RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 DSG1Q02413 1049 aa4.51□□□□□ -1.69
DENND4A-205ENST00000562540 SQSTM1Q13501 440 aa4.51□□□□□ -1.69
DENND4A-205ENST00000562540 SPDYE7PQ495Y7 208 aa4.51□□□□□ -1.69
DENND4A-205ENST00000562540 GPR158Q5T848 1215 aa4.51□□□□□ -1.69
DENND4A-205ENST00000562540 METRNLQ641Q3 311 aa4.51□□□□□ -1.69
DENND4A-205ENST00000562540 PDZD4Q76G19 769 aaPredicted RBP4.51□□□□□ -1.69
DENND4A-205ENST00000562540 ARHGEF25Q86VW2 580 aa4.51□□□□□ -1.69
DENND4A-205ENST00000562540 KIF18BQ86Y91 864 aa4.51□□□□□ -1.69
DENND4A-205ENST00000562540 ZNF384Q8TF68 577 aa4.51□□□□□ -1.69
DENND4A-205ENST00000562540 CEP95Q96GE4 821 aa4.51□□□□□ -1.69
DENND4A-205ENST00000562540 PHACTR3Q96KR7 559 aa4.51□□□□□ -1.69
DENND4A-205ENST00000562540 Q96MF0 132 aa4.51□□□□□ -1.69
DENND4A-205ENST00000562540 MTFR1LQ9H019 292 aa4.51□□□□□ -1.69
DENND4A-205ENST00000562540 GPRC5DQ9NZD1 345 aa4.51□□□□□ -1.69
DENND4A-205ENST00000562540 RNF7Q9UBF6 113 aa4.51□□□□□ -1.69
DENND4A-205ENST00000562540 EVLQ9UI08 416 aaPredicted RBP4.51□□□□□ -1.69
DENND4A-205ENST00000562540 ATP11BQ9Y2G3 1177 aa4.51□□□□□ -1.69
DENND4A-205ENST00000562540 PPP2R3BQ9Y5P8 575 aa4.51□□□□□ -1.69
DENND4A-205ENST00000562540 NUMBLQ9Y6R0 609 aa4.51□□□□□ -1.69
DENND4A-205ENST00000562540 SALL3Q9BXA9 1300 aa4.5□□□□□ -1.69
DENND4A-205ENST00000562540 TMEM127O75204 238 aa4.5□□□□□ -1.69
DENND4A-205ENST00000562540 RBMXL2O75526 392 aaKnown RBP4.5□□□□□ -1.69
DENND4A-205ENST00000562540 MATN4O95460 622 aa4.5□□□□□ -1.69
DENND4A-205ENST00000562540 NEK4P51957 841 aa4.5□□□□□ -1.69
DENND4A-205ENST00000562540 SIM1P81133 766 aaPredicted RBP4.5□□□□□ -1.69
DENND4A-205ENST00000562540 NHLH1Q02575 133 aa4.5□□□□□ -1.69
DENND4A-205ENST00000562540 SCAPQ12770 1279 aa4.5□□□□□ -1.69
DENND4A-205ENST00000562540 PABPC4Q13310 644 aaKnown RBP eCLIP4.5□□□□□ -1.69
DENND4A-205ENST00000562540 ZNF169Q14929 603 aaPredicted RBP4.5□□□□□ -1.69
DENND4A-205ENST00000562540 C19orf54Q5BKX5 351 aa4.5□□□□□ -1.69
DENND4A-205ENST00000562540 PRAMEF14Q5SWL7 426 aa4.5□□□□□ -1.69
DENND4A-205ENST00000562540 AGAP9Q5VTM2 703 aa4.5□□□□□ -1.69
DENND4A-205ENST00000562540 ABHD15Q6UXT9 468 aa4.5□□□□□ -1.69
DENND4A-205ENST00000562540 Q6ZNX1 250 aa4.5□□□□□ -1.69
DENND4A-205ENST00000562540 GPR149Q86SP6 731 aa4.5□□□□□ -1.69
DENND4A-205ENST00000562540 SRRM1Q8IYB3 904 aaKnown RBP4.5□□□□□ -1.69
DENND4A-205ENST00000562540 OR56A1Q8NGH5 318 aa4.5□□□□□ -1.69
DENND4A-205ENST00000562540 SNX33Q8WV41 574 aa4.5□□□□□ -1.69
DENND4A-205ENST00000562540 RSAD2Q8WXG1 361 aa4.5□□□□□ -1.69
DENND4A-205ENST00000562540 SMG7Q92540 1137 aaKnown RBP4.5□□□□□ -1.69
DENND4A-205ENST00000562540 MS4A5Q9H3V2 200 aa4.5□□□□□ -1.69
DENND4A-205ENST00000562540 PRSS50Q9UI38 385 aa4.5□□□□□ -1.69
DENND4A-205ENST00000562540 NOX1Q9Y5S8 564 aa4.5□□□□□ -1.69
DENND4A-205ENST00000562540 POLR2AP24928 1970 aaKnown RBP4.49□□□□□ -1.69
DENND4A-205ENST00000562540 DRGXA6NNA5 263 aa4.49□□□□□ -1.69
DENND4A-205ENST00000562540 MGST3O14880 152 aa4.49□□□□□ -1.69
DENND4A-205ENST00000562540 RFPL3O75679 317 aa4.49□□□□□ -1.69
DENND4A-205ENST00000562540 ASMTLO95671 621 aa4.49□□□□□ -1.69
DENND4A-205ENST00000562540 GASTP01350 101 aa4.49□□□□□ -1.69
DENND4A-205ENST00000562540 LSP1P33241 339 aa4.49□□□□□ -1.69
DENND4A-205ENST00000562540 PHC1P78364 1004 aa4.49□□□□□ -1.69
DENND4A-205ENST00000562540 FOXF2Q12947 444 aa4.49□□□□□ -1.69
DENND4A-205ENST00000562540 MFSD14BQ5SR56 506 aa4.49□□□□□ -1.69
DENND4A-205ENST00000562540 ATXN7L2Q5T6C5 722 aaPredicted RBP4.49□□□□□ -1.69
DENND4A-205ENST00000562540 MICALCLQ6ZW33 695 aa4.49□□□□□ -1.69
DENND4A-205ENST00000562540 MAPKAPK5Q8IW41 473 aa4.49□□□□□ -1.69
DENND4A-205ENST00000562540 RHOT2Q8IXI1 618 aa4.49□□□□□ -1.69
DENND4A-205ENST00000562540 ZNF610Q8N9Z0 462 aa4.49□□□□□ -1.69
DENND4A-205ENST00000562540 OR14C36Q8NHC7 312 aa4.49□□□□□ -1.69
DENND4A-205ENST00000562540 SH3TC2Q8TF17 1288 aa4.49□□□□□ -1.69
DENND4A-205ENST00000562540 ZNF480Q8WV37 535 aa4.49□□□□□ -1.69
DENND4A-205ENST00000562540 RNF31Q96EP0 1072 aa4.49□□□□□ -1.69
DENND4A-205ENST00000562540 ALOXE3Q9BYJ1 711 aa4.49□□□□□ -1.69
DENND4A-205ENST00000562540 ANO3Q9BYT9 981 aa4.49□□□□□ -1.69
DENND4A-205ENST00000562540 WNT8AQ9H1J5 351 aa4.49□□□□□ -1.69
DENND4A-205ENST00000562540 SEMA4GQ9NTN9 838 aa4.49□□□□□ -1.69
DENND4A-205ENST00000562540 LRIT1Q9P2V4 623 aa4.49□□□□□ -1.69
DENND4A-205ENST00000562540 TMPRSS11EQ9UL52 423 aa4.49□□□□□ -1.69
DENND4A-205ENST00000562540 CANXP27824 592 aaKnown RBP4.48□□□□□ -1.69
DENND4A-205ENST00000562540 ABCG1P45844 678 aa4.48□□□□□ -1.69
DENND4A-205ENST00000562540 FLT3LGP49771 235 aa4.48□□□□□ -1.69
DENND4A-205ENST00000562540 MANFP55145 182 aaKnown RBP4.48□□□□□ -1.69
DENND4A-205ENST00000562540 TRIM25Q14258 630 aaKnown RBP4.48□□□□□ -1.69
DENND4A-205ENST00000562540 NOP9Q86U38 636 aaKnown RBP4.48□□□□□ -1.69
DENND4A-205ENST00000562540 TMEM132CQ8N3T6 1108 aa4.48□□□□□ -1.69
DENND4A-205ENST00000562540 SLC35B2Q8TB61 432 aa4.48□□□□□ -1.69
DENND4A-205ENST00000562540 GPR101Q96P66 508 aaPredicted RBP4.48□□□□□ -1.69
DENND4A-205ENST00000562540 SLC29A3Q9BZD2 475 aa4.48□□□□□ -1.69
DENND4A-205ENST00000562540 CASS4Q9NQ75 786 aa4.48□□□□□ -1.69
DENND4A-205ENST00000562540 KLHL11Q9NVR0 708 aa4.48□□□□□ -1.69
DENND4A-205ENST00000562540 TBCCD1Q9NVR7 557 aa4.48□□□□□ -1.69
DENND4A-205ENST00000562540 DNAJC9-AS1A6NH13 148 aa4.47□□□□□ -1.69
DENND4A-205ENST00000562540 PJA2O43164 708 aa4.47□□□□□ -1.69
DENND4A-205ENST00000562540 C1QL1O75973 258 aa4.47□□□□□ -1.69
DENND4A-205ENST00000562540 ELANEP08246 267 aa4.47□□□□□ -1.69
DENND4A-205ENST00000562540 CTSSP25774 331 aa4.47□□□□□ -1.69
DENND4A-205ENST00000562540 CRHR1P34998 444 aa4.47□□□□□ -1.69
DENND4A-205ENST00000562540 RARRES1P49788 294 aa4.47□□□□□ -1.69
DENND4A-205ENST00000562540 CACNA2D1P54289 1103 aa4.47□□□□□ -1.69
DENND4A-205ENST00000562540 CLRN1P58418 232 aa4.47□□□□□ -1.69
DENND4A-205ENST00000562540 RAP2BP61225 183 aa4.47□□□□□ -1.69
DENND4A-205ENST00000562540 MRPS35P82673 323 aaKnown RBP4.47□□□□□ -1.69
DENND4A-205ENST00000562540 OCRLQ01968 901 aa4.47□□□□□ -1.69
DENND4A-205ENST00000562540 SART3Q15020 963 aaKnown RBP4.47□□□□□ -1.69
DENND4A-205ENST00000562540 TSHZ3Q63HK5 1081 aa4.47□□□□□ -1.69
DENND4A-205ENST00000562540 B3GNTL1Q67FW5 361 aaPredicted RBP4.47□□□□□ -1.69
DENND4A-205ENST00000562540 FRMD7Q6ZUT3 714 aa4.47□□□□□ -1.69
DENND4A-205ENST00000562540 JAZF1Q86VZ6 243 aa4.47□□□□□ -1.69
DENND4A-205ENST00000562540 LYSMD2Q8IV50 215 aa4.47□□□□□ -1.69
DENND4A-205ENST00000562540 ACTRT2Q8TDY3 377 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms