RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 MRPS6P82932 125 aaKnown RBP23.82■■□□□ 1.4
LINC01960-201ENST00000563759 ZBED6P86452 979 aa23.82■■□□□ 1.4
LINC01960-201ENST00000563759 ADPGKQ9BRR6 497 aa23.82■■□□□ 1.4
LINC01960-201ENST00000563759 PAK6Q9NQU5 681 aaPredicted RBP23.82■■□□□ 1.4
LINC01960-201ENST00000563759 ESPNB1AK53 854 aa23.81■■□□□ 1.4
LINC01960-201ENST00000563759 P4HA2O15460 535 aa23.81■■□□□ 1.4
LINC01960-201ENST00000563759 CRYBB1P53674 252 aaPredicted RBP23.81■■□□□ 1.4
LINC01960-201ENST00000563759 TSR1Q2NL82 804 aaKnown RBP23.81■■□□□ 1.4
LINC01960-201ENST00000563759 TRIM65Q6PJ69 517 aa23.81■■□□□ 1.4
LINC01960-201ENST00000563759 BRSK2Q8IWQ3 736 aa23.81■■□□□ 1.4
LINC01960-201ENST00000563759 THNSL1Q8IYQ7 743 aa23.81■■□□□ 1.4
LINC01960-201ENST00000563759 POP1Q99575 1024 aaKnown RBP23.81■■□□□ 1.4
LINC01960-201ENST00000563759 PDE11AQ9HCR9 933 aa23.81■■□□□ 1.4
LINC01960-201ENST00000563759 PLCB1Q9NQ66 1216 aa23.81■■□□□ 1.4
LINC01960-201ENST00000563759 STARD7Q9NQZ5 370 aa23.81■■□□□ 1.4
LINC01960-201ENST00000563759 TOPORSQ9NS56 1045 aaPredicted RBP23.81■■□□□ 1.4
LINC01960-201ENST00000563759 CEP72Q9P209 647 aa23.81■■□□□ 1.4
LINC01960-201ENST00000563759 PYCARDQ9ULZ3 195 aa23.81■■□□□ 1.4
LINC01960-201ENST00000563759 TRIP11Q15643 1979 aa23.81■■□□□ 1.4
LINC01960-201ENST00000563759 MCF2P10911 925 aa23.81■■□□□ 1.4
LINC01960-201ENST00000563759 TNNI1P19237 187 aa23.81■■□□□ 1.4
LINC01960-201ENST00000563759 MCCD1P59942 119 aaPredicted RBP23.81■■□□□ 1.4
LINC01960-201ENST00000563759 PTPN11Q06124 597 aaPredicted RBP23.81■■□□□ 1.4
LINC01960-201ENST00000563759 MTFR1Q15390 333 aa23.81■■□□□ 1.4
LINC01960-201ENST00000563759 TMEM40Q8WWA1 233 aa23.81■■□□□ 1.4
LINC01960-201ENST00000563759 CELF4Q9BZC1 486 aaKnown RBP23.81■■□□□ 1.4
LINC01960-201ENST00000563759 TMEM117Q9H0C3 514 aa23.81■■□□□ 1.4
LINC01960-201ENST00000563759 RNF208Q9H0X6 261 aa23.81■■□□□ 1.4
LINC01960-201ENST00000563759 TMEM8AQ9HCN3 771 aa23.81■■□□□ 1.4
LINC01960-201ENST00000563759 RALGAPA2Q2PPJ7 1873 aa23.8■■□□□ 1.4
LINC01960-201ENST00000563759 ACTN1P12814 892 aa23.8■■□□□ 1.4
LINC01960-201ENST00000563759 GTF2H1P32780 548 aa23.8■■□□□ 1.4
LINC01960-201ENST00000563759 POLR2FP61218 127 aaKnown RBP23.8■■□□□ 1.4
LINC01960-201ENST00000563759 OSTNP61366 133 aa23.8■■□□□ 1.4
LINC01960-201ENST00000563759 APBA1Q02410 837 aa23.8■■□□□ 1.4
LINC01960-201ENST00000563759 KRT39Q6A163 491 aa23.8■■□□□ 1.4
LINC01960-201ENST00000563759 OR8K1Q8NGG5 319 aa23.8■■□□□ 1.4
LINC01960-201ENST00000563759 WNT8BQ93098 351 aa23.8■■□□□ 1.4
LINC01960-201ENST00000563759 DEFB118Q96PH6 123 aa23.8■■□□□ 1.4
LINC01960-201ENST00000563759 DNAJC7Q99615 494 aa23.8■■□□□ 1.4
LINC01960-201ENST00000563759 TMX1Q9H3N1 280 aa23.8■■□□□ 1.4
LINC01960-201ENST00000563759 NLRC4Q9NPP4 1024 aa23.8■■□□□ 1.4
LINC01960-201ENST00000563759 CPSF3Q9UKF6 684 aaKnown RBP23.8■■□□□ 1.4
LINC01960-201ENST00000563759 TRPV2Q9Y5S1 764 aa23.8■■□□□ 1.4
LINC01960-201ENST00000563759 CDY2AQ9Y6F7 541 aa23.8■■□□□ 1.4
LINC01960-201ENST00000563759 A0A1B0GUA9 196 aa23.79■■□□□ 1.4
LINC01960-201ENST00000563759 NOL4O94818 638 aa23.79■■□□□ 1.4
LINC01960-201ENST00000563759 CTSHP09668 335 aa23.79■■□□□ 1.4
LINC01960-201ENST00000563759 CCL5P13501 91 aa23.79■■□□□ 1.4
LINC01960-201ENST00000563759 APBB1IPQ7Z5R6 666 aaPredicted RBP23.79■■□□□ 1.4
LINC01960-201ENST00000563759 CEP120Q8N960 986 aa23.79■■□□□ 1.4
LINC01960-201ENST00000563759 NAA15Q9BXJ9 866 aaKnown RBP23.79■■□□□ 1.4
LINC01960-201ENST00000563759 EDEM3Q9BZQ6 932 aa23.79■■□□□ 1.4
LINC01960-201ENST00000563759 INTS2Q9H0H0 1204 aaKnown RBP23.79■■□□□ 1.4
LINC01960-201ENST00000563759 GANQ9H2C0 597 aa23.79■■□□□ 1.4
LINC01960-201ENST00000563759 TRMT13Q9NUP7 481 aaKnown RBP23.79■■□□□ 1.4
LINC01960-201ENST00000563759 NOTUMQ6P988 496 aa23.79■■□□□ 1.4
LINC01960-201ENST00000563759 TMEM139Q8IV31 216 aa23.79■■□□□ 1.4
LINC01960-201ENST00000563759 FAM212AQ96EL1 285 aa23.79■■□□□ 1.4
LINC01960-201ENST00000563759 PHF24Q9UPV7 400 aa23.79■■□□□ 1.4
LINC01960-201ENST00000563759 A0A0U1RQG5 324 aaPredicted RBP23.78■■□□□ 1.4
LINC01960-201ENST00000563759 DNM1LO00429 736 aa23.78■■□□□ 1.4
LINC01960-201ENST00000563759 PMM2O15305 246 aa23.78■■□□□ 1.4
LINC01960-201ENST00000563759 WNT7BP56706 349 aa23.78■■□□□ 1.4
LINC01960-201ENST00000563759 KLHDC7AQ5VTJ3 777 aa23.78■■□□□ 1.4
LINC01960-201ENST00000563759 LMBRD2Q68DH5 695 aaPredicted RBP23.78■■□□□ 1.4
LINC01960-201ENST00000563759 RRAGAQ7L523 313 aa23.78■■□□□ 1.4
LINC01960-201ENST00000563759 CTU1Q7Z7A3 348 aaKnown RBP23.78■■□□□ 1.4
LINC01960-201ENST00000563759 CGRRF1Q99675 332 aa23.78■■□□□ 1.4
LINC01960-201ENST00000563759 ZNHIT6Q9NWK9 470 aaKnown RBP23.78■■□□□ 1.4
LINC01960-201ENST00000563759 UCHL3P15374 230 aa23.77■■□□□ 1.4
LINC01960-201ENST00000563759 THPOP40225 353 aa23.77■■□□□ 1.4
LINC01960-201ENST00000563759 CLDN10P78369 228 aa23.77■■□□□ 1.4
LINC01960-201ENST00000563759 KYAT1Q16773 422 aa23.77■■□□□ 1.4
LINC01960-201ENST00000563759 DCAF4L1Q3SXM0 396 aa23.77■■□□□ 1.4
LINC01960-201ENST00000563759 EPC2Q52LR7 807 aa23.77■■□□□ 1.4
LINC01960-201ENST00000563759 SLC27A1Q6PCB7 646 aa23.77■■□□□ 1.4
LINC01960-201ENST00000563759 RPAINQ86UA6 219 aa23.77■■□□□ 1.4
LINC01960-201ENST00000563759 PIN4Q9Y237 131 aaKnown RBP23.77■■□□□ 1.4
LINC01960-201ENST00000563759 LRRC53A6NM62 1247 aa23.77■■□□□ 1.4
LINC01960-201ENST00000563759 HSPA8P11142 646 aaKnown RBP23.77■■□□□ 1.4
LINC01960-201ENST00000563759 AXLP30530 894 aa23.77■■□□□ 1.4
LINC01960-201ENST00000563759 PTK7Q13308 1070 aa23.77■■□□□ 1.4
LINC01960-201ENST00000563759 SV2AQ7L0J3 742 aa23.77■■□□□ 1.4
LINC01960-201ENST00000563759 BAP1Q92560 729 aa23.77■■□□□ 1.4
LINC01960-201ENST00000563759 RPF1Q9H9Y2 349 aaKnown RBP23.77■■□□□ 1.4
LINC01960-201ENST00000563759 SIX2Q9NPC8 291 aa23.77■■□□□ 1.4
LINC01960-201ENST00000563759 FHOD1Q9Y613 1164 aa23.77■■□□□ 1.4
LINC01960-201ENST00000563759 ARHGAP6O43182 974 aa23.76■■□□□ 1.39
LINC01960-201ENST00000563759 CLTAP09496 248 aa23.76■■□□□ 1.39
LINC01960-201ENST00000563759 STAG3L1P0CL83 205 aa23.76■■□□□ 1.39
LINC01960-201ENST00000563759 CXCL8P10145 99 aa23.76■■□□□ 1.39
LINC01960-201ENST00000563759 HOXA11P31270 313 aaPredicted RBP23.76■■□□□ 1.39
LINC01960-201ENST00000563759 SURF1Q15526 300 aa23.76■■□□□ 1.39
LINC01960-201ENST00000563759 ENOX2Q16206 610 aaKnown RBP23.76■■□□□ 1.39
LINC01960-201ENST00000563759 FBXL13Q8NEE6 735 aa23.76■■□□□ 1.39
LINC01960-201ENST00000563759 SENP6Q9GZR1 1112 aaPredicted RBP23.76■■□□□ 1.39
LINC01960-201ENST00000563759 APEX2Q9UBZ4 518 aa23.76■■□□□ 1.39
LINC01960-201ENST00000563759 PTPRJQ12913 1337 aa23.76■■□□□ 1.39
LINC01960-201ENST00000563759 NPTXRO95502 500 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms