RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 MRPS9P82933 396 aaKnown RBP17.79■□□□□ 0.44
SPG11-215ENST00000559193 CDR2Q01850 454 aa17.79■□□□□ 0.44
SPG11-215ENST00000559193 AUHQ13825 339 aaKnown RBP17.79■□□□□ 0.44
SPG11-215ENST00000559193 CROCCP2Q86T23 111 aa17.79■□□□□ 0.44
SPG11-215ENST00000559193 CCDC197Q8NCU1 140 aa17.79■□□□□ 0.44
SPG11-215ENST00000559193 P3H4Q92791 437 aa17.79■□□□□ 0.44
SPG11-215ENST00000559193 CCDC127Q96BQ5 260 aa17.79■□□□□ 0.44
SPG11-215ENST00000559193 SAAL1Q96ER3 474 aa17.79■□□□□ 0.44
SPG11-215ENST00000559193 POP1Q99575 1024 aaKnown RBP17.79■□□□□ 0.44
SPG11-215ENST00000559193 HAUS2Q9NVX0 235 aa17.79■□□□□ 0.44
SPG11-215ENST00000559193 UVRAGQ9P2Y5 699 aa17.79■□□□□ 0.44
SPG11-215ENST00000559193 TP73O15350 636 aa17.78■□□□□ 0.44
SPG11-215ENST00000559193 ATP2C2O75185 946 aa17.78■□□□□ 0.44
SPG11-215ENST00000559193 DLATP10515 647 aaKnown RBP17.78■□□□□ 0.44
SPG11-215ENST00000559193 ZNF568Q3ZCX4 644 aa17.78■□□□□ 0.44
SPG11-215ENST00000559193 LRRC34Q8IZ02 419 aa17.78■□□□□ 0.44
SPG11-215ENST00000559193 C7orf43Q8WVR3 580 aa17.78■□□□□ 0.44
SPG11-215ENST00000559193 DDX1Q92499 740 aaKnown RBP17.78■□□□□ 0.44
SPG11-215ENST00000559193 ELMO3Q96BJ8 720 aa17.78■□□□□ 0.44
SPG11-215ENST00000559193 HVCN1Q96D96 273 aa17.78■□□□□ 0.44
SPG11-215ENST00000559193 KDM4CQ9H3R0 1056 aa17.78■□□□□ 0.44
SPG11-215ENST00000559193 LRRC19Q9H756 370 aa17.78■□□□□ 0.44
SPG11-215ENST00000559193 CD248Q9HCU0 757 aa17.78■□□□□ 0.44
SPG11-215ENST00000559193 TOPORSQ9NS56 1045 aaPredicted RBP17.78■□□□□ 0.44
SPG11-215ENST00000559193 INTS9Q9NV88 658 aaKnown RBP17.78■□□□□ 0.44
SPG11-215ENST00000559193 BRWD3Q6RI45 1802 aa17.78■□□□□ 0.44
SPG11-215ENST00000559193 TULP1O00294 542 aaPredicted RBP17.78■□□□□ 0.44
SPG11-215ENST00000559193 RASGRF2O14827 1237 aa17.78■□□□□ 0.44
SPG11-215ENST00000559193 CLDN3O15551 220 aa17.78■□□□□ 0.44
SPG11-215ENST00000559193 ECEL1O95672 775 aa17.78■□□□□ 0.44
SPG11-215ENST00000559193 GHRP10912 638 aa17.78■□□□□ 0.44
SPG11-215ENST00000559193 PDE6CP51160 858 aa17.78■□□□□ 0.44
SPG11-215ENST00000559193 MKRN4PQ13434 485 aaPredicted RBP17.78■□□□□ 0.44
SPG11-215ENST00000559193 LLGL1Q15334 1064 aa17.78■□□□□ 0.44
SPG11-215ENST00000559193 KRT39Q6A163 491 aa17.78■□□□□ 0.44
SPG11-215ENST00000559193 MIGA2Q7L4E1 593 aa17.78■□□□□ 0.44
SPG11-215ENST00000559193 TRMT1LQ7Z2T5 733 aaKnown RBP17.78■□□□□ 0.44
SPG11-215ENST00000559193 FUKQ8N0W3 1084 aa17.78■□□□□ 0.44
SPG11-215ENST00000559193 PLCD3Q8N3E9 789 aa17.78■□□□□ 0.44
SPG11-215ENST00000559193 PRMT1Q99873 361 aaKnown RBP17.78■□□□□ 0.44
SPG11-215ENST00000559193 TAOK3Q9H2K8 898 aa17.78■□□□□ 0.44
SPG11-215ENST00000559193 CCDC134Q9H6E4 229 aa17.78■□□□□ 0.44
SPG11-215ENST00000559193 COQ4Q9Y3A0 265 aa17.78■□□□□ 0.44
SPG11-215ENST00000559193 ASAP2O43150 1006 aa17.77■□□□□ 0.44
SPG11-215ENST00000559193 PPIP5K2O43314 1243 aa17.77■□□□□ 0.44
SPG11-215ENST00000559193 GPC3P51654 580 aa17.77■□□□□ 0.44
SPG11-215ENST00000559193 PIGWQ7Z7B1 504 aa17.77■□□□□ 0.44
SPG11-215ENST00000559193 CCDC25Q86WR0 208 aa17.77■□□□□ 0.44
SPG11-215ENST00000559193 PARD3BQ8TEW8 1205 aa17.77■□□□□ 0.44
SPG11-215ENST00000559193 DHX38Q92620 1227 aaKnown RBP17.77■□□□□ 0.44
SPG11-215ENST00000559193 KIFC3Q9BVG8 833 aa17.77■□□□□ 0.44
SPG11-215ENST00000559193 AAASQ9NRG9 546 aa17.77■□□□□ 0.44
SPG11-215ENST00000559193 ZNFX1Q9P2E3 1918 aaKnown RBP17.77■□□□□ 0.43
SPG11-215ENST00000559193 GRIN3BO60391 1043 aa17.77■□□□□ 0.43
SPG11-215ENST00000559193 MTMR1Q13613 665 aa17.77■□□□□ 0.43
SPG11-215ENST00000559193 PCNX4Q63HM2 1172 aa17.77■□□□□ 0.43
SPG11-215ENST00000559193 PLA2G4FQ68DD2 849 aa17.77■□□□□ 0.43
SPG11-215ENST00000559193 MFSD5Q6N075 450 aa17.77■□□□□ 0.43
SPG11-215ENST00000559193 CYB5D1Q6P9G0 228 aa17.77■□□□□ 0.43
SPG11-215ENST00000559193 TAS1R2Q8TE23 839 aa17.77■□□□□ 0.43
SPG11-215ENST00000559193 IWS1Q96ST2 819 aa17.77■□□□□ 0.43
SPG11-215ENST00000559193 DDX23Q9BUQ8 820 aaKnown RBP17.77■□□□□ 0.43
SPG11-215ENST00000559193 TMEM8AQ9HCN3 771 aa17.77■□□□□ 0.43
SPG11-215ENST00000559193 A1CFQ9NQ94 594 aaKnown RBP17.77■□□□□ 0.43
SPG11-215ENST00000559193 CCT8L1PA6NM43 557 aa17.76■□□□□ 0.43
SPG11-215ENST00000559193 FSCN2O14926 492 aa17.76■□□□□ 0.43
SPG11-215ENST00000559193 PDE4CQ08493 712 aa17.76■□□□□ 0.43
SPG11-215ENST00000559193 PPP1R7Q15435 360 aa17.76■□□□□ 0.43
SPG11-215ENST00000559193 CCDC38Q502W7 563 aa17.76■□□□□ 0.43
SPG11-215ENST00000559193 FAM102BQ5T8I3 360 aa17.76■□□□□ 0.43
SPG11-215ENST00000559193 TMEM161BQ8NDZ6 487 aa17.76■□□□□ 0.43
SPG11-215ENST00000559193 C1orf54Q8WWF1 131 aa17.76■□□□□ 0.43
SPG11-215ENST00000559193 TIPINQ9BVW5 301 aa17.76■□□□□ 0.43
SPG11-215ENST00000559193 TMEM39BQ9GZU3 492 aa17.76■□□□□ 0.43
SPG11-215ENST00000559193 YY1AP1Q9H869 796 aa17.76■□□□□ 0.43
SPG11-215ENST00000559193 QTRT2Q9H974 415 aaKnown RBP17.76■□□□□ 0.43
SPG11-215ENST00000559193 TBX20Q9UMR3 447 aa17.76■□□□□ 0.43
SPG11-215ENST00000559193 KRT17Q04695 432 aa17.76■□□□□ 0.43
SPG11-215ENST00000559193 SF3A3Q12874 501 aaKnown RBP eCLIP17.76■□□□□ 0.43
SPG11-215ENST00000559193 XRCC4Q13426 336 aa17.76■□□□□ 0.43
SPG11-215ENST00000559193 ACAD10Q6JQN1 1059 aa17.76■□□□□ 0.43
SPG11-215ENST00000559193 MAP4K3Q8IVH8 894 aa17.76■□□□□ 0.43
SPG11-215ENST00000559193 C4orf19Q8IY42 314 aa17.76■□□□□ 0.43
SPG11-215ENST00000559193 SLCO2A1Q92959 643 aa17.76■□□□□ 0.43
SPG11-215ENST00000559193 NT5C1BQ96P26 610 aa17.76■□□□□ 0.43
SPG11-215ENST00000559193 STMN4Q9H169 189 aaPredicted RBP17.76■□□□□ 0.43
SPG11-215ENST00000559193 CDC42EP4Q9H3Q1 356 aaKnown RBP17.76■□□□□ 0.43
SPG11-215ENST00000559193 CHUKO15111 745 aa17.75■□□□□ 0.43
SPG11-215ENST00000559193 DNAJC8O75937 253 aaPredicted RBP17.75■□□□□ 0.43
SPG11-215ENST00000559193 CALCAP01258 141 aa17.75■□□□□ 0.43
SPG11-215ENST00000559193 CALCOCO2Q13137 446 aa17.75■□□□□ 0.43
SPG11-215ENST00000559193 CNGA2Q16280 664 aa17.75■□□□□ 0.43
SPG11-215ENST00000559193 SPDYE2Q495Y8 402 aa17.75■□□□□ 0.43
SPG11-215ENST00000559193 TRMT10CQ7L0Y3 403 aaKnown RBP17.75■□□□□ 0.43
SPG11-215ENST00000559193 ZKSCAN4Q969J2 545 aaPredicted RBP17.75■□□□□ 0.43
SPG11-215ENST00000559193 SGSM3Q96HU1 749 aa17.75■□□□□ 0.43
SPG11-215ENST00000559193 CNGA1P29973 690 aa17.75■□□□□ 0.43
SPG11-215ENST00000559193 IFNAR2P48551 515 aa17.75■□□□□ 0.43
SPG11-215ENST00000559193 ITIH4Q14624 930 aa17.75■□□□□ 0.43
SPG11-215ENST00000559193 DLGAP5Q15398 846 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms