RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 PLEKHO2Q8TD55 490 aa19.67■□□□□ 0.74
CLPX-203ENST00000558958 SLC35C1Q96A29 364 aa19.67■□□□□ 0.74
CLPX-203ENST00000558958 TRIM5Q9C035 493 aa19.67■□□□□ 0.74
CLPX-203ENST00000558958 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.67■□□□□ 0.74
CLPX-203ENST00000558958 KIAA0355O15063 1070 aa19.66■□□□□ 0.74
CLPX-203ENST00000558958 MGEA5O60502 916 aa19.66■□□□□ 0.74
CLPX-203ENST00000558958 CLTAP09496 248 aa19.66■□□□□ 0.74
CLPX-203ENST00000558958 STAG3L1P0CL83 205 aa19.66■□□□□ 0.74
CLPX-203ENST00000558958 ZSCAN20P17040 1043 aaPredicted RBP19.66■□□□□ 0.74
CLPX-203ENST00000558958 GRM5P41594 1212 aa19.66■□□□□ 0.74
CLPX-203ENST00000558958 VAMP7P51809 220 aa19.66■□□□□ 0.74
CLPX-203ENST00000558958 CCL23P55773 120 aa19.66■□□□□ 0.74
CLPX-203ENST00000558958 POU5F1Q01860 360 aaKnown RBP19.66■□□□□ 0.74
CLPX-203ENST00000558958 PPP2R3AQ06190 1150 aa19.66■□□□□ 0.74
CLPX-203ENST00000558958 VWA3BQ502W6 1294 aa19.66■□□□□ 0.74
CLPX-203ENST00000558958 BRSK2Q8IWQ3 736 aa19.66■□□□□ 0.74
CLPX-203ENST00000558958 TMC2Q8TDI7 906 aa19.66■□□□□ 0.74
CLPX-203ENST00000558958 PARD3BQ8TEW8 1205 aa19.66■□□□□ 0.74
CLPX-203ENST00000558958 SCLYQ96I15 445 aa19.66■□□□□ 0.74
CLPX-203ENST00000558958 TRIM6Q9C030 488 aaPredicted RBP19.66■□□□□ 0.74
CLPX-203ENST00000558958 XPO4Q9C0E2 1151 aaKnown RBP19.66■□□□□ 0.74
CLPX-203ENST00000558958 RTN4Q9NQC3 1192 aaKnown RBP19.66■□□□□ 0.74
CLPX-203ENST00000558958 RBAKQ9NYW8 714 aaPredicted RBP19.66■□□□□ 0.74
CLPX-203ENST00000558958 TRIM43BA6NCK2 446 aa19.65■□□□□ 0.74
CLPX-203ENST00000558958 TPM2P07951 284 aa19.65■□□□□ 0.74
CLPX-203ENST00000558958 OSTNP61366 133 aa19.65■□□□□ 0.74
CLPX-203ENST00000558958 NR1I3Q14994 352 aa19.65■□□□□ 0.74
CLPX-203ENST00000558958 PSMD6Q15008 389 aa19.65■□□□□ 0.74
CLPX-203ENST00000558958 ENOX2Q16206 610 aaKnown RBP19.65■□□□□ 0.74
CLPX-203ENST00000558958 FILIP1LQ4L180 1135 aa19.65■□□□□ 0.74
CLPX-203ENST00000558958 PLEKHG4Q58EX7 1191 aa19.65■□□□□ 0.74
CLPX-203ENST00000558958 DCAF17Q5H9S7 520 aaPredicted RBP19.65■□□□□ 0.74
CLPX-203ENST00000558958 FAM43BQ6ZT52 329 aaPredicted RBP19.65■□□□□ 0.74
CLPX-203ENST00000558958 TMEM192Q8IY95 271 aa19.65■□□□□ 0.74
CLPX-203ENST00000558958 TRIM43Q96BQ3 446 aaPredicted RBP19.65■□□□□ 0.74
CLPX-203ENST00000558958 TRAIPQ9BWF2 469 aa19.65■□□□□ 0.74
CLPX-203ENST00000558958 NDST4Q9H3R1 872 aa19.65■□□□□ 0.74
CLPX-203ENST00000558958 INTS13Q9NVM9 706 aa19.65■□□□□ 0.74
CLPX-203ENST00000558958 LGALS16A8MUM7 142 aa19.64■□□□□ 0.73
CLPX-203ENST00000558958 CBFA2T2O43439 604 aa19.64■□□□□ 0.73
CLPX-203ENST00000558958 TIMP1P01033 207 aa19.64■□□□□ 0.73
CLPX-203ENST00000558958 CXCL10P02778 98 aa19.64■□□□□ 0.73
CLPX-203ENST00000558958 ZNF75DP51815 510 aa19.64■□□□□ 0.73
CLPX-203ENST00000558958 WNT7BP56706 349 aa19.64■□□□□ 0.73
CLPX-203ENST00000558958 DLG4P78352 724 aa19.64■□□□□ 0.73
CLPX-203ENST00000558958 KCNH2Q12809 1159 aa19.64■□□□□ 0.73
CLPX-203ENST00000558958 C1orf220Q5T0J3 134 aa19.64■□□□□ 0.73
CLPX-203ENST00000558958 TCERG1LQ5VWI1 586 aa19.64■□□□□ 0.73
CLPX-203ENST00000558958 SMG8Q8ND04 991 aaKnown RBP19.64■□□□□ 0.73
CLPX-203ENST00000558958 CCDC127Q96BQ5 260 aa19.64■□□□□ 0.73
CLPX-203ENST00000558958 NXF3Q9H4D5 531 aaKnown RBP19.64■□□□□ 0.73
CLPX-203ENST00000558958 RPF1Q9H9Y2 349 aaKnown RBP19.64■□□□□ 0.73
CLPX-203ENST00000558958 PRDM5Q9NQX1 630 aaPredicted RBP19.64■□□□□ 0.73
CLPX-203ENST00000558958 TANC1Q9C0D5 1861 aa19.64■□□□□ 0.73
CLPX-203ENST00000558958 ADCY5O95622 1261 aa19.63■□□□□ 0.73
CLPX-203ENST00000558958 AFPP02771 609 aaKnown RBP19.63■□□□□ 0.73
CLPX-203ENST00000558958 TRIM49P0CI25 452 aa19.63■□□□□ 0.73
CLPX-203ENST00000558958 TRIM49CP0CI26 452 aa19.63■□□□□ 0.73
CLPX-203ENST00000558958 CXCL8P10145 99 aa19.63■□□□□ 0.73
CLPX-203ENST00000558958 CLDN10P78369 228 aa19.63■□□□□ 0.73
CLPX-203ENST00000558958 USP37Q86T82 979 aa19.63■□□□□ 0.73
CLPX-203ENST00000558958 DBF4BQ8NFT6 615 aa19.63■□□□□ 0.73
CLPX-203ENST00000558958 MRFAP1L1Q96HT8 127 aa19.63■□□□□ 0.73
CLPX-203ENST00000558958 ACAP3Q96P50 834 aa19.63■□□□□ 0.73
CLPX-203ENST00000558958 ADAM2Q99965 735 aa19.63■□□□□ 0.73
CLPX-203ENST00000558958 CCDC94Q9BW85 323 aaPredicted RBP19.63■□□□□ 0.73
CLPX-203ENST00000558958 FTHL17Q9BXU8 183 aa19.63■□□□□ 0.73
CLPX-203ENST00000558958 PDE11AQ9HCR9 933 aa19.63■□□□□ 0.73
CLPX-203ENST00000558958 FAM105AQ9NUU6 356 aa19.63■□□□□ 0.73
CLPX-203ENST00000558958 HES2Q9Y543 173 aa19.63■□□□□ 0.73
CLPX-203ENST00000558958 IPPQ9Y573 584 aa19.63■□□□□ 0.73
CLPX-203ENST00000558958 PCDHB2Q9Y5E7 798 aa19.63■□□□□ 0.73
CLPX-203ENST00000558958 LRRIQ3A6PVS8 624 aaPredicted RBP19.62■□□□□ 0.73
CLPX-203ENST00000558958 PES1O00541 588 aaKnown RBP19.62■□□□□ 0.73
CLPX-203ENST00000558958 MEFVO15553 781 aaPredicted RBP19.62■□□□□ 0.73
CLPX-203ENST00000558958 TEX33O43247 280 aa19.62■□□□□ 0.73
CLPX-203ENST00000558958 TPM3P06753 285 aa19.62■□□□□ 0.73
CLPX-203ENST00000558958 ITGB8P26012 769 aa19.62■□□□□ 0.73
CLPX-203ENST00000558958 RFC2P35250 354 aa19.62■□□□□ 0.73
CLPX-203ENST00000558958 SLC10A6Q3KNW5 377 aa19.62■□□□□ 0.73
CLPX-203ENST00000558958 SEPT8Q92599 483 aa19.62■□□□□ 0.73
CLPX-203ENST00000558958 APBB2Q92870 758 aa19.62■□□□□ 0.73
CLPX-203ENST00000558958 FNBP1Q96RU3 617 aa19.62■□□□□ 0.73
CLPX-203ENST00000558958 RGS18Q9NS28 235 aa19.62■□□□□ 0.73
CLPX-203ENST00000558958 SNTG2Q9NY99 539 aa19.62■□□□□ 0.73
CLPX-203ENST00000558958 A0A0U1RQF3 1178 aa19.61■□□□□ 0.73
CLPX-203ENST00000558958 ZNF623O75123 536 aa19.61■□□□□ 0.73
CLPX-203ENST00000558958 IL18RAPO95256 599 aa19.61■□□□□ 0.73
CLPX-203ENST00000558958 DLATP10515 647 aaKnown RBP19.61■□□□□ 0.73
CLPX-203ENST00000558958 RAB27AP51159 221 aa19.61■□□□□ 0.73
CLPX-203ENST00000558958 UBXN1Q04323 297 aa19.61■□□□□ 0.73
CLPX-203ENST00000558958 SURF1Q15526 300 aa19.61■□□□□ 0.73
CLPX-203ENST00000558958 MRPL10Q7Z7H8 261 aaKnown RBP19.61■□□□□ 0.73
CLPX-203ENST00000558958 RTN4RL1Q86UN2 441 aaPredicted RBP19.61■□□□□ 0.73
CLPX-203ENST00000558958 POP1Q99575 1024 aaKnown RBP19.61■□□□□ 0.73
CLPX-203ENST00000558958 TSPYL2Q9H2G4 693 aaPredicted RBP19.61■□□□□ 0.73
CLPX-203ENST00000558958 TTC26A0AVF1 554 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 LACTBL1A8MY62 500 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 STX10O60499 249 aa19.6■□□□□ 0.73
CLPX-203ENST00000558958 RAG1P15918 1043 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms