RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 H0Y858 1186 aa29.87■■■□□ 2.37
SNRPA1-215ENST00000561187 N4BP1O75113 896 aaKnown RBP29.87■■■□□ 2.37
SNRPA1-215ENST00000561187 CYP11B2P19099 503 aa29.87■■■□□ 2.37
SNRPA1-215ENST00000561187 HSP90AA2PQ14568 343 aaPredicted RBP29.87■■■□□ 2.37
SNRPA1-215ENST00000561187 MAPK6Q16659 721 aa29.87■■■□□ 2.37
SNRPA1-215ENST00000561187 HAUS3Q68CZ6 603 aa29.87■■■□□ 2.37
SNRPA1-215ENST00000561187 TMEM105Q8N8V8 129 aa29.87■■■□□ 2.37
SNRPA1-215ENST00000561187 SMG7Q92540 1137 aaKnown RBP29.87■■■□□ 2.37
SNRPA1-215ENST00000561187 BHMT2Q9H2M3 363 aa29.87■■■□□ 2.37
SNRPA1-215ENST00000561187 CHST7Q9NS84 486 aa29.87■■■□□ 2.37
SNRPA1-215ENST00000561187 USP34Q70CQ2 3546 aa29.87■■■□□ 2.37
SNRPA1-215ENST00000561187 PTGESO14684 152 aa29.86■■■□□ 2.37
SNRPA1-215ENST00000561187 TGM5O43548 720 aa29.86■■■□□ 2.37
SNRPA1-215ENST00000561187 KIF4AO95239 1232 aa29.86■■■□□ 2.37
SNRPA1-215ENST00000561187 RBM25P49756 843 aaKnown RBP29.86■■■□□ 2.37
SNRPA1-215ENST00000561187 HMGN5P82970 282 aaKnown RBP29.86■■■□□ 2.37
SNRPA1-215ENST00000561187 RTP2Q5QGT7 225 aa29.86■■■□□ 2.37
SNRPA1-215ENST00000561187 CEP57Q86XR8 500 aa29.86■■■□□ 2.37
SNRPA1-215ENST00000561187 FLCNQ8NFG4 579 aa29.86■■■□□ 2.37
SNRPA1-215ENST00000561187 CCDC113Q9H0I3 377 aa29.86■■■□□ 2.37
SNRPA1-215ENST00000561187 NOL7Q9UMY1 257 aaKnown RBP29.86■■■□□ 2.37
SNRPA1-215ENST00000561187 CLUHO75153 1309 aa29.86■■■□□ 2.37
SNRPA1-215ENST00000561187 NAMPTP43490 491 aa29.85■■■□□ 2.37
SNRPA1-215ENST00000561187 TUSC3Q13454 348 aa29.85■■■□□ 2.37
SNRPA1-215ENST00000561187 FAM187BQ17R55 369 aa29.85■■■□□ 2.37
SNRPA1-215ENST00000561187 GLRA4Q5JXX5 417 aa29.85■■■□□ 2.37
SNRPA1-215ENST00000561187 ELMSAN1Q6PJG2 1045 aa29.85■■■□□ 2.37
SNRPA1-215ENST00000561187 ST13P5Q8NFI4 369 aaPredicted RBP29.85■■■□□ 2.37
SNRPA1-215ENST00000561187 CMASQ8NFW8 434 aaPredicted RBP29.85■■■□□ 2.37
SNRPA1-215ENST00000561187 RSAD2Q8WXG1 361 aa29.85■■■□□ 2.37
SNRPA1-215ENST00000561187 ATOH1Q92858 354 aaPredicted RBP29.85■■■□□ 2.37
SNRPA1-215ENST00000561187 ADPGKQ9BRR6 497 aa29.85■■■□□ 2.37
SNRPA1-215ENST00000561187 KCNK12Q9HB15 430 aa29.85■■■□□ 2.37
SNRPA1-215ENST00000561187 PIDD1Q9HB75 910 aa29.85■■■□□ 2.37
SNRPA1-215ENST00000561187 KIAA1024Q9UPX6 916 aa29.85■■■□□ 2.37
SNRPA1-215ENST00000561187 NARSO43776 548 aaKnown RBP29.84■■■□□ 2.37
SNRPA1-215ENST00000561187 ORC2Q13416 577 aaPredicted RBP29.84■■■□□ 2.37
SNRPA1-215ENST00000561187 SNX29Q8TEQ0 813 aa29.84■■■□□ 2.37
SNRPA1-215ENST00000561187 ZNF707Q96C28 371 aaPredicted RBP29.84■■■□□ 2.37
SNRPA1-215ENST00000561187 KIF2CQ99661 725 aa29.84■■■□□ 2.37
SNRPA1-215ENST00000561187 DDX19AQ9NUU7 478 aaKnown RBP29.84■■■□□ 2.37
SNRPA1-215ENST00000561187 LRWD1Q9UFC0 647 aa29.84■■■□□ 2.37
SNRPA1-215ENST00000561187 SF3B1O75533 1304 aaKnown RBP eCLIP29.84■■■□□ 2.371e-6■■■■■ 60.3
SNRPA1-215ENST00000561187 ZMYM2Q9UBW7 1377 aa29.83■■■□□ 2.37
SNRPA1-215ENST00000561187 PP2D1A8MPX8 630 aa29.83■■■□□ 2.37
SNRPA1-215ENST00000561187 GET4Q7L5D6 327 aaPredicted RBP29.83■■■□□ 2.37
SNRPA1-215ENST00000561187 IFT74Q96LB3 600 aa29.83■■■□□ 2.37
SNRPA1-215ENST00000561187 ZSCAN31Q96LW9 406 aaPredicted RBP29.83■■■□□ 2.37
SNRPA1-215ENST00000561187 MYADMQ96S97 322 aa29.83■■■□□ 2.37
SNRPA1-215ENST00000561187 WDR6Q9NNW5 1121 aaKnown RBP29.83■■■□□ 2.37
SNRPA1-215ENST00000561187 FBXL21Q9UKT6 434 aa29.83■■■□□ 2.37
SNRPA1-215ENST00000561187 PCDHB6Q9Y5E3 794 aa29.83■■■□□ 2.37
SNRPA1-215ENST00000561187 MYO15AQ9UKN7 3530 aa29.82■■■□□ 2.36
SNRPA1-215ENST00000561187 ACKR2O00590 384 aa29.82■■■□□ 2.36
SNRPA1-215ENST00000561187 THP07101 528 aa29.82■■■□□ 2.36
SNRPA1-215ENST00000561187 TDGQ13569 410 aa29.82■■■□□ 2.36
SNRPA1-215ENST00000561187 PPP2R5AQ15172 486 aa29.82■■■□□ 2.36
SNRPA1-215ENST00000561187 FAM171A1Q5VUB5 890 aa29.82■■■□□ 2.36
SNRPA1-215ENST00000561187 C4orf32Q8N8J7 132 aa29.82■■■□□ 2.36
SNRPA1-215ENST00000561187 SH2B1Q9NRF2 756 aaPredicted RBP29.82■■■□□ 2.36
SNRPA1-215ENST00000561187 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP29.82■■■□□ 2.36
SNRPA1-215ENST00000561187 DPP7Q9UHL4 492 aa29.82■■■□□ 2.36
SNRPA1-215ENST00000561187 GALR2O43603 387 aaPredicted RBP29.81■■■□□ 2.36
SNRPA1-215ENST00000561187 FXR2P51116 673 aaKnown RBP eCLIP29.81■■■□□ 2.36
SNRPA1-215ENST00000561187 DUSP12Q9UNI6 340 aa29.81■■■□□ 2.36
SNRPA1-215ENST00000561187 DOCK8Q8NF50 2099 aa29.8■■■□□ 2.36
SNRPA1-215ENST00000561187 TRAPPC10P48553 1259 aa29.8■■■□□ 2.36
SNRPA1-215ENST00000561187 TOB1P50616 345 aaPredicted RBP29.8■■■□□ 2.36
SNRPA1-215ENST00000561187 PTGDRQ13258 359 aa29.8■■■□□ 2.36
SNRPA1-215ENST00000561187 NT5DC1Q5TFE4 455 aa29.8■■■□□ 2.36
SNRPA1-215ENST00000561187 CWF19L1Q69YN2 538 aaKnown RBP29.8■■■□□ 2.36
SNRPA1-215ENST00000561187 ASTLQ6HA08 431 aaPredicted RBP29.8■■■□□ 2.36
SNRPA1-215ENST00000561187 STAMQ92783 540 aa29.8■■■□□ 2.36
SNRPA1-215ENST00000561187 TTPALQ9BTX7 342 aa29.8■■■□□ 2.36
SNRPA1-215ENST00000561187 NT5C3AQ9H0P0 336 aa29.8■■■□□ 2.36
SNRPA1-215ENST00000561187 FNIP2Q9P278 1114 aa29.8■■■□□ 2.36
SNRPA1-215ENST00000561187 MTCL1Q9Y4B5 1905 aaKnown RBP29.8■■■□□ 2.36
SNRPA1-215ENST00000561187 E9PMD0 336 aa29.79■■■□□ 2.36
SNRPA1-215ENST00000561187 CFHP08603 1231 aa29.79■■■□□ 2.36
SNRPA1-215ENST00000561187 IGFBP6P24592 240 aaPredicted RBP29.79■■■□□ 2.36
SNRPA1-215ENST00000561187 CDC25AP30304 524 aa29.79■■■□□ 2.36
SNRPA1-215ENST00000561187 PSMD5Q16401 504 aa29.79■■■□□ 2.36
SNRPA1-215ENST00000561187 ATF7IP2Q5U623 682 aa29.79■■■□□ 2.36
SNRPA1-215ENST00000561187 SIX5Q8N196 739 aa29.79■■■□□ 2.36
SNRPA1-215ENST00000561187 PLEKHA4Q9H4M7 779 aa29.79■■■□□ 2.36
SNRPA1-215ENST00000561187 DOCK6Q96HP0 2047 aa29.78■■■□□ 2.36
SNRPA1-215ENST00000561187 CCDC169A6NNP5 214 aa29.78■■■□□ 2.36
SNRPA1-215ENST00000561187 CREMQ03060 361 aa29.78■■■□□ 2.36
SNRPA1-215ENST00000561187 ZRSR1Q15695 479 aaKnown RBP29.78■■■□□ 2.36
SNRPA1-215ENST00000561187 NAB2Q15742 525 aa29.78■■■□□ 2.36
SNRPA1-215ENST00000561187 DCAF4L1Q3SXM0 396 aa29.78■■■□□ 2.36
SNRPA1-215ENST00000561187 C8orf34Q49A92 452 aa29.78■■■□□ 2.36
SNRPA1-215ENST00000561187 CEP120Q8N960 986 aa29.78■■■□□ 2.36
SNRPA1-215ENST00000561187 KIFAP3Q92845 792 aa29.78■■■□□ 2.36
SNRPA1-215ENST00000561187 GOLGA2P5Q9HBQ8 144 aa29.78■■■□□ 2.36
SNRPA1-215ENST00000561187 VWA8A3KMH1 1905 aa29.78■■■□□ 2.36
SNRPA1-215ENST00000561187 ADAM12O43184 909 aa29.77■■■□□ 2.36
SNRPA1-215ENST00000561187 PEX3P56589 373 aa29.77■■■□□ 2.36
SNRPA1-215ENST00000561187 OSTNP61366 133 aa29.77■■■□□ 2.36
SNRPA1-215ENST00000561187 LILRA6Q6PI73 481 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms