RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 MFSD5Q6N075 450 aa12.7□□□□□ -0.38
HERC1-214ENST00000561400 C11orf57Q6ZUT1 292 aaPredicted RBP12.7□□□□□ -0.38
HERC1-214ENST00000561400 SYCP3Q8IZU3 236 aa12.7□□□□□ -0.38
HERC1-214ENST00000561400 KCNV2Q8TDN2 545 aa12.7□□□□□ -0.38
HERC1-214ENST00000561400 ZBTB45Q96K62 511 aaPredicted RBP12.7□□□□□ -0.38
HERC1-214ENST00000561400 MED15Q96RN5 788 aa12.7□□□□□ -0.38
HERC1-214ENST00000561400 MRPL4Q9BYD3 311 aaKnown RBP12.7□□□□□ -0.38
HERC1-214ENST00000561400 TMEM206Q9H813 350 aa12.7□□□□□ -0.38
HERC1-214ENST00000561400 AGPAT5Q9NUQ2 364 aa12.7□□□□□ -0.38
HERC1-214ENST00000561400 CXCL10P02778 98 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 CCDC192P0DO97 292 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 TCTN1Q2MV58 587 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 PLEKHG4Q58EX7 1191 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 MFSD4BQ5TF39 518 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 EEF1DP3Q658K8 133 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 CENPPQ6IPU0 288 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 DEFB128Q7Z7B8 93 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 PACS2Q86VP3 889 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 MICALL1Q8N3F8 863 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 DBF4BQ8NFT6 615 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 BICD1Q96G01 975 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 FAXDC2Q96IV6 333 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 HAPLN2Q9GZV7 340 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 GBP3Q9H0R5 595 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 ANO10Q9NW15 660 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 PRKAG2Q9UGJ0 569 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 ZMYND8Q9ULU4 1186 aaPredicted RBP12.69□□□□□ -0.38
HERC1-214ENST00000561400 PIN4Q9Y237 131 aaKnown RBP12.69□□□□□ -0.38
HERC1-214ENST00000561400 A0A1B0GUA9 196 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 TRIM49BA6NDI0 452 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 ABLIM1O14639 778 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 MGEA5O60502 916 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 PARNO95453 639 aaKnown RBP12.69□□□□□ -0.38
HERC1-214ENST00000561400 SETSIPP0DME0 302 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 NAT1P18440 290 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 ADSSP30520 456 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 LIG4P49917 911 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 STIM1Q13586 685 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 ZCWPW2Q504Y3 356 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 ATF7IP2Q5U623 682 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 ZPBP2Q6X784 338 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 BADQ92934 168 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 DNAJC25Q9H1X3 360 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 PTPRHQ9HD43 1115 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 EXOC7Q9UPT5 735 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 MICAL3Q7RTP6 2002 aa12.69□□□□□ -0.38
HERC1-214ENST00000561400 PSMA7O14818 248 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 PROZP22891 400 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 STX17P56962 302 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 ANO6Q4KMQ2 910 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 AP1ARQ63HQ0 302 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 ANKRD40Q6AI12 368 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 NELFBQ8WX92 580 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 P2RX5Q93086 422 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 DHTKD1Q96HY7 919 aaPredicted RBP12.68□□□□□ -0.38
HERC1-214ENST00000561400 PDZD7Q9H5P4 517 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 TYW1Q9NV66 732 aaKnown RBP12.68□□□□□ -0.38
HERC1-214ENST00000561400 CTNND2Q9UQB3 1225 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 TNFSF13BQ9Y275 285 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 PDXKO00764 312 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 CLIC2O15247 247 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 TOM1L1O75674 476 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 CCNE1P24864 410 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 AXLP30530 894 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 PPP1R2P41236 205 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 DSC3Q14574 896 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 NAIF1Q69YI7 327 aaPredicted RBP12.68□□□□□ -0.38
HERC1-214ENST00000561400 NOTUMQ6P988 496 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 SRLQ86TD4 932 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 RTN4RL1Q86UN2 441 aaPredicted RBP12.68□□□□□ -0.38
HERC1-214ENST00000561400 TXLNBQ8N3L3 684 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 TMEM199Q8N511 208 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 ARPC5LQ9BPX5 153 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 CBWD1Q9BRT8 395 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 TACO1Q9BSH4 297 aaKnown RBP12.68□□□□□ -0.38
HERC1-214ENST00000561400 AGPAT3Q9NRZ7 376 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 ANKFY1Q9P2R3 1169 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 TRAF3IP3Q9Y228 551 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 STYXL1Q9Y6J8 313 aa12.68□□□□□ -0.38
HERC1-214ENST00000561400 TRIP11Q15643 1979 aa12.67□□□□□ -0.38
HERC1-214ENST00000561400 RFC2P35250 354 aa12.67□□□□□ -0.38
HERC1-214ENST00000561400 NAP1L1P55209 391 aaKnown RBP12.67□□□□□ -0.38
HERC1-214ENST00000561400 ZNF445P59923 1031 aa12.67□□□□□ -0.38
HERC1-214ENST00000561400 NCBP1Q09161 790 aaKnown RBP12.67□□□□□ -0.38
HERC1-214ENST00000561400 FOXD4Q12950 439 aaPredicted RBP12.67□□□□□ -0.38
HERC1-214ENST00000561400 PAK1Q13153 545 aa12.67□□□□□ -0.38
HERC1-214ENST00000561400 UBXN11Q5T124 520 aa12.67□□□□□ -0.38
HERC1-214ENST00000561400 TTI2Q6NXR4 508 aa12.67□□□□□ -0.38
HERC1-214ENST00000561400 LRSAM1Q6UWE0 723 aa12.67□□□□□ -0.38
HERC1-214ENST00000561400 APBB1IPQ7Z5R6 666 aaPredicted RBP12.67□□□□□ -0.38
HERC1-214ENST00000561400 ZSWIM2Q8NEG5 633 aa12.67□□□□□ -0.38
HERC1-214ENST00000561400 LINC01599Q8WXQ3 324 aa12.67□□□□□ -0.38
HERC1-214ENST00000561400 EEF2KMTQ96G04 330 aa12.67□□□□□ -0.38
HERC1-214ENST00000561400 EIF2AQ9BY44 585 aaKnown RBP12.67□□□□□ -0.38
HERC1-214ENST00000561400 CHST12Q9NRB3 414 aa12.67□□□□□ -0.38
HERC1-214ENST00000561400 CWC15Q9P013 229 aaKnown RBP12.67□□□□□ -0.38
HERC1-214ENST00000561400 LCMT1Q9UIC8 334 aa12.67□□□□□ -0.38
HERC1-214ENST00000561400 PCDHGA4Q9Y5G9 962 aa12.67□□□□□ -0.38
HERC1-214ENST00000561400 PDE4DIPQ5VU43 2346 aa12.67□□□□□ -0.38
HERC1-214ENST00000561400 A0A0B4J269 797 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms