RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 PIN4Q9Y237 131 aaKnown RBP14.07□□□□□ -0.16
SPG7-209ENST00000564047 NCOR1O75376 2440 aa14.06□□□□□ -0.16
SPG7-209ENST00000564047 LRRC10BA6NIK2 292 aa14.06□□□□□ -0.16
SPG7-209ENST00000564047 OGTO15294 1046 aa14.06□□□□□ -0.16
SPG7-209ENST00000564047 ATP1A3P13637 1013 aa14.06□□□□□ -0.16
SPG7-209ENST00000564047 CD52P31358 61 aa14.06□□□□□ -0.16
SPG7-209ENST00000564047 NFX1Q12986 1120 aaKnown RBP14.06□□□□□ -0.16
SPG7-209ENST00000564047 MBTPS1Q14703 1052 aa14.06□□□□□ -0.16
SPG7-209ENST00000564047 KYAT1Q16773 422 aa14.06□□□□□ -0.16
SPG7-209ENST00000564047 DCAF4L1Q3SXM0 396 aa14.06□□□□□ -0.16
SPG7-209ENST00000564047 CCDC40Q4G0X9 1142 aa14.06□□□□□ -0.16
SPG7-209ENST00000564047 HSP90AA4PQ58FG1 418 aa14.06□□□□□ -0.16
SPG7-209ENST00000564047 SLC27A1Q6PCB7 646 aa14.06□□□□□ -0.16
SPG7-209ENST00000564047 ZBTB33Q86T24 672 aa14.06□□□□□ -0.16
SPG7-209ENST00000564047 FAM186BQ8IYM0 893 aa14.06□□□□□ -0.16
SPG7-209ENST00000564047 SAAL1Q96ER3 474 aa14.06□□□□□ -0.16
SPG7-209ENST00000564047 BORCS6Q96GS4 357 aa14.06□□□□□ -0.16
SPG7-209ENST00000564047 PRKAG2Q9UGJ0 569 aa14.06□□□□□ -0.16
SPG7-209ENST00000564047 ZNF233A6NK53 670 aa14.05□□□□□ -0.16
SPG7-209ENST00000564047 FAM189A1O60320 539 aa14.05□□□□□ -0.16
SPG7-209ENST00000564047 MTIF2P46199 727 aaKnown RBP14.05□□□□□ -0.16
SPG7-209ENST00000564047 MCCD1P59942 119 aaPredicted RBP14.05□□□□□ -0.16
SPG7-209ENST00000564047 FANCCQ00597 558 aa14.05□□□□□ -0.16
SPG7-209ENST00000564047 POU5F1Q01860 360 aaKnown RBP14.05□□□□□ -0.16
SPG7-209ENST00000564047 ENPEPQ07075 957 aa14.05□□□□□ -0.16
SPG7-209ENST00000564047 SNRNP35Q16560 246 aaKnown RBP14.05□□□□□ -0.16
SPG7-209ENST00000564047 SARM1Q6SZW1 724 aa14.05□□□□□ -0.16
SPG7-209ENST00000564047 INTS8Q75QN2 995 aaKnown RBP14.05□□□□□ -0.16
SPG7-209ENST00000564047 CDR2LQ86X02 465 aaPredicted RBP14.05□□□□□ -0.16
SPG7-209ENST00000564047 CBWD2Q8IUF1 395 aa14.05□□□□□ -0.16
SPG7-209ENST00000564047 TRIM59Q8IWR1 403 aa14.05□□□□□ -0.16
SPG7-209ENST00000564047 FAM213AQ9BRX8 229 aa14.05□□□□□ -0.16
SPG7-209ENST00000564047 OSBPL7Q9BZF2 842 aa14.05□□□□□ -0.16
SPG7-209ENST00000564047 ARMCX3Q9UH62 379 aaPredicted RBP14.05□□□□□ -0.16
SPG7-209ENST00000564047 UMODL1Q5DID0 1318 aa14.05□□□□□ -0.16
SPG7-209ENST00000564047 GOLGA8IPA6NC78 632 aa14.04□□□□□ -0.16
SPG7-209ENST00000564047 GOLGA8JA6NMD2 632 aa14.04□□□□□ -0.16
SPG7-209ENST00000564047 KIAA0355O15063 1070 aa14.04□□□□□ -0.16
SPG7-209ENST00000564047 SERPINC1P01008 464 aa14.04□□□□□ -0.16
SPG7-209ENST00000564047 HARSP12081 509 aaKnown RBP14.04□□□□□ -0.16
SPG7-209ENST00000564047 KRT13P13646 458 aa14.04□□□□□ -0.16
SPG7-209ENST00000564047 ZSCAN20P17040 1043 aaPredicted RBP14.04□□□□□ -0.16
SPG7-209ENST00000564047 PPP2R3AQ06190 1150 aa14.04□□□□□ -0.16
SPG7-209ENST00000564047 GPNMBQ14956 572 aa14.04□□□□□ -0.16
SPG7-209ENST00000564047 KRT31Q15323 416 aa14.04□□□□□ -0.16
SPG7-209ENST00000564047 UBXN11Q5T124 520 aa14.04□□□□□ -0.16
SPG7-209ENST00000564047 CRELD2Q6UXH1 353 aaPredicted RBP14.04□□□□□ -0.16
SPG7-209ENST00000564047 APTXQ7Z2E3 356 aaKnown RBP14.04□□□□□ -0.16
SPG7-209ENST00000564047 CREBRFQ8IUR6 639 aa14.04□□□□□ -0.16
SPG7-209ENST00000564047 RDH13Q8NBN7 331 aa14.04□□□□□ -0.16
SPG7-209ENST00000564047 ZSWIM2Q8NEG5 633 aa14.04□□□□□ -0.16
SPG7-209ENST00000564047 MFSD14AQ96MC6 490 aa14.04□□□□□ -0.16
SPG7-209ENST00000564047 TUBGCP2Q9BSJ2 902 aa14.04□□□□□ -0.16
SPG7-209ENST00000564047 TRAIPQ9BWF2 469 aa14.04□□□□□ -0.16
SPG7-209ENST00000564047 PPP1R12CQ9BZL4 782 aa14.04□□□□□ -0.16
SPG7-209ENST00000564047 WNT8AQ9H1J5 351 aa14.04□□□□□ -0.16
SPG7-209ENST00000564047 CPSF3Q9UKF6 684 aaKnown RBP14.04□□□□□ -0.16
SPG7-209ENST00000564047 NBNO60934 754 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 NPTXRO95502 500 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 CXCL10P02778 98 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 ADRB2P07550 413 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 TPM2P07951 284 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 CLTAP09496 248 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 FOSL2P15408 326 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 CYP2C18P33260 490 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 RFC2P35250 354 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 GRM5P41594 1212 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 ACOT2P49753 483 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 COPB1P53618 953 aaKnown RBP14.03□□□□□ -0.16
SPG7-209ENST00000564047 CYP24A1Q07973 514 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 BFSP1Q12934 665 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 DSC3Q14574 896 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 MAN2A1Q16706 1144 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 FILIP1LQ4L180 1135 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 PLEKHG4Q58EX7 1191 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 ZBTB41Q5SVQ8 909 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 USP37Q86T82 979 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 BRSK2Q8IWQ3 736 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 THNSL1Q8IYQ7 743 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 CEP120Q8N960 986 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 TMC2Q8TDI7 906 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 MYLIPQ8WY64 445 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 APBB2Q92870 758 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 FTHL17Q9BXU8 183 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 EIF2AQ9BY44 585 aaKnown RBP14.03□□□□□ -0.16
SPG7-209ENST00000564047 IFIH1Q9BYX4 1025 aaKnown RBP14.03□□□□□ -0.16
SPG7-209ENST00000564047 TRIM6Q9C030 488 aaPredicted RBP14.03□□□□□ -0.16
SPG7-209ENST00000564047 TMX1Q9H3N1 280 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 TAB2Q9NYJ8 693 aa14.03□□□□□ -0.16
SPG7-209ENST00000564047 RBAKQ9NYW8 714 aaPredicted RBP14.03□□□□□ -0.16
SPG7-209ENST00000564047 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.03□□□□□ -0.16
SPG7-209ENST00000564047 LTBP2Q14767 1821 aa14.02□□□□□ -0.16
SPG7-209ENST00000564047 A0A1B0GTH6 734 aa14.02□□□□□ -0.17
SPG7-209ENST00000564047 TNFRSF10AO00220 468 aa14.02□□□□□ -0.17
SPG7-209ENST00000564047 AP5Z1O43299 807 aa14.02□□□□□ -0.17
SPG7-209ENST00000564047 CBFA2T2O43439 604 aa14.02□□□□□ -0.17
SPG7-209ENST00000564047 TIMP1P01033 207 aa14.02□□□□□ -0.17
SPG7-209ENST00000564047 STAG3L1P0CL83 205 aa14.02□□□□□ -0.17
SPG7-209ENST00000564047 MSNP26038 577 aaKnown RBP14.02□□□□□ -0.17
SPG7-209ENST00000564047 TNFSF9P41273 254 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms