IY33 904 aa23.96■■□□□ 1.43
SPSB3-206ENST00000564709 PPM1EQ8WY54 764 aa23.96■■□□□ 1.43
SPSB3-206ENST00000564709 ATP6V0A1Q93050 837 aa23.96■■□□□ 1.43
SPSB3-206ENST00000564709 TRIM7Q9C029 511 aa23.96■■□□□ 1.43
SPSB3-206ENST00000564709 SMIM23A6NLE4 172 aa23.96■■□□□ 1.43
SPSB3-206ENST00000564709 CAND2O75155 1236 aa23.96■■□□□ 1.43
SPSB3-206ENST00000564709 RARAP10276 462 aa23.96■■□□□ 1.43
SPSB3-206ENST00000564709 ZNF280AP59817 542 aaPredicted RBP23.96■■□□□ 1.43
SPSB3-206ENST00000564709 C2CD6Q53TS8 623 aa23.96■■□□□ 1.43
SPSB3-206ENST00000564709 SRCAPQ6ZRS2 3230 aa23.96■■□□□ 1.43
SPSB3-206ENST00000564709 PACS2Q86VP3 889 aa23.96■■□□□ 1.43
SPSB3-206ENST00000564709 CCDC105Q8IYK2 499 aa23.96■■□□□ 1.43
SPSB3-206ENST00000564709 MICALL1Q8N3F8 863 aa23.96■■□□□ 1.43
SPSB3-206ENST00000564709 UHMK1Q8TAS1 419 aaKnown RBP23.96■■□□□ 1.43
SPSB3-206ENST00000564709 POLR3FQ9H1D9 316 aaPredicted RBP23.96■■□□□ 1.43
SPSB3-206ENST00000564709 JPH1Q9HDC5 661 aaPredicted RBP23.96■■□□□ 1.43
SPSB3-206ENST00000564709 PCYOX1Q9UHG3 505 aa23.96■■□□□ 1.43
SPSB3-206ENST00000564709 PCDHA3Q9Y5H8 950 aa23.96■■□□□ 1.43
SPSB3-206ENST00000564709 GRIN3BO60391 1043 aa23.95■■□□□ 1.43
SPSB3-206ENST00000564709 MTERF2Q49AM1 385 aa23.95■■□□□ 1.43
SPSB3-206ENST00000564709 ACAD10Q6JQN1 1059 aa23.95■■□□□ 1.43
SPSB3-206ENST00000564709 LLGL2Q6P1M3 1020 aa23.95■■□□□ 1.43
SPSB3-206ENST00000564709 B4GALNT4Q76KP1 1039 aa23.95■■□□□ 1.43
SPSB3-206ENST00000564709 RDM1Q8NG50 284 aa23.95■■□□□ 1.43
SPSB3-206ENST00000564709 RNF25Q96BH1 459 aaPredicted RBP23.95■■□□□ 1.43
SPSB3-206ENST00000564709 NTPCRQ9BSD7 190 aaKnown RBP23.95■■□□□ 1.43
SPSB3-206ENST00000564709 A0A087WUV0 522 aaPredicted RBP23.95■■□□□ 1.42
SPSB3-206ENST00000564709 PSAPP07602 524 aa23.95■■□□□ 1.42
SPSB3-206ENST00000564709 WNT7BP56706 349 aa23.95■■□□□ 1.42
SPSB3-206ENST00000564709 MCCD1P59942 119 aaPredicted RBP23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms